Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_G07
(1072 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 1e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 40 6e-04
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.011
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.068
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.068
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 30 0.085
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.12
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.12
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.36
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.6
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 5.9
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 5.9
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.9
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 42.3 bits (95), Expect = 1e-04
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = +3
Query: 564 PPPXXKXGXXXXKXPPPPPPPPXXXGGGXRXXXPXP 671
PPP G PPPPPPPP GG R P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 39.9 bits (89), Expect = 6e-04
Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Frame = +1
Query: 856 KKKKKXXRXPXXPXPXXXXGGXXXGGXPXTXXPPFXXXPPPPPPXX------PPXPPPPP 1017
+++K + P P P P P PPPPPP PP PPPPP
Sbjct: 723 EQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Query: 1018 P 1020
P
Sbjct: 783 P 783
Score = 36.3 bits (80), Expect = 0.007
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 531 PXPXXXXXXRAPPPXXKXGXXXXKXPPPPPPPPXXXGGGXRXXXPXPPP 677
P P AP P PPPPPPP G P PPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.48
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 610 PPPXPPPXGXGXVGXXXXXXPPP 678
PPP PPP G G PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 970 PPPPPPXXPPXPPPPPPXXXXXTXRRXGXPXXSP 1071
PPPPP P P P P G P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +3
Query: 558 RAPPPXXKXGXXXXKXPPP-PPPPPXXXGGGXRXXXPXPPP 677
++PPP P P P PPP GG P PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGG--PPPPPPPP 768
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 970 PPPPPPXXPPXPPPPPPXXXXXTXRRXGXPXXSP 1071
PPPPPP P P P G P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +2
Query: 944 PXXPLXXXRPPPPXPXXPPXX--PPPXPXXXXXXEGG 1048
P P+ PPPP P PPP P GG
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 39.9 bits (89), Expect = 6e-04
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 952 PPFXXXPPPPPPXX-PPXPPPPPPXXXXXTXRRXGXPXXS 1068
PP PPPPPP PP PPPPP R+ P S
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQS 44
Score = 31.1 bits (67), Expect = 0.28
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 564 PPPXXKXGXXXXKXPPPPPPP 626
PPP G PPPPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 606 PPPPPPPPXXXGGGXRXXXPXPPP 677
PP PPPP G P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 606 PPPPPPPPXXXGGGXRXXXPXPPP 677
P PPPPP G P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 564 PPPXXKXGXXXXKXPPPPPPPP 629
PPP PPPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 609 PPPPPPPXXXGGGXRXXXPXPP 674
PPPPPPP + P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 559 GXPPPXKKXXXXTXXXPPPPXPPP 630
G PPP PPP PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.64
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 937 PXTXXPPFXXXPPP--PPPXXPPXPPPPPP 1020
P + PP P P PP PPPPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 27.5 bits (58), Expect(2) = 0.011
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 955 PFXXXPPPPPPXXPP 999
P PPPPPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 27.1 bits (57), Expect(2) = 0.011
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 976 PPPPXXPPXPPPPP 1017
PPPP P PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
Score = 26.6 bits (56), Expect = 5.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 606 PPPPPPPP 629
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 5.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 606 PPPPPPPP 629
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 937 PXTXXPPFXXXPPPPPPXXPPXPPP 1011
P T P P PPP PP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 606 PPPPPPPP 629
P PPPPPP
Sbjct: 236 PAPPPPPP 243
Score = 22.6 bits (46), Expect(2) = 2.5
Identities = 10/31 (32%), Positives = 10/31 (32%)
Frame = +3
Query: 531 PXPXXXXXXRAPPPXXKXGXXXXKXPPPPPP 623
P P A P PPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.068
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 937 PXTXXPPFXXXP-PPPPPXXPPXPPPPPP 1020
P + PP P PPPPP P PP PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 33.1 bits (72), Expect = 0.068
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +1
Query: 937 PXTXXPPFXXXPPPPPPXXPPXPP--PPPP 1020
P PP PPP P P PP PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 952 PPFXXXPPPPPPXXPPXPPPPP 1017
PP PP P PPPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPP 1711
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +3
Query: 606 PPPPPPPPXXXGGGXRXXXPXP 671
PPPP PP G P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 21.8 bits (44), Expect(2) = 5.2
Identities = 8/22 (36%), Positives = 9/22 (40%)
Frame = +3
Query: 564 PPPXXKXGXXXXKXPPPPPPPP 629
PP + P PPPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPP 1711
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.068
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 937 PXTXXPPFXXXPPPPPPXXPPXPPPPPP 1020
P T PP PPP P PP P PP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPP 166
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 970 PPPPPPXXPPXPPPPPP 1020
PPPPPP P P P
Sbjct: 5 PPPPPPAPAPAAAAPAP 21
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 970 PPPPPPXXPPXPPPPPP 1020
PPPPP P P PP
Sbjct: 6 PPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 937 PXTXXPPFXXXPPPPPPXXPPXPPPPPP 1020
P PP PP PP P PPP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPP 152
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.9 bits (64), Expect = 0.64
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 606 PPPPPPPPXXXGGGXRXXXP 665
PPPPPPPP G + P
Sbjct: 946 PPPPPPPPLVSAAGGKFVSP 965
Score = 28.3 bits (60), Expect(2) = 0.085
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 985 PXXPPXPPPPPP 1020
P PP PPPPPP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 26.6 bits (56), Expect = 5.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 606 PPPPPPPP 629
