Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_G05
(890 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 46 5e-06
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 40 5e-04
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 36 0.006
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 36 0.008
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 35 0.014
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 34 0.024
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 33 0.041
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 33 0.055
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 33 0.055
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 33 0.072
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 33 0.072
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 32 0.13
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 31 0.22
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 31 0.29
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 31 0.29
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 30 0.38
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 29 0.67
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 29 0.89
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 28 1.6
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 28 1.6
SPBC4B4.04 |||translation initiation factor eIF2A |Schizosacchar... 28 1.6
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 28 2.1
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 28 2.1
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 2.7
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 27 2.7
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 27 2.7
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 27 3.6
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 27 4.7
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 27 4.7
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 27 4.7
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 27 4.7
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 26 6.3
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 26 6.3
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 26 6.3
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 26 8.3
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 26 8.3
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 26 8.3
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 26 8.3
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 46.4 bits (105), Expect = 5e-06
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 677 LDTRGKFTLXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
LDT+GKF L + YSP+G++I G G + + G+L H GH
Sbjct: 141 LDTKGKFGLCIDYSPNGRFIVSGHQTGQLFLISTETGRLFHVLSGH 186
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGKILI 641
SPD +A S D + +W S K+ T + +SP+ + ++SG G++ +
Sbjct: 112 SPDGQTIAFTSVDGRIAVWDNPSDCKISELDTKGKFGLCIDYSPNGRFIVSGHQTGQLFL 171
Query: 642 FA 647
+
Sbjct: 172 IS 173
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGHAC-LLXXMFXPXSXPLLT 865
V +SP +A +I I+DV G GHA + F P LL+
Sbjct: 193 VAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLS 246
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 39.9 bits (89), Expect = 5e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGHACLLXXM-FXPXSXPLLTGS 871
V +SPDGKY+A G D I I+D+AQ ++ GH + + F L++GS
Sbjct: 340 VAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS 395
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH-ACLLXXMFXPXSXPLLTGS 871
V +SPDG++IA G+LD +I I+ + G L GH + F P L++GS
Sbjct: 423 VMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGS 477
Score = 33.5 bits (73), Expect = 0.041
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGS 620
SPD LA+ +D + +W ++ ++++L FS D K ++SGS
Sbjct: 343 SPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS 395
Score = 32.7 bits (71), Expect = 0.072
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGS 620
SPD +A+ S D + +W S ++ V+++ FSPD K+++SGS
Sbjct: 426 SPDGQFIAAGSLDKVIRIWTS-SGTLVEQLHGHEESVYSVAFSPDGKYLVSGS 477
Score = 31.5 bits (68), Expect = 0.17
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDV 778
V +SPDGKY+ G+LD I ++++
Sbjct: 464 VAFSPDGKYLVSGSLDNTIKLWEL 487
Score = 29.1 bits (62), Expect = 0.89
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 695 FTLXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
F L V SPDGK+I G+ D I + T +GH
Sbjct: 514 FILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGH 553
