Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_G16
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0279 - 23794964-23795111,23795486-23795634,23796120-237962...    43   3e-04
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731...    42   5e-04
07_01_0849 + 6896930-6896996,6897453-6897474,6897615-6897690,689...    42   9e-04
07_01_1199 + 11391638-11391718,11393477-11393590,11393690-113938...    29   5.1  

>05_05_0279 -
           23794964-23795111,23795486-23795634,23796120-23796221,
           23796309-23796384,23796578-23796588
          Length = 161

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 25/62 (40%), Positives = 31/62 (50%)
 Frame = +3

Query: 81  KIGLCAYSGYKIYPGHGQDHGLXVDGKTFTFLNSKCEXRPFDEEESSVK*XGLSWYRRXF 260
           K  LC +SG KIYPG G    +  D + F F NSKC+ R F       K    + YR+  
Sbjct: 4   KTELCRFSGQKIYPGKG-IRFIRADSQVFLFANSKCK-RYFHNRLKPAKLTWTAMYRKQH 61

Query: 261 KK 266
           KK
Sbjct: 62  KK 63


>01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143,
            34673237-34675178,34675588-34675658,34676158-34676307,
            34676963-34677038,34677131-34677232,34677707-34677855,
            34678214-34678364
          Length = 1172

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 24/59 (40%), Positives = 30/59 (50%)
 Frame = +3

Query: 90   LCAYSGYKIYPGHGQDHGLXVDGKTFTFLNSKCEXRPFDEEESSVK*XGLSWYRRXFKK 266
            LC +SG KIYPG G    +  D + F F NSKC+ R F       K    + YR+  KK
Sbjct: 1017 LCRFSGQKIYPGKG-IRFIRADSQVFLFANSKCK-RYFHNRLKPAKLTWTAMYRKQHKK 1073


>07_01_0849 +
           6896930-6896996,6897453-6897474,6897615-6897690,
           6897775-6897876,6898156-6898304,6898637-6898784
          Length = 187

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 24/59 (40%), Positives = 30/59 (50%)
 Frame = +3

Query: 90  LCAYSGYKIYPGHGQDHGLXVDGKTFTFLNSKCEXRPFDEEESSVK*XGLSWYRRXFKK 266
           LC +SG KIYPG G    +  D + F F NSKC+ R F       K    + YR+  KK
Sbjct: 33  LCRFSGAKIYPGKG-IRFIRADSQVFLFSNSKCK-RYFHNRLKPAKLTWTAMYRKQHKK 89


>07_01_1199 +
           11391638-11391718,11393477-11393590,11393690-11393826,
           11393905-11394064
          Length = 163

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 93  CAYSGYKIYPGHGQDHGLXVDGKTFTFLNSKC 188
           C +    +YPGHG    +  D K F F  SKC
Sbjct: 6   CWFCSSTVYPGHGIQF-VRNDAKIFRFCRSKC 36


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,431,132
Number of Sequences: 37544
Number of extensions: 249225
Number of successful extensions: 325
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)