Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_F13
(808 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 96 8e-19
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 94 3e-18
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 89 1e-16
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 69 1e-10
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 63 7e-09
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 63 7e-09
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 61 3e-08
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 60 6e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 58 3e-07
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 57 6e-07
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 54 3e-06
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 54 6e-06
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 52 1e-05
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 50 5e-05
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 50 7e-05
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 50 7e-05
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 50 7e-05
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 50 7e-05
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 50 7e-05
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 49 1e-04
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 49 1e-04
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 49 2e-04
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 49 2e-04
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 49 2e-04
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 49 2e-04
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 48 2e-04
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 48 2e-04
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 48 3e-04
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 48 3e-04
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 48 3e-04
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 48 3e-04
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 48 4e-04
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 47 5e-04
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 47 5e-04
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 47 5e-04
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 47 5e-04
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 47 6e-04
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 47 6e-04
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 47 6e-04
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 47 6e-04
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 46 8e-04
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 46 8e-04
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 46 0.001
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 46 0.001
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 46 0.001
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 46 0.001
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 46 0.001
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 46 0.001
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 45 0.002
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 45 0.002
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 45 0.002
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 45 0.002
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 45 0.002
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 45 0.003
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 45 0.003
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 45 0.003
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 45 0.003
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 44 0.003
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.003
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 44 0.003
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 44 0.005
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 44 0.005
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 44 0.005
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 44 0.005
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 44 0.005
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 44 0.006
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 44 0.006
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 44 0.006
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 44 0.006
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 44 0.006
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 44 0.006
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 44 0.006
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 43 0.008
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 43 0.010
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 42 0.014
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 42 0.014
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 42 0.014
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 42 0.014
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 42 0.014
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 42 0.014
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 42 0.014
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.014
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 42 0.014
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 42 0.014
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 42 0.018
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 42 0.018
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 42 0.018
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 42 0.018
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 42 0.024
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.024
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.024
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.024
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 42 0.024
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 42 0.024
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 42 0.024
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 42 0.024
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 42 0.024
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 41 0.032
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 41 0.032
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.032
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.032
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 41 0.032
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 41 0.032
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 41 0.032
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 41 0.032
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 41 0.042
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.042
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 41 0.042
UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 41 0.042
UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.042
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 40 0.056
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 40 0.056
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 40 0.056
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 40 0.056
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 40 0.056
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 40 0.056
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 40 0.056
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 40 0.056
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 40 0.074
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 40 0.074
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 40 0.074
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 40 0.074
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 40 0.074
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 40 0.074
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 40 0.074
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 40 0.097
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 40 0.097
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 40 0.097
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 40 0.097
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 40 0.097
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 40 0.097
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 40 0.097
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 40 0.097
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 40 0.097
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 40 0.097
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 40 0.097
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 40 0.097
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 39 0.13
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 39 0.13
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 39 0.13
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 39 0.13
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 39 0.13
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 39 0.13
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 39 0.13
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 39 0.13
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 39 0.13
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 39 0.13
UniRef50_Q23U17 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 39 0.13
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 39 0.13
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 39 0.13
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 39 0.13
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 39 0.17
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 39 0.17
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 39 0.17
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.17
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 39 0.17
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 39 0.17
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 39 0.17
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 39 0.17
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 39 0.17
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 38 0.23
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 38 0.23
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 38 0.23
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 38 0.23
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 38 0.23
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.23
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.23
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 38 0.23
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 38 0.23
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 38 0.23
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 38 0.23
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 38 0.23
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 38 0.23
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 38 0.23
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 38 0.23
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 38 0.30
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 38 0.30
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 38 0.30
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 38 0.30
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 38 0.30
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.30
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 38 0.30
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 38 0.30
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 38 0.30
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 38 0.30
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 38 0.30
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 38 0.30
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 38 0.30
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 38 0.30
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 38 0.30
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 38 0.30
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 38 0.39
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 38 0.39
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 38 0.39
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 38 0.39
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 38 0.39
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 38 0.39
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.39
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 38 0.39
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 38 0.39
UniRef50_Q5KLJ5 Cluster: Translation initiation factor, putative... 38 0.39
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 38 0.39
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 38 0.39
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 37 0.52
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 37 0.52
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 37 0.52
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 37 0.52
UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL' ... 37 0.52
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 37 0.52
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 37 0.69
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 37 0.69
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.69
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 37 0.69
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 37 0.69
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 37 0.69
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 37 0.69
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 37 0.69
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 37 0.69
UniRef50_Q93Y39 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 37 0.69
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 37 0.69