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 36.3 bits (80), Expect = 0.006
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 683 TRGKFTLXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
+R + + +SPDGKY+ G D I ++D++ K+ + GH
Sbjct: 358 SRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGH 401
Score = 34.7 bits (76), Expect = 0.018
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 453 LTXSPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLT-DVWTLXFSPDXKHVISGS 620
+ SPD L + ++D + LW +S +K++ +G D+++L FS + + ++SGS
Sbjct: 366 IAFSPDGKYLVTGTEDRQIKLWD-LSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS 421
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 695 FTLXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGHA-CLLXXMFXPXSXPLLTGS 871
F L V SPD ++ G+ D + +D+ G+ T +GH ++ F P +GS
Sbjct: 540 FVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGS 599
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 453 LTXSPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGS 620
+ SP+ +A S D + +W +S ++ V+++ FSPD ++SGS
Sbjct: 449 IAISPNDQFIAVGSLDQIIRVWS-VSGTLVERLEGHKESVYSIAFSPDSSILLSGS 503
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
V +SPDGK+IA G D +++I+ KL +GH
Sbjct: 370 VTWSPDGKFIAIGGKDDLVSIYSFPLRKLVARCQGH 405
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 35.1 bits (77), Expect = 0.014
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGS 620
SPD L S S D S+ILW + EKL+ + G + V + PD I+GS
Sbjct: 264 SPDDRYLLSCSCDKSVILWDAFTGEKLRDYKHGFS-VSCCCWLPDGLSFITGS 315
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/64 (20%), Positives = 36/64 (56%)
Frame = +3
Query: 453 LTXSPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGK 632
++ S + LAS S+D + I++ ++ +++ + V + +SPD ++++S S
Sbjct: 219 ISYSHNGRYLASASKDKTAIIFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKS 278
Query: 633 ILIF 644
++++
Sbjct: 279 VILW 282
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
+ YS +G+Y+A + D IFDV K GH
Sbjct: 219 ISYSHNGRYLASASKDKTAIIFDVVNLKRVFRLIGH 254
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 34.3 bits (75), Expect = 0.024
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGKILI 641
S D +AS SQD ++ LW + E + + VW F+P + + SGS I I
Sbjct: 474 SKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRI 533
Query: 642 F 644
+
Sbjct: 534 W 534
Score = 29.5 bits (63), Expect = 0.67
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH-ACLLXXMFXPXSXPLLTGS 871
+ S DG+ IA + D I ++D + G++ GH + F P S L +GS
Sbjct: 471 IQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGS 526
Score = 29.1 bits (62), Expect = 0.89
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +2
Query: 719 PDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
P +A G +G++ ++D+A + H+ GH
Sbjct: 113 PTNTLLATGGAEGLVKVWDIAGAYVTHSFRGH 144
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 480 LASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGS 620
LAS + DS + LW S + +F + + L F P ++SGS
Sbjct: 162 LASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGS 208
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 33.5 bits (73), Expect = 0.041
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 650 LKVXNXXQVLDTRGKFTLXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGHACLL 826
L+ VLD + + + +SP+G +A + D + I+D+ + L HT H+ L+
Sbjct: 336 LRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLV 394
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 33.1 bits (72), Expect = 0.055
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 453 LTXSPDXGXLASXSQDSSLILWXXISXE-KLKMFXTGLTD-VWTLXFSPDXKHVISGSNA 626
+T P L S S D+S+ W + L G T+ VW L FSP+ + S N
Sbjct: 429 VTWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADND 488
Query: 627 GKILIF 644
G + ++
Sbjct: 489 GNVFLW 494
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 33.1 bits (72), Expect = 0.055
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 713 YSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGHACLLXXMFXPXSXPLLTGS 871
+SPDG+ IA + D + ++D GK T GH + LL S
Sbjct: 397 FSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSS 449
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGS 620
SPD +A+ S DSS+ LW + + L + V+ +S D + ++S S
Sbjct: 398 SPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSS 450
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 32.7 bits (71), Expect = 0.072
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 486 SXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGKILIF 644
