Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_F19
         (822 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    33   0.47 
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    33   0.47 
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    31   1.4  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    31   1.4  

>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p
           protein.
          Length = 538

 Score = 33.1 bits (72), Expect = 0.47
 Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
 Frame = -3

Query: 820 GGGGGXXXXXPXXGXXXGXXXXGGXXXXGXXXXXXXFXGXPXXXXGGXKXXXXXEXXGXG 641
           G GGG     P      G    GG    G         G P    GG          G G
Sbjct: 284 GRGGGGAPGAPGSPGGGGFGGQGGGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYG 343

Query: 640 XXGGEXXGG-PXAXAFPG 590
             GG   GG P A   PG
Sbjct: 344 GGGGRGGGGAPGAPGAPG 361



 Score = 31.1 bits (67), Expect = 1.9
 Identities = 21/76 (27%), Positives = 21/76 (27%)
 Frame = -3

Query: 817 GGGGXXXXXPXXGXXXGXXXXGGXXXXGXXXXXXXFXGXPXXXXGGXKXXXXXEXXGXGX 638
           GG       P  G   G    GG    G         G P    GG          G G 
Sbjct: 220 GGAPGGPGAPGGGGFGGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGG 279

Query: 637 XGGEXXGGPXAXAFPG 590
            GG   GG  A   PG
Sbjct: 280 GGGGGRGGGGAPGAPG 295


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
           isoform A protein.
          Length = 610

 Score = 33.1 bits (72), Expect = 0.47
 Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
 Frame = -3

Query: 820 GGGGGXXXXXPXXGXXXGXXXXGGXXXXGXXXXXXXFXGXPXXXXGGXKXXXXXEXXGXG 641
           G GGG     P      G    GG    G         G P    GG          G G
Sbjct: 356 GRGGGGAPGAPGSPGGGGFGGQGGGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYG 415

Query: 640 XXGGEXXGG-PXAXAFPG 590
             GG   GG P A   PG
Sbjct: 416 GGGGRGGGGAPGAPGAPG 433



 Score = 31.1 bits (67), Expect = 1.9
 Identities = 21/76 (27%), Positives = 21/76 (27%)
 Frame = -3

Query: 817 GGGGXXXXXPXXGXXXGXXXXGGXXXXGXXXXXXXFXGXPXXXXGGXKXXXXXEXXGXGX 638
           GG       P  G   G    GG    G         G P    GG          G G 
Sbjct: 292 GGAPGGPGAPGGGGFGGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGG 351

Query: 637 XGGEXXGGPXAXAFPG 590
            GG   GG  A   PG
Sbjct: 352 GGGGGRGGGGAPGAPG 367


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 17/63 (26%), Positives = 17/63 (26%)
 Frame = +1

Query: 634 PXXPXPXXPXGXXXXPPQXGXXXSPXXXXXXXXNXXXXXPXXXXXPXXXXXXGXXPXXPP 813
           P  P P  P       PQ G    P              P     P      G  P  PP
Sbjct: 169 PPQPQPPAPQPPSPPSPQPGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPPPP 228

Query: 814 PPP 822
           PPP
Sbjct: 229 PPP 231


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 17/63 (26%), Positives = 17/63 (26%)
 Frame = +1

Query: 634 PXXPXPXXPXGXXXXPPQXGXXXSPXXXXXXXXNXXXXXPXXXXXPXXXXXXGXXPXXPP 813
           P  P P  P       PQ G    P              P     P      G  P  PP
Sbjct: 169 PPQPQPPAPQPPSPPSPQPGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPPPP 228

Query: 814 PPP 822
           PPP
Sbjct: 229 PPP 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,166,197
Number of Sequences: 53049
Number of extensions: 401280
Number of successful extensions: 813
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)