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 37 0.69
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 36 0.91
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 36 0.91
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 36 0.91
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 36 0.91
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 36 0.91
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 36 0.91
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 36 0.91
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 36 0.91
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 36 0.91
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 36 0.91
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 36 0.91
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 36 0.91
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 36 0.91
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 36 0.91
UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 36 0.91
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 36 0.91
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 36 1.2
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 36 1.2
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 36 1.2
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 36 1.2
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 36 1.2
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 36 1.2
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 36 1.2
UniRef50_Q4Q0X4 Cluster: ATP-dependent RNA helicase-like protein... 36 1.2
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 36 1.2
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 36 1.2
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 36 1.2
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 36 1.2
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 36 1.2
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 36 1.2
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 36 1.2
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 36 1.2
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 36 1.6
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 36 1.6
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 36 1.6
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 36 1.6
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 36 1.6
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 36 1.6
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 36 1.6
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 36 1.6
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 36 1.6
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 36 1.6
UniRef50_A7AN17 Cluster: DEAD/DEAH box helicase domain containin... 36 1.6
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 36 1.6
UniRef50_P15424 Cluster: ATP-dependent RNA helicase MSS116, mito... 36 1.6
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 36 1.6
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 36 1.6
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 35 2.1
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 35 2.1
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 35 2.1
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 35 2.1
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 35 2.1
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 35 2.1
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 35 2.1
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 35 2.1
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 35 2.1
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 35 2.1
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 35 2.1
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 35 2.1
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 35 2.1
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 35 2.1
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 35 2.1
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 35 2.1
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 35 2.1
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 35 2.1
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 35 2.1
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_A2R3A8 Cluster: Contig An14c0130, complete genome; n=1;... 35 2.1
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 35 2.1
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 35 2.1
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 35 2.1
UniRef50_UPI0000EBE106 Cluster: PREDICTED: similar to RNA helica... 35 2.8
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 35 2.8
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 35 2.8
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 35 2.8
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 35 2.8
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 35 2.8
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 35 2.8
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 35 2.8
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 35 2.8
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 35 2.8
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 35 2.8
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 35 2.8
UniRef50_A7ECJ8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 35 2.8
UniRef50_Q3E9C3 Cluster: DEAD-box ATP-dependent RNA helicase 58,... 35 2.8
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 35 2.8
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 35 2.8
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 35 2.8
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 35 2.8
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 35 2.8
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 35 2.8
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 34 3.7
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 34 3.7
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 34 3.7
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 34 3.7
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 34 3.7
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 34 3.7
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 34 3.7
UniRef50_Q0ATC2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 34 3.7
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 34 3.7
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 34 3.7
UniRef50_Q4QAV6 Cluster: ATP-dependent RNA helicase, putative; n... 34 3.7
UniRef50_Q389Z8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 34 3.7
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 34 3.7
UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.7
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 34 3.7
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 34 3.7
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 34 3.7
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 34 3.7