S S D ++ LW E F +DV ++ SPD + V+SGS I I+
Sbjct: 80 SASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIW 132
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 453 LTXSPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGK 632
+T SPD AS +D +L+LW L ++ L FSP+ ++ + +
Sbjct: 198 VTISPDGSLCASGGRDGTLMLWDLNESTHLYSL-EAKANINALVFSPN-RYWLCAATGSS 255
Query: 633 ILIF 644
I IF
Sbjct: 256 IRIF 259
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 453 LTXSPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTD-VWTLXFSPD 596
++ SPD + S S+D ++ +W I K + G +D V + FSP+
Sbjct: 111 VSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPN 159
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 32.7 bits (71), Expect = 0.072
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 722 DGKYIAXGALDGIINIFDVAQGKLXHTXEGHACLL 826
+GK+I G+ D I IF+ + GKL +GH L+
Sbjct: 398 NGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLI 432
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 677 LDTRGKFTLXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH-ACLLXXMFXPXSX 853
L KF V YSP+ + A DG + +FD G + + H + + P S
Sbjct: 185 LRVHSKFVYDVRYSPNDERFASAGADGKVYVFDGKTGDQVYEIDAHKGSIFSISWSPDSS 244
Query: 854 PLLTGS 871
+T S
Sbjct: 245 QFVTSS 250
Score = 29.9 bits (64), Expect = 0.51
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 713 YSPDGKYIAXGALDGIINIFD 775
YSPDGKY+A G G + ++D
Sbjct: 487 YSPDGKYLACGDASGKVVLYD 507
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 456 TXSPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSN 623
T SPD L S S+D+S LW + L + VW + F P + + S+
Sbjct: 386 TFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASH 441
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
V +PDG +A +G+I+++D+ G+ T GH
Sbjct: 511 VAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGH 546
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 483 ASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSN 623
A+ S D + LW L++F L+DV + F P+ +V++GS+
Sbjct: 437 ATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSS 483
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSN 623
+PD +AS + + LW + ++K ++++L FS + ++SG +
Sbjct: 514 APDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGS 567
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +3
Query: 453 LTXSPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGK 632
L S D + S DSS+I+W + E+LK + V + F P K+ + S+
Sbjct: 140 LCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRIEAHQSHVKGITFDPAGKYFATESDDRT 199
Query: 633 ILIF 644
I ++
Sbjct: 200 IKVW 203
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 719 PDGKYIAXGALDGIINIF 772
PDG IA G LDG I I+
Sbjct: 28 PDGSRIATGGLDGTIRIW 45
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 695 FTLXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
+ V +S DG +++ G +G+++I+DV T GH
Sbjct: 223 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGH 262
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 701 LXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEG 811
L + + PDGK + +LDG + ++V +GK +G
Sbjct: 513 LSLAFHPDGKEVCVASLDGQLTFWNVQEGKQTSLIDG 549
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 29.5 bits (63), Expect = 0.67
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 656 VXNXXQVLDTRGKFTLXVPYSPDGKYIAXGALDGIINIFDV 778
V QV D G T P KY+A G+ GI+NI+D+
Sbjct: 383 VVRRWQVQD--GVSTTHFCLDPSNKYLAIGSKSGIVNIYDL 421
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 29.1 bits (62), Expect = 0.89
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISG 617
S D L S S + L++W + K+ F + T FSP K + +G
Sbjct: 30 STDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWIMTCAFSPSTKSIAAG 81
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 701 LXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
L V SPDG+++A LD + ++ + K GH
Sbjct: 538 LAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGH 575
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/55 (20%), Positives = 23/55 (41%)
Frame = +3
Query: 480 LASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGKILIF 644
L S +DS + LW ++ ++W + SPD K ++ + ++
Sbjct: 188 LLSVGKDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTGSDVKVW 242
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
V Y P+ G++D I ++D++ G + EGH
Sbjct: 553 VLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGH 588
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 480 LASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGS 620
L S S DSS+ +W + E L ++++ + P+ ISGS
Sbjct: 520 LVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGS 566
>SPBC4B4.04 |||translation initiation factor eIF2A
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 576
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 713 YSPDGKYI---AXGALDGIINIFDVAQG-KLXHTXEGHACLLXXMFXPXSXPLLT 865
+SP+ +YI G L G I+IFD A K T E C F P S LLT
Sbjct: 317 FSPNSRYILLAGFGNLQGSIDIFDAANNMKKITTVEAANCTYCE-FSPDSQFLLT 370
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
V Y+ GKY+ + ++ +++V G H GH
Sbjct: 20 VKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGH 55
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
V + G + G +DG I I+D+ H +GH
Sbjct: 183 VAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGH 218
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFS-PDXKHVISGSNAGKI 635
S D + + S D+++ LW + + L F VW L PD K +G +G I
Sbjct: 225 SDDGRTILTASSDATIKLWSLRAQKCLFSFIAHSDSVWALYSEHPDLKVFYAGDRSGLI 283
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 474 GXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGKI 635
G LAS D++L +W S L F V + +SP + +++ S G I
Sbjct: 262 GQLASGGNDNNLFVWDYRSSRPLHKFEEHTAAVKAIGWSPHQRGILA-SGGGTI 314
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +3
Query: 465 PDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGKILIF 644
P+ L + D + W S + L + + + +PD K V++GS+ ++L+F
Sbjct: 336 PNTPYLLTACADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELLVF 395
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 713 YSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
+ P G ++A G DG I ++ + GK+ GH
Sbjct: 154 WHPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYGH 187
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKL 793
V YSP+G ++A + +GI+ +D +L
Sbjct: 143 VTYSPNGNFLAVSSCNGILYFYDTQTREL 171
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 462 SPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSN 623
SP A+ S D + LW L++F DV + F P+ ++ +GS+
Sbjct: 454 SPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSS 507
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 713 YSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGHAC 820
+S DG+Y+A G D I+ I+ V + + C
Sbjct: 246 FSRDGRYLAVGGQDRILRIWAVLDSEHARSVASETC 281
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/54 (22%), Positives = 26/54 (48%)
Frame = +3
Query: 453 LTXSPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVIS 614
L + + LAS D++L++W + L F + V + +SP + +++
Sbjct: 380 LEWNSNENLLASGGNDNALMVWDKFEEKPLYSFHNHIAAVKAITWSPHQRGILA 433
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 480 LASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXFSPDXKHVISGSNAGKI 635
+ S S+D ++ +W +S +K + L W + + D V G + G I
Sbjct: 243 IISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDNGLI 294
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 707 VPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
+ Y+ DG + A D +IN++ G+ T EGH
Sbjct: 16 IKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGH 51
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 453 LTXSPDXGXLASXSQDSSLILWXXISXEKLKMFXTGLTDVWTLXF 587
+T + L S S D SL +W S L F T L +W + F
Sbjct: 107 ITFNSSGTLLLSGSIDRSLQIWDITSLSCLCKFYTKLRFIWGVKF 151
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 692 KFTLXVPYSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
K V SP+ ++IA + DG I I+ +L T GH
Sbjct: 55 KSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGH 95
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +2
Query: 722 DGKYIAXGALDGIINIFDVAQGKLXHTXEGH 814
DGK + G G++ IFD++ + + H
Sbjct: 92 DGKLLLAGDATGLVQIFDLSTRSILRALDAH 122
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/51 (25%), Positives = 22/51 (43%)
Frame = +2
Query: 713 YSPDGKYIAXGALDGIINIFDVAQGKLXHTXEGHACLLXXMFXPXSXPLLT 865
+S G+++ +LDG I +D+ G L + + F P L T
Sbjct: 580 FSDTGRWLVTASLDGTIRTWDLPTGHLIDSISTPSVCTSLTFAPTGDYLAT 630
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 713 YSPDGKYIAXGALDGIINIFDVAQGK 790
+SPDG I G +GI+ +++ GK
Sbjct: 405 WSPDGNNIYIGRRNGIVEEYNIHSGK 430
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +2
Query: 662 NXXQVLDTRGKFTLXVPYSPDGKYIAXGALDGIINIFDVAQGKLXH 799
N QVL + +SPD +YI D ++ + + A+ L +
Sbjct: 569 NQQQVLKGHSLTVTTIKFSPDDRYILSAGRDRLVCLHEQAENLLDY 614
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,280,004
Number of Sequences: 5004
Number of extensions: 30343
Number of successful extensions: 154
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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