Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_G03
(908 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0299 - 17051570-17052474,17053542-17053755 34 0.18
12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-25... 31 0.96
11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-23... 31 0.96
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 0.96
08_01_0774 + 7482311-7482919,7484012-7484077,7484211-7484384,748... 31 1.7
04_03_0904 + 20717005-20718087 30 2.9
10_03_0023 - 7151465-7152111,7152222-7152405 29 3.9
12_02_1174 - 26696869-26698191 29 5.1
06_01_0486 - 3455030-3455770 29 5.1
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 29 5.1
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233... 29 6.7
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 29 6.7
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 29 6.7
07_01_0862 - 7172083-7172931 28 8.9
05_01_0545 - 4756266-4757510 28 8.9
02_03_0120 + 15463163-15465250 28 8.9
01_01_0070 - 542603-542686,542803-543441 28 8.9
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/96 (28%), Positives = 30/96 (31%), Gaps = 2/96 (2%)
Frame = +2
Query: 626 PXXPLXXPXLPPLL--FPXLXXYRIPXPPFSLREXXXAFLIXHXCXXSHLPLXVVPXXPX 799
P P P +P L P + P PP+ AF H P P P
Sbjct: 238 PFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPP-AFPFPHLPPIFSPPSPPPPPPPA 296
Query: 800 LXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
P P L P P YP P P P PP
Sbjct: 297 FPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPP 332
Score = 33.5 bits (73), Expect = 0.24
Identities = 36/131 (27%), Positives = 40/131 (30%), Gaps = 2/131 (1%)
Frame = +2
Query: 521 PXCXPFFPYASAPLTXITKIXPQVXVXKPHRTIXXPXXPLXXPXLPPLLFPXLXXYRIPX 700
P PF P+ P+ +T P P P P P PP FP I
Sbjct: 234 PPPPPFLPFPLPPIPFLTPPSP------PPPAFPFPLPP--WPWAPPPAFPFPHLPPIFS 285
Query: 701 PPFSLREXXXAFLIXHXCXXSHLPLXVVPXXPXLXA--PNPPLXXPTXCPLXPXXYPP*X 874
PP AF PL P P P PP P P P +PP
Sbjct: 286 PPSPPPPPPPAFPFPFPQLP---PLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLA 342
Query: 875 PXPXXKPXXPP 907
P P PP
Sbjct: 343 PLFPPYPSPPP 353
>12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-250315,
250429-250556,250764-250862,250953-251061,251301-251380,
251464-251691,251768-251833,251970-252086,252538-252735,
252847-252963,253056-253115,253228-253314,253419-253502,
253623-253757,253837-253899,253979-254083,254174-254286,
254374-254626,254715-254851,254970-255248,255352-256354,
256450-256935,257023-257193,257285-257470,257820-257942,
258024-258134,258225-258395
Length = 1708
Score = 31.5 bits (68), Expect = 0.96
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 767 LPLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
LPL +P P + P PP+ P P+ PP P P PP
Sbjct: 1659 LPL-ALPAPPGMGGPPPPMGMPGMPPMGGMGMPPMGPGPMPAYGMPP 1704
>11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-234912,
235048-235175,235383-235481,235572-235680,235920-235999,
236083-236310,236387-236452,236589-236705,237142-237339,
237451-237567,237660-237719,237832-237918,238023-238106,
238233-238367,238446-238508,238588-238692,238781-238893,
238981-239233,239322-239458,239577-239855,239958-240960,
241054-241539,241627-241797,241890-242075,242426-242548,
242630-242740,242834-243004
Length = 1708
Score = 31.5 bits (68), Expect = 0.96
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 767 LPLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
LPL +P P + P PP+ P P+ PP P P PP
Sbjct: 1659 LPL-ALPAPPGMGGPPPPMGMPGMPPMGGMGMPPMGPGPMPAYGMPP 1704
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.5 bits (68), Expect = 0.96
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 767 LPLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
LP P P L PP P PL P PP P P P PP
Sbjct: 1149 LPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPP--PPPPPLPSGPP 1193
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 770 PLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
P P P L PP P P P P P P P PP
Sbjct: 1165 PPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPP 1210
>08_01_0774 +
7482311-7482919,7484012-7484077,7484211-7484384,