UniRef50_Q4P0P9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 34 3.7
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 34 3.7
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 34 4.8
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 34 4.8
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 34 4.8
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 34 4.8
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 34 4.8
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 34 4.8
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 34 4.8
UniRef50_Q04AN7 Cluster: ATP-dependent exoDNAse (Exonuclease V) ... 34 4.8
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 34 4.8
UniRef50_A6EJM8 Cluster: Possible ATP-dependent RNA helicase; n=... 34 4.8
UniRef50_A5D1P3 Cluster: ATP-dependent exoDNAse (Exonuclease V) ... 34 4.8
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 34 4.8
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 34 4.8
UniRef50_A2EF23 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 34 4.8
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 34 4.8
UniRef50_A5E2I8 Cluster: ATP-dependent rRNA helicase SPB4; n=3; ... 34 4.8
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 34 4.8
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 34 4.8
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 34 4.8
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 34 4.8
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 34 4.8
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 34 4.8
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 34 4.8
UniRef50_Q9H694 Cluster: Protein bicaudal C homolog 1; n=31; Eum... 34 4.8
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 33 6.4
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 33 6.4
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 33 6.4
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 33 6.4
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 33 6.4
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 33 6.4
UniRef50_Q00X54 Cluster: RNA Helicase; n=2; Ostreococcus|Rep: RN... 33 6.4
UniRef50_Q9NBW6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 33 6.4
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 33 6.4
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 33 6.4
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 33 6.4
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 33 6.4
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 33 6.4
UniRef50_Q3KSV2 Cluster: Epstein-Barr nuclear antigen 2; n=4; Hu... 33 6.4
UniRef50_P12978 Cluster: Epstein-Barr nuclear antigen 2; n=2; Hu... 33 6.4
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 33 6.4
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 33 6.4
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 33 6.4
UniRef50_Q5K7L2 Cluster: ATP-dependent RNA helicase DBP9; n=1; F... 33 6.4
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 33 8.5
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 33 8.5
UniRef50_Q9J894 Cluster: ORF41 alkaline exonuclease; n=3; Nucleo... 33 8.5
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 33 8.5
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 33 8.5
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 33 8.5
UniRef50_A4JFV0 Cluster: Putative uncharacterized protein precur... 33 8.5
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 33 8.5
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 33 8.5
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 33 8.5
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 33 8.5
UniRef50_Q5BRH8 Cluster: SJCHGC08229 protein; n=1; Schistosoma j... 33 8.5
UniRef50_Q55CN3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 33 8.5
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 33 8.5
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 33 8.5
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 33 8.5
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.5
UniRef50_A2DZA5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 33 8.5
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 33 8.5
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 33 8.5
UniRef50_Q92499 Cluster: ATP-dependent RNA helicase DDX1; n=56; ... 33 8.5
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 33 8.5
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 33 8.5
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 96.3 bits (229), Expect = 8e-19
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Frame = +3
Query: 342 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQ 515
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQ 61
Query: 516 RAIMPWHPRDAMLSLKPSQELEKLLLSLYRFYNKSIQAFVNVKL*SWXPTRELAPTNSEG 695
RAI+P +++ S + ++ I+ F + PTRELA +
Sbjct: 62 RAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIE-FKETQALVLAPTRELAQQIQK- 119
Query: 696 GDSSLVIT*MLNG--HACIGGTN 758
L + + HACIGGTN
Sbjct: 120 --VILALGDYMGATCHACIGGTN 140
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAGPNKFRRW**LLGDH 718
KG DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+L + R + ++ LGD+
Sbjct: 69 KGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVL-APTRELAQQIQKVILALGDY 127
Query: 719 LNA 727
+ A
Sbjct: 128 MGA 130
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 94.3 bits (224), Expect = 3e-18
Identities = 41/54 (75%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
Frame = +3
Query: 372 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 530
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+P
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILP 63
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KG DVIAQAQSGTGKTATF ISILQ+IDTS++E QALIL
Sbjct: 66 KGHDVIAQAQSGTGKTATFVISILQRIDTSLKETQALIL 104
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = +3
Query: 351 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIM 527
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAII 67
Query: 528 P 530
P
Sbjct: 68 P 68
Score = 60.5 bits (140), Expect = 5e-08
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KG DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+L
Sbjct: 71 KGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVL 109
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 68.9 bits (161), Expect = 1e-10
Identities = 49/112 (43%), Positives = 59/112 (52%)
Frame = +3
Query: 423 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKPSQELEKLLLSLY 602
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI +++ S + S+
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 603 RFYNKSIQAFVNVKL*SWXPTRELAPTNSEGGDSSLVIT*MLNGHACIGGTN 758
IQ L PTRELA + G +L + HACIGGTN
Sbjct: 96 VLQCLDIQVRETQAL-ILAPTRELA-VQIQKGLLALGDYMNVQCHACIGGTN 145
Score = 66.9 bits (156), Expect = 6e-10
Identities = 35/64 (54%), Positives = 46/64 (71%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAGPNKFRRW**LLGDH 718
KGRDVIAQ+QSGTGKTATFSIS+LQ +D +RE QALIL + + ++ LGD+