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 23.0 bits (47), Expect(2) = 0.085
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 943 TXXPPFXXXPPPPPPXXPPXP 1005
T P P PPPP PP P
Sbjct: 896 TSLPTIITHPTPPPP--PPLP 914
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.12
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGG 951
GGG GG GG GG GGG GG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGG 263
Score = 32.3 bits (70), Expect = 0.12
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGG 951
GGG GG GG GG GGG GG
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHGG 270
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGG 951
GGG GG G GG GGG GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGG 249
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGG 951
G GGG GG GG GG GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGG 206
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGGXWVXGXP 930
GG GG GG G GGG GG G P
Sbjct: 242 GGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 26.2 bits (55), Expect = 7.8
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = -1
Query: 679 WGGGXGXXXRXPPPXXXGGGGGGGGXFXXXXPXFXXGGGARXXXXXXGXGXPPPPFFXXX 500
+GG G GG GGG G F F G G G G P F
Sbjct: 207 FGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG-FGGGLGGFGGGPGGFGGGP 265
Query: 499 XGXGG 485
G GG
Sbjct: 266 GGHGG 270
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.12
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Frame = +3
Query: 531 PXPXXXXXXRAPPPXXKXGXXXXKXPPPPPPPPXXXGGG------XRXXXPXPPP 677
P P R PP G PPPPPPP G R P PPP
Sbjct: 313 PPPPPSRRNRGKPPIGN-GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 29.5 bits (63), Expect = 0.84
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 7/33 (21%)
Frame = +3
Query: 600 KXPPPPPPP-------PXXXGGGXRXXXPXPPP 677
K PPPPPPP P G P PPP
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +1
Query: 928 GGXPXTXXPPFXXXPPPPPPXXPPXPPPPPPXXXXXTXRRXGXPXXSP 1071
G T PP P PP P PP PP P +P
Sbjct: 407 GNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 28.3 bits (60), Expect = 1.9
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 12/69 (17%)
Frame = +1
Query: 877 RXPXXPXPXXXXGGXXX--GGXPXTXXPPFXXXPPPP----------PPXXPPXPPPPPP 1020
R P P P G G + PP PPPP PP PPPPPP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPP---PPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Query: 1021 XXXXXTXRR 1047
T R+
Sbjct: 367 RSAPSTGRQ 375
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 952 PPFXXXPPPPPPXXPPXPPPPP 1017
PP P PP P P PPP
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPP 478
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/64 (25%), Positives = 19/64 (29%), Gaps = 9/64 (14%)
Frame = +1
Query: 466 GGGXFXXPPXXPXXKKRGGGAXXXXPXXXXXGXPPPXKKXXXXTXXXPP---------PP 618
G PP P + G+ P PPP + PP PP
Sbjct: 330 GSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP 389
Query: 619 XPPP 630
PPP
Sbjct: 390 APPP 393
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +1
Query: 937 PXTXXPPFXXXPPPPPPXXPPXPPPPPPXXXXXTXRRXGXPXXSP 1071
P + P PP P P PP PP G P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.36
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGG-GGGXXXKGG 951
GG GGG GG GGG GG +GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGG 49
Score = 29.9 bits (64), Expect = 0.64
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGG 951
GG GG GG GG GG +GG
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGG 52
Score = 29.9 bits (64), Expect = 0.64
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 1016 GGGGGXGGXXGGGGGGXXXKGG 951
GG GG GG GG GG +GG
Sbjct: 45 GGRGGRGGARGGRGGSSGGRGG 66
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGG 951
G GGG GG GG GG +GG
Sbjct: 34 GARGGGRGGARGGRGGRGGARGG 56
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGG 951
GGG GG G GG GG +GG
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGG 59
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGGXWVXGXP 930
GG GG GG G GG KGG V P
Sbjct: 48 GGRGGARGGRGGSSGGRGGAKGGAKVIIEP 77
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGG 951
GG GG GG GG GG +GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGG 34
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 1019 GGGGGGXGGXXGGGGGGXXXKGG 951
GG GG GG G GGG +GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGG 38
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -3
Query: 1016 GGGGGXGGXXGG--GGGGXXXKGG 951
GG GG GG GG GGG +GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGG 46
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 1016 GGGGGXGGXXGGGGGGXXXKGG 951
GG GG GG G GGG +GG
Sbjct: 457 GGRGGFGGRGGFGGGRGRGRGG 478
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 1013 GGGGXGGXXG-GGGGGXXXKGG 951
GGG GG G GG GG +GG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGG 467
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 931 GXPXTXXPPFXXXPPPPPPXXPPXPPP 1011
G P P P PPP PP P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 26.2 bits (55), Expect = 7.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 937 PXTXXPPFXXXPPPPPPXXPPXPPP 1011
P P P PPP PP P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTP 1222
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.6 bits (56), Expect = 5.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 973 PPPPPXXPPXPPPP 1014
PPP P PP PP P
Sbjct: 806 PPPAPLPPPAPPLP 819
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 5.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 606 PPPPPPPP 629
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 5.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 606 PPPPPPPP 629
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 26.2 bits (55), Expect = 7.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 994 PPXPPPPPP 1020
PP PPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 5.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 606 PPPPPPPP 629
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 606 PPPPPPPP 629
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,451,114
Number of Sequences: 5004
Number of extensions: 43506
Number of successful extensions: 798
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 561795324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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