Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_F23
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   2.1  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    22   6.5  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    22   6.5  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    22   6.5  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    22   6.5  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   6.5  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   6.5  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   6.5  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   6.5  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   6.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 240 PSKSLKCTSTFNSITXKYAIKLKEETPIGTE 332
           P  +L C  TF+ +  ++ +  KE  P  T+
Sbjct: 101 PGNALSCKETFSLLYYEFDVATKEPPPWETD 131


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 NVANKLQVPLDFPILYG 82
           N   ++ VP+ FP+ YG
Sbjct: 106 NYIEQIPVPVPFPVYYG 122


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 NVANKLQVPLDFPILYG 82
           N   ++ VP+ FP+ YG
Sbjct: 106 NYIEQIPVPVPFPVYYG 122


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 NVANKLQVPLDFPILYG 82
           N   ++ VP+ FP+ YG
Sbjct: 106 NYIEQIPVPVPFPVYYG 122


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 NVANKLQVPLDFPILYG 82
           N   ++ VP+ FP+ YG
Sbjct: 106 NYIEQIPVPVPFPVYYG 122


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 NVANKLQVPLDFPILYG 82
           N   ++ VP+ FP+ YG
Sbjct: 339 NYIEQIPVPVPFPVYYG 355


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 NVANKLQVPLDFPILYG 82
           N   ++ VP+ FP+ YG
Sbjct: 339 NYIEQIPVPVPFPVYYG 355


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 NVANKLQVPLDFPILYG 82
           N   ++ VP+ FP+ YG
Sbjct: 339 NYIEQIPVPVPFPVYYG 355


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 NVANKLQVPLDFPILYG 82
           N   ++ VP+ FP+ YG
Sbjct: 339 NYIEQIPVPVPFPVYYG 355


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 132 NVANKLQVPLDFPILYG 82
           N   ++ VP+ FP+ YG
Sbjct: 328 NYIEQIPVPVPFPVYYG 344


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -1

Query: 672 EHXWYIGNKYXF 637
           +H W +GN+Y +
Sbjct: 19  QHNWQVGNEYTY 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,856
Number of Sequences: 438
Number of extensions: 4022
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)