7484473-7484603,7484726-7484802,7484981-7485064,
7487885-7488066,7488189-7488266,7489813-7489945,
7491610-7491670,7491861-7491942,7492143-7492271,
7492510-7492653,7493102-7493204,7493382-7493513,
7494127-7494485,7495149-7495229,7495384-7495450,
7495636-7495706,7496087-7496178,7496365-7496458,
7497692-7497789,7498206-7498341,7498599-7498618,
7498781-7498876,7498973-7499060,7499171-7499288,
7499738-7499759,7500203-7500326,7500625-7500702,
7500837-7500955,7501816-7501869,7502260-7502362,
7503133-7503261,7503345-7503453,7503788-7503819
Length = 1424
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 794 PXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
P L P+PP PT P P +P P P P PP
Sbjct: 54 PELMPPSPPKASPTPPP-QPQPHPQLQPPPPPAPLPPP 90
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 785 PXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
P P P PP P P P Y P P P P PP
Sbjct: 236 PNPPPTYKPAPPTYKPQPKPNPPPTYKP-QPKPTPTPYTPP 275
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +2
Query: 770 PLXVVPXXPXLXAPNPPLXXPTXCPLXPXX--YPP*XPXPXXKPXXPP 907
P +VP P P+PP P P P PP P P P PP
Sbjct: 196 PPSLVP--PVFPTPSPPSILPPLTPQPPPSSLIPPVLPLPLLNPPPPP 241
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Frame = +2
Query: 764 HLPLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP-----*XPXPXXKPXXPP 907
H P V P P P PP P P P PP P P +P PP
Sbjct: 139 HRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPP 191
>06_01_0486 - 3455030-3455770
Length = 246
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 794 PXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
P + P PP P P P PP P P P PP
Sbjct: 114 PYIPPPTPPYVPPPTPPSPPPYVPPPTP-PSPPPYVPP 150
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 794 PXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
P + P PP P P P PP P P P PP
Sbjct: 102 PYIPPPTPPYVPPYIPPPTPPYVPPPTP-PSPPPYVPP 138
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +2
Query: 770 PLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
P+ V P P AP PP P P+ P PP P PP
Sbjct: 5 PISVKPPSPVAAAPPPP---PVQVPVPPPPPPPLPPAAAAVEPLPP 47
>10_08_1008 -
22222051-22222377,22222479-22222640,22223179-22223310,
22224556-22224608,22224713-22225256
Length = 405
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 770 PLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
PL VP P AP P P P PP P P + PP
Sbjct: 8 PLVTVPPAPAAAAP-----PPAAAPAPPPSQPPPPPLPFAQQAPPP 48
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 764 HLPLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKP 895
H PL + P L P PP P P P PP P P P
Sbjct: 42 HEPLFPLENAPALPPPPPPPPAPFF-PFLPDSAPPQLPPPVTTP 84
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 794 PXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
P + PP P P P PP P P +P PP
Sbjct: 206 PAVIIVEPPAPAPEPEPEPPKKEPPPPPPPKQEPCPPP 243
>07_01_0862 - 7172083-7172931
Length = 282
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 767 LPLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
LP P P P PPL PL P P P KP PP
Sbjct: 176 LPPKKKPLPPPSPPPQPPLPEKENTPLPPLLLP-----PKKKPLPPP 217
>05_01_0545 - 4756266-4757510
Length = 414
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +3
Query: 750 PVXYXTFRCXSFPSXLXCXXPTPXFXPXPPAPXXPLXIPXXXPXRXXNXPXPP 908
PV F+C F P+P P PP P P +P P + P PP
Sbjct: 367 PVDCAAFQCKPF-------VPSP-LLPPPPPPAYPGPLPPVYPVPYASPPPPP 411
>02_03_0120 + 15463163-15465250
Length = 695
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +3
Query: 765 TFRCXSFPSXLXCXXPTPXFXPXPP--APXXPLXIPXXXPXRXXNXPXPP 908
TFR FP+ PT P PP P P P P + P PP
Sbjct: 271 TFRTFGFPNSSYAPPPTKYIGPMPPNNQPLPPPPSPSPSPP-PPSPPPPP 319
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +2
Query: 770 PLXVVPXXPXLXAPNPPLXXPTXCPLXPXXYPP*XPXPXXKPXXPP 907
P P P + PP P P P PP P P P P
Sbjct: 67 PAKAPPVAPAVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVSP 112
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,818,115
Number of Sequences: 37544
Number of extensions: 312969
Number of successful extensions: 1364
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -