Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_G07
(1072 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.38
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 2.0
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 4.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 6.2
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 26.6 bits (56), Expect = 0.38
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 606 PPPPPPPP 629
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 25.0 bits (52), Expect = 1.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 609 PPPPPPPXXXG 641
PPPPPPP G
Sbjct: 1355 PPPPPPPPSSG 1365
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 994 PPXPPPPP 1017
PP PPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 997 PXPPPPPP 1020
P PPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 22.2 bits (45), Expect = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 610 PPPXPPPXGXG 642
PPP PPP G
Sbjct: 1355 PPPPPPPPSSG 1365
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 606 PPPPPPPPXXXG 641
P PPPPPP G
Sbjct: 341 PAPPPPPPSSSG 352
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 997 PXPPPPPP 1020
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.0 bits (47), Expect = 4.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 994 PPXPPPPPP 1020
PP P PPPP
Sbjct: 338 PPKPAPPPP 346
Score = 22.6 bits (46), Expect = 6.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 595 TXXXPPPPXPPPXGXG 642
T P PP PPP G
Sbjct: 337 TPPKPAPPPPPPSSSG 352
Score = 22.2 bits (45), Expect = 8.1
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 952 PPFXXXPPPPPPXXPP 999
PP PPPPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.2 bits (45), Expect = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 976 PPPPXXPPXPP 1008
PP P PP PP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 979 PPPXXPPXPPP 1011
PP PP PPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 982 PPXXPPXPPPP 1014
PP P PPPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 985 PXXPPXPPPPP 1017
P P PPPPP
Sbjct: 338 PPKPAPPPPPP 348
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 2.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 982 PPXXPPXPPPPPP 1020
P P PPPPPP
Sbjct: 1852 PVSGSPEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 606 PPPPPPPP 629
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related protein
STG-1 protein.
Length = 397
Score = 23.0 bits (47), Expect = 4.7
Identities = 13/38 (34%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Frame = -3
Query: 1058 GXPXLLXVXXXXXGGGGGGX--GGXXGGGGGGXXXKGG 951
G P G GG G GGGGGG G
Sbjct: 20 GGPGSSSAGGVVTGASGGSIVVGANNGGGGGGLGIASG 57
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 6.2
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Frame = +1
Query: 937 PXTXXPPFXXXPPPP--PPXXPPXPPP 1011
P PP PPP PP PP P
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 22.2 bits (45), Expect = 8.1
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +2
Query: 974 PPPXPXXPPXXPPPXPXXXXXXEGGEGXPP 1063
P P P PP P G G PP
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 22.2 bits (45), Expect = 8.1
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 955 PFXXXPPPPPPXXPPXPPPPPP 1020
P PP P PP PP P
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAP 55
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,913
Number of Sequences: 438
Number of extensions: 10413
Number of successful extensions: 50
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 35788797
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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