Sbjct: 74 KGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV-QIQKGLLALGDY 132
Query: 719 LNAK 730
+N +
Sbjct: 133 MNVQ 136
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 63.3 bits (147), Expect = 7e-09
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAGPNKFRRW**LLGDH 718
KG DVI QAQSGTGKTATF ILQQ++ + +CQAL+L + R + + LGDH
Sbjct: 48 KGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQALVL-APTRELAQQIEKVMRALGDH 106
Query: 719 LNAK 730
LN K
Sbjct: 107 LNVK 110
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 63.3 bits (147), Expect = 7e-09
Identities = 26/43 (60%), Positives = 36/43 (83%)
Frame = +3
Query: 402 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 530
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKP 89
Score = 52.8 bits (121), Expect = 1e-05
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+DV+AQAQSGTGKT TF+I LQ+ID + R+ Q +IL
Sbjct: 93 GKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIIL 130
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 62.1 bits (144), Expect = 2e-08
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Frame = +3
Query: 408 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP-WHPRDAMLSLKP-SQELE 581
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P D + + + +
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 582 KLLLSLYRFY---NKSIQAFVNVKL*SWXPTRELA 677
L++Y+ N+ +QA ++ PTRELA
Sbjct: 329 MFALTVYQMVDTSNREVQALIS------SPTRELA 357
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 61.3 bits (142), Expect = 3e-08
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +3
Query: 423 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAI 69
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQID 622
KGRDVIAQ+QSGTGKTATFS+S+LQ +D
Sbjct: 74 KGRDVIAQSQSGTGKTATFSVSVLQCLD 101
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 60.1 bits (139), Expect = 6e-08
Identities = 34/61 (55%), Positives = 39/61 (63%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAGPNKFRRW**LLGDH 718
KG+D IAQAQSGTGKTATFSI+ LQ IDTS QALIL + R +LG +
Sbjct: 70 KGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTRELAQQTITRIFFILGVN 129
Query: 719 L 721
L
Sbjct: 130 L 130
>UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1,; n=2;
Theria|Rep: PREDICTED: similar to eukaryotic translation
initiation factor 4A, isoform 1, - Monodelphis domestica
Length = 59
Score = 58.0 bits (134), Expect = 3e-07
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +3
Query: 396 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEK 497
G +++DW+++V++FDDMNL E LL GIYAYGFEK
Sbjct: 10 GVIESDWNEIVDSFDDMNLSESLLCGIYAYGFEK 43
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 56.8 bits (131), Expect = 6e-07
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +3
Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 530
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+P
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVP 54
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KG DVIAQ+QSGTGKTAT+ I+ LQ+ID + QA+IL
Sbjct: 57 KGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIIL 95
>UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic
initiation factor 4AI; n=1; Pan troglodytes|Rep:
PREDICTED: similar to eukaryotic initiation factor 4AI -
Pan troglodytes
Length = 151
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +2
Query: 536 SKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL 649
++G DVIAQAQSGTGK ATF+ISILQQI+ ++ QAL
Sbjct: 26 NEGYDVIAQAQSGTGKMATFAISILQQIELDLKATQAL 63
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 53.6 bits (123), Expect = 6e-06
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+GRDVI QAQ+GTGKTA F + +LQ+ID + R QAL+L
Sbjct: 41 EGRDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVL 79
Score = 37.1 bits (82), Expect = 0.52
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
VE+F D+ L+EELL+ I GF +PS IQ AI
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAI 36
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +3
Query: 444 MNLKEELLRGIYAYGFEKPSAIQQRAIMPW 533
M LKE LLRGIYAYG EKPSAIQQ+ I+P+
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPF 30
Score = 44.0 bits (99), Expect = 0.005
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
KG DVI QAQSGTGKTATF ILQQ+
Sbjct: 32 KGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
RD++ QAQ+GTGKTA F I IL+ ID S R QALIL
Sbjct: 41 RDIVGQAQTGTGKTAAFGIPILETIDESSRNTQALIL 77
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L +GRDV+ AQ+GTGKTA F++ IL ID +R QAL+L
Sbjct: 42 LLLEGRDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVL 83
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 50.0 bits (114), Expect = 7e-05
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A +G+D+I QAQ+GTGKTA F+I IL +D SI Q L++
Sbjct: 35 AFEGKDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVI 75
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPW 533
F MN+K E+L+ + GFEKP+ IQ+ A++P+
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQE-AVLPF 34
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 50.0 bits (114), Expect = 7e-05
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
LA K +D+I Q+Q+G+GKT + + I Q+ID+S RE QALIL
Sbjct: 36 LALKNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKRETQALIL 77
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 50.0 bits (114), Expect = 7e-05
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
R VIAQAQSGTGKT FSI +L +ID S + QAL+L
Sbjct: 131 RHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVL 167
Score = 46.4 bits (105), Expect = 8e-04
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 366 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
SY+ P D +W V+ FD M+L LL+G+Y+YGF PS IQ AI
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAI 122
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 50.0 bits (114), Expect = 7e-05
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A GRD++A+A++GTGKTA+F I L +I+TS+ QALIL
Sbjct: 69 MALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALIL 110
Score = 47.6 bits (108), Expect = 4e-04
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +3
Query: 360 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI-MPWH 536
QG P + P T D Q F+D L+ ELL GIY GFE+PS IQ++AI M
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT 72
Query: 537 PRDAMLSLKPSQELEKLLLSLYRFYNKSIQAFVNVKL*SWXPTRELAPTNSE 692
RD + K K + N+ + +++ PTRELA S+
Sbjct: 73 GRDILARAK--NGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQ 122
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 50.0 bits (114), Expect = 7e-05
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Frame = +3
Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPWHPRDAMLSLKPS 569
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+ M HP +++ S
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQS 145
Score = 35.5 bits (78), Expect = 1.6
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQID 622
LA +++IAQ+QSGTGKTA F +++L +++
Sbjct: 132 LAHPPQNLIAQSQSGTGKTAAFVLAMLSRVN 162
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/39 (53%), Positives = 30/39 (76%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+GRDV+ QAQ+GTGKTA F++ +L ++D RE Q L+L
Sbjct: 45 EGRDVLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVL 83
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L S+ D+I QAQ+GTGKTA F + I+Q+I+ +++ QALIL
Sbjct: 36 LLSQDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALIL 77
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 48.8 bits (111), Expect = 2e-04
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRDV+ Q+Q+GTGKTA FS+ IL+++D + QA++L
Sbjct: 40 GRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVL 77
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KG DVI QAQ+GTGKT F I I+++I+ I++ Q+LIL
Sbjct: 39 KGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLIL 77
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 48.8 bits (111), Expect = 2e-04
Identities = 20/41 (48%), Positives = 32/41 (78%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A KGRD+I Q+Q+GTGKT +F + I+Q ++ ++E QA+I+
Sbjct: 36 ALKGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIV 76
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+DV QA++G+GKTA F + +LQQID S+ + QAL+L
Sbjct: 40 GKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVL 77
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L +GRD IA AQ+GTGKTA F++ ILQ + I QALIL
Sbjct: 39 LILQGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALIL 80
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 405 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 530
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQP 71
Score = 44.8 bits (101), Expect = 0.003
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAGPNKFRRW 697
GRD+ AQAQSGTGKT F+++ LQ D S Q L+L S + R+
Sbjct: 75 GRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARF 126
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ 643
A G+DVI QA++GTGKTA FSI IL+Q+D S+ +C+
Sbjct: 78 ALNGKDVIGQARTGTGKTAAFSIPILEQLD-SLEDCR 113
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G DVIAQA +G+GKTA F + +LQ++D ++ QAL+L
Sbjct: 62 RGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVL 100
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+DV+ +AQ+GTGKTA F + L +IDTSI++ Q ++L
Sbjct: 52 GKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVL 89
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 48.0 bits (109), Expect = 3e-04
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Frame = +3
Query: 423 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPW-HPRDAML-SLKPSQELEKLLLS 596
+ TF+ M L++ELLRGI A+GF +P +QQRA++P RD ++ + + + + + LS
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 597 LYRFYNKSIQ 626
+ ++ S++
Sbjct: 80 VLSIFDLSVK 89
Score = 40.3 bits (90), Expect = 0.056
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKR 670
+GRDV+ Q TGKT S+S+L D S+++ Q LIL ++
Sbjct: 58 QGRDVVIQNFRSTGKTTVMSLSVLSIFDLSVKKIQVLILQKTRK 101
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 47.6 bits (108), Expect = 4e-04
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L + DV+A AQ+GTGKTA F + +LQQID R Q+LIL
Sbjct: 36 LLGENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLIL 77
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 47.2 bits (107), Expect = 5e-04
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
LA + +DVI Q+ +G+GKT + + I Q+IDTS RE QA+IL
Sbjct: 36 LALENKDVIGQSPTGSGKTLAYLLPIFQKIDTSKREMQAIIL 77
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 47.2 bits (107), Expect = 5e-04
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G D+I QAQ+GTGKTA F++ +L +ID + RE Q LIL
Sbjct: 60 GHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLIL 97
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 47.2 bits (107), Expect = 5e-04
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+D+ QAQ+GTGKTA F I ++ +D SI + Q+LIL
Sbjct: 38 GKDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLIL 75
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +3
Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
V TF ++NLKE LL+GI A GF KPS IQ+RA+
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERAL 107
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = +2
Query: 521 NNALASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
++ ++ +++IAQ+QSGTGKTATF +++L +I T + CQ L +
Sbjct: 108 SSLISDNPQNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCM 152
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 46.8 bits (106), Expect = 6e-04
Identities = 18/39 (46%), Positives = 30/39 (76%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G+DV+ +AQ+GTGKTA F + L +ID S+++ Q L++
Sbjct: 44 EGQDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVV 82
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L K D++A AQ+GTGKTA F ++Q+ID + R QALIL
Sbjct: 36 LLEKDIDLVALAQTGTGKTAAFGFPVIQKIDANNRNTQALIL 77
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
F+ + L E LLR I GFE P+ +Q++AI
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAI 33
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/38 (55%), Positives = 29/38 (76%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DV+ AQ+GTGKTA FS+ +L +IDT+ + QAL+L
Sbjct: 42 GNDVLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVL 79
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 46.8 bits (106), Expect = 6e-04
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+DV QAQ+GTGKTA F I I++++D + QAL+L
Sbjct: 42 GKDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVL 79
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L ++ RD++A AQ+GTGKTA F +LQ ID S + Q LI+
Sbjct: 35 LLAEDRDMVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLII 76
Score = 33.9 bits (74), Expect = 4.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
TFD + L LL+ I GFE PS IQ+ AI
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAI 32
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 46.4 bits (105), Expect = 8e-04
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A +G+D+I QAQ+GTGKTA F + +L ++DT Q +++
Sbjct: 36 ALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVI 76
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAG 676
++V+ AQ+GTGKTA F + +LQQI+ S+++ Q L+L + G
Sbjct: 40 KNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELG 83
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +3
Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAAL 101
Score = 41.5 bits (93), Expect = 0.024
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 548 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAGPNKF 688
++IAQ+QSGTGKTA F++ +L +D SI QA+ + K F
Sbjct: 110 NLIAQSQSGTGKTAAFTLGMLNCVDPSINAPQAICISPTKELALQTF 156
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRDV+ AQ+G+GKTA FS+ +LQ +D ++ Q L+L
Sbjct: 43 GRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVL 80
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G+DVI QAQ+GTGKTA F + I++++ R QAL+L
