Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_F24
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    49   4e-08
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    40   2e-05
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   3.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
 Frame = +1

Query: 355 LPRGETFVHTNELQMEEAVKVFRVLYYAKDFDVFMRTACWMRXRIXGGXFVYAFTAACFH 534
           L R E F        + A K+ R+   A+  D  +  A + R R+    F YAF+ A  H
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 535 RTDWKGL*LPAPYEIYPXFFVDXXVIXKAXYDXDDXXP-PRTPVPL-GNXTASPL 693
           R D + L LP+   ++P  +VD  V  +A  +        RTP+ +  + TAS L
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQVFARAREEAHIVPEGSRTPIEIPQDFTASDL 188


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 40.3 bits (90), Expect = 2e-05
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
 Frame = +1

Query: 439 KDFDVFMRTACWMRXRIXGGXFVYAFTAACFHRTDWKGL*LPAPYEIYPXFFVDXXVIXK 618
           ++ D  +  A + R R+    F YA + A  HR D + + LP+  E +P  +VD  V  K
Sbjct: 102 RNVDDLLSVAVYARDRVNPYLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAK 161

Query: 619 AXYDXDDXXP-PRTPVPL-GNXTASPL 693
           A  +        RTP+ +  + TAS L
Sbjct: 162 AREEATVVPEGSRTPIEIPRDYTASDL 188


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 26  IGNSLRFELCTQEFFKHEGSSTTGL 100
           +G + +FE+   +FF ++ S T  L
Sbjct: 299 VGGNKQFEMMADQFFVYDASITASL 323


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 26  IGNSLRFELCTQEFFKHEGSSTTGL 100
           +G + +FE+   +FF ++ S T  L
Sbjct: 306 VGGNKQFEMMADQFFVYDASITASL 330


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 863 GGRGGGXSXRXGSXGG 816
           GGRGGG     G  GG
Sbjct: 93  GGRGGGRDGDRGDGGG 108


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 507 DEXASXDPXSHPARSPHENIEVLSVVEDSEDFDGFF 400
           D   +  P + P R P +N + L  +E S +  G F
Sbjct: 125 DMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLF 160


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 817 PPNEPXLXDXPPPLPP 864
           P N+P +   PP  PP
Sbjct: 185 PTNKPVVVTKPPQAPP 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,777
Number of Sequences: 336
Number of extensions: 2635
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)