Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_G12
(915 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 43 5e-05
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 40 7e-04
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 33 0.043
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.099
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.17
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 31 0.17
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.40
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 29 0.70
SPAC23C11.01 |||ER membrane protein, ICE2 family|Schizosaccharom... 28 1.6
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.8
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.5
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 43.2 bits (97), Expect = 5e-05
Identities = 21/43 (48%), Positives = 21/43 (48%)
Frame = -2
Query: 782 GGGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGGG 654
GGG GG GGG G GGG G GG GGG GG G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/42 (47%), Positives = 20/42 (47%)
Frame = -2
Query: 779 GGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGGG 654
GG GG G GG G GGG G GG GGG GG G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Score = 39.5 bits (88), Expect = 7e-04
Identities = 21/44 (47%), Positives = 21/44 (47%)
Frame = -2
Query: 785 GGGGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGGG 654
G GG GG G GG G GGG G GG GGG GG G
Sbjct: 206 GFGGFGGFGGEGHHHGGHGGF-GGGPGGFEGGPGGFGGGPGGFG 248
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/43 (44%), Positives = 19/43 (44%)
Frame = -2
Query: 785 GGGGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGG 657
G GG GGG GG G GG G GG GG GGG
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 36.3 bits (80), Expect = 0.006
Identities = 21/47 (44%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -2
Query: 785 GGGGXGGGGXXXRXXGGGAGXRGG---GXXXXXGXXGGXGGGXGGGG 654
G GG GG G GG G GG G G GG GGG GG G
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Score = 35.9 bits (79), Expect = 0.008
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -2
Query: 785 GGGGXGGGGXXXRXXGGGAGXRGG--GXXXXXGXXGGXGGGXGG 660
G GG GGG GG G GG G G GG GGG GG
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 779 GGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGG 672
GG GG G GGG G GGG G GG GG
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 782 GGGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXG 675
GGG GG G GGG G GGG G GG G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGG----PGGHGGPG 272
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 740 GGGAGXRGGGXXXXXGXXGGXGGGXGGGG 654
GGG G GGG GG GG G GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGG 215
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 776 GXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGGG 654
G GGG G G G G G GG G GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHG 224
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 39.5 bits (88), Expect = 7e-04
Identities = 21/44 (47%), Positives = 21/44 (47%)
Frame = -2
Query: 785 GGGGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGGG 654
G GG GGG R GGG G GG G GG GG GG G
Sbjct: 24 GRGGFGGGRGGAR--GGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 779 GGXGG-GGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGGG 654
GG GG G GG G RGGG G GG GG GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/44 (45%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -2
Query: 785 GGGGXGGGGXXXRXXGGGAGXRG--GGXXXXXGXXGGXGGGXGG 660
GG G GGG GG G RG GG G GG GG GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -2
Query: 782 GGGXGGGGXXXRXXG-GGAGXRGGGXXXXXGXXGGXGGGXGG 660
GGG GG R GG G RGG G GG GG GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 33.1 bits (72), Expect = 0.057
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -2
Query: 782 GGGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGG 660
GG GG G GG G GG G GG GG GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 32.7 bits (71), Expect = 0.075
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 779 GGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGGG 654
GG GG GG G GGG G GG GG GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARG--GGRGGARGGRG 48
Score = 29.5 bits (63), Expect = 0.70
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -2
Query: 779 GGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGG 660
G GG G GG G RGG G G GGG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGG---FGGGRGGARGGGRGG 42
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 33.5 bits (73), Expect = 0.043
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -2
Query: 785 GGGGXGGGGXXXRXXGG-GAGXRGG-GXXXXXGXXGGXGGGXGGG 657
GG G GG GG G G RGG G G GG GG GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 33.1 bits (72), Expect = 0.057
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 776 GXGGGGXXXRXXGGGAGXRGG-GXXXXXGXXGGXGGGXGGG 657
G G G GG G RGG G G GG GG GGG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = -2
Query: 785 GGGGXGG--GGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGG 657
G GG GG GG G G RGG G GG GGG GG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGG---FGGGSRGGFGGGSRGG 177
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -2
Query: 785 GGGGXGGGGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGG 660
GG GG G R G G G RGG G GG GG G
Sbjct: 155 GGNSRGGFGGGSR-GGFGGGSRGGS---RGGFRGGSRGGFRG 192
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 749 RXXGGGAGXRGGGXXXXXGXXGGXGGGXGGG 657
R G G RGG G GG GG GG
Sbjct: 131 RNGPAGRGGRGGFRGGRGGSRGGFGGNSRGG 161
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.3 bits (70), Expect = 0.099
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +1
Query: 655 PPPPXPPPXPPXXPXXXXXXXXXXXXXXXXSRXXXPPPPXPP--PP 786
PPPP PP PP S+ PPPP P PP
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = +3
Query: 621 YTXXXXXXXXXXPPPPPPPXXPXXPPPXXXXXXXXXXXXXXXXXXXPPPPXPP 779
YT PPPPPP P PPPP P
Sbjct: 227 YTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATP 279
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 760 PPPPXPPPP 786
PPPP PPPP
Sbjct: 189 PPPPPPPPP 197
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 657 PPPPPPP 677
PPPPPPP
Sbjct: 189 PPPPPPP 195
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 657 PPPPPPP 677
PPPPPPP
Sbjct: 190 PPPPPPP 196
Score = 20.6 bits (41), Expect(2) = 5.8
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 759 PPPPXPP 779
PPPP PP
Sbjct: 190 PPPPPPP 196
Score = 20.6 bits (41), Expect(2) = 5.8
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 759 PPPPXPP 779
PPPP PP
Sbjct: 191 PPPPPPP 197
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -2
Query: 749 RXXGGGAGXRGG-GXXXXXGXXGGXGGGXGGG 657
R GG G RGG G G GG GGG G G
Sbjct: 444 RTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 785 GGGGXGG-GGXXXRXXGGGAGXRGGGXXXXXGXXGGXGGGXGGG 657
GGG GG GG R GG G GGG G G G G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG--RGRGRGGARSGNPNRG 487
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 278 AIAGPALINPSRTLRPTFSIFLKSFHLGSGAALTAP 171
AIA P +I+P ++RP S+F+KS A + +P
Sbjct: 202 AIADPNIISPIDSVRPLLSLFIKSITSAISALILSP 237
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 658 PPPXPPPXPPXXPXXXXXXXXXXXXXXXXSRXXXPPPPXPPPP 786
P P P P PP P + PPPP PPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGA---GPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 657 PPPPPPPXXPXXPPPXXXXXXXXXXXXXXXXXXXPPPPXPP 779
PPPPPP P P PPPP PP
Sbjct: 732 PPPPPPAVIVPTPAP----APIPVPPPAPIMGGPPPPPPPP 768
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 657 PPPPPPPXXPXXPPP 701
PPPPPPP PP
Sbjct: 762 PPPPPPPGVAGAGPP 776
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 657 PPPPPPPXXPXXPPP 701
PPPPPP PPP
Sbjct: 763 PPPPPPGVAGAGPPP 777
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 5/20 (25%)
Frame = +3
Query: 657 PPPPPPP-----XXPXXPPP 701
PPPPPPP P PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPP 780
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 29.5 bits (63), Expect = 0.70
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 395 LNSLKLEIHNYXQSCFKLNASLEFNDKVY 309
L L LEI N+ Q+ L +LE+ +KVY
Sbjct: 205 LGELSLEIENFSQASQDLKTALEWKEKVY 233
>SPAC23C11.01 |||ER membrane protein, ICE2
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -2
Query: 215 LKSFH-LGSGAALTAPRASTNAKTKLKIRTKFILPKFYSAGEFKIPIQYRSTRTLRMIKS 39
L+S H L S + T PR N + K + P ++ F+I + Y TR L I++
Sbjct: 291 LQSVHYLISTISATLPRTLYNIVLFMVAAAKTVAPSVFATFAFRISVMYAVTRILPAIQN 350
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 3/18 (16%)
Frame = +3
Query: 657 PPPPP---PPXXPXXPPP 701
PPPPP PP P PPP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 657 PPPPPPPXXPXXPPP 701
PPPPPP P PP
Sbjct: 11 PPPPPPGFEPPSQPP 25
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 5/49 (10%)
Frame = +1
Query: 655 PPPPXPPPXPPXXPXXXXXXXXXXXXXXXXSRXXX-----PPPPXPPPP 786
P PP PPP P + PPPP PPPP
Sbjct: 905 PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 760 PPPPXPPPP 786
PPPP PPPP
Sbjct: 306 PPPPPPPPP 314
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 657 PPPPPPP 677
PPPPPPP
Sbjct: 306 PPPPPPP 312
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 657 PPPPPPP 677
PPPPPPP
Sbjct: 307 PPPPPPP 313
Score = 20.6 bits (41), Expect(2) = 6.4
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 759 PPPPXPP 779
PPPP PP
Sbjct: 307 PPPPPPP 313
Score = 20.6 bits (41), Expect(2) = 6.4
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 759 PPPPXPP 779
PPPP PP
Sbjct: 308 PPPPPPP 314
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 657 PPPPPPPXXPXXPPP 701
PPPPPP P PP
Sbjct: 1882 PPPPPPMALPKAGPP 1896
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,575,767
Number of Sequences: 5004
Number of extensions: 47500
Number of successful extensions: 517
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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