Sbjct: 42 QGKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVL 80
Score = 33.5 bits (73), Expect = 6.4
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
TF D+ L E++L+ + GFE+PS IQ +AI
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAI 37
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DVIAQA+SGTGKT TF + L+++D R QAL L
Sbjct: 74 GCDVIAQAKSGTGKTMTFVVIALERVDAGRRRTQALAL 111
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +3
Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
V++F+D+ LK ELL GI + GF KPS+IQ+RA+
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERAL 79
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/42 (47%), Positives = 32/42 (76%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L ++ +++IAQ+QSGTGKTATF +++L +ID + CQ L +
Sbjct: 83 LENQPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCM 124
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DVI QAQ+GTGKTA F I +++++ T R QALIL
Sbjct: 43 GGDVIGQAQTGTGKTAAFGIPVVEKVSTG-RHVQALIL 79
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KG+D+I AQ+GTGKTA F+I ++ ++ + QALIL
Sbjct: 45 KGKDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALIL 83
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L RDV+ QAQ+GTGKTA+F++ IL +ID QAL+L
Sbjct: 40 LLLNNRDVLGQAQTGTGKTASFALPILARIDIKQTTPQALVL 81
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/44 (52%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALIL 655
LA +GRDV+ QA++GTGKTA F I I+++++ + R QALIL
Sbjct: 37 LALEGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALIL 80
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +3
Query: 423 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
V E F DM L +ELL+ IY GFEKPS IQ+ AI
Sbjct: 49 VAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAI 82
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G D+I QAQ+GTGKTA F + +L ID S + QAL+L
Sbjct: 92 GSDLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVL 129
Score = 33.5 bits (73), Expect = 6.4
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
+F D NLK +L+ + GF +P+ IQ++AI
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAI 86
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L S +VI QAQ+GTGKTA F I +++++D + QAL+L
Sbjct: 36 LLSGKNNVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVL 77
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DVI QA+SG GKTA F +S LQQI+ S + AL+L
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVL 120
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A GRD++A+A++GTGKTA F I L+++ + + QALI+
Sbjct: 79 VAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIM 120
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
TF+D LK ELL GI+ GFEKPS IQ+ AI
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAI 77
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/38 (44%), Positives = 30/38 (78%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRD++ QAQ+GTGKTA F++ +L+++++ + Q L+L
Sbjct: 108 GRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVL 145
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KG++VI +A++GTGKT + + I+++ID S E QA+IL
Sbjct: 38 KGKNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIIL 76
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+DV QAQ+GTGKTA F I +L+ ID+ QA+IL
Sbjct: 42 KDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIIL 78
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+D+I QA++GTGKT F + IL++ID + QALI+
Sbjct: 42 GKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIV 79
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 44.0 bits (99), Expect = 0.005
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G D++ +AQ+GTGKTA F++ +L ++D +++ Q L+L
Sbjct: 81 GHDLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVL 118
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 44.0 bits (99), Expect = 0.005
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G+DV+ AQ+GTGKTA F++ +L + +RE Q L+L
Sbjct: 42 EGKDVLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVL 80
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/39 (48%), Positives = 29/39 (74%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+ +D++ +Q+GTGKT + + I ++IDTS RE QALIL
Sbjct: 38 QNKDLLINSQTGTGKTLAYLLPIFEKIDTSKRETQALIL 76
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 44.0 bits (99), Expect = 0.005
Identities = 17/33 (51%), Positives = 28/33 (84%)
Frame = +3
Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
V++F ++NL E+L++GI A GF+KPS IQ++A+
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKAL 179
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/42 (42%), Positives = 32/42 (76%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L++ R++I Q+QSGTGKTA F++++L ++D +I QA+ +
Sbjct: 183 LSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICI 224
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/39 (51%), Positives = 32/39 (82%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+
Sbjct: 81 QGKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALII 118
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L + D I A +GTGKTA F I +++ ID+++++ QAL+L
Sbjct: 78 LLAGANDFIGLASTGTGKTAAFGIPLIENIDSTVKDTQALVL 119
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 43.6 bits (98), Expect = 0.006
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2
Query: 548 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
D I AQ+GTGKTA F + +L ID + RE QALIL
Sbjct: 53 DFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQALIL 88
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 43.6 bits (98), Expect = 0.006
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTS 628
A G D++ QA+SG GKTA F +SILQQ+DT+
Sbjct: 89 AITGTDILCQAKSGMGKTAVFVLSILQQLDTN 120
Score = 34.7 bits (76), Expect = 2.8
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
F D LK ELLR I GFE PS +QQ I
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETI 86
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 43.6 bits (98), Expect = 0.006
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L+ + +DVI QAQ+GTGKTA F I I+++++ QAL++
Sbjct: 35 LSLQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVV 76
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 43.6 bits (98), Expect = 0.006
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DV+ AQ+GTGKTA F+I +L +ID + + QAL+L
Sbjct: 50 GSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVL 87
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 43.6 bits (98), Expect = 0.006
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +3
Query: 429 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
++FD++ L ELL+GIYA F+KPS IQ+RA+
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERAL 123
Score = 39.9 bits (89), Expect = 0.074
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
R++IAQ+QSGTGKTA FS+++L +++ QA+ L
Sbjct: 132 RNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICL 168
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 43.2 bits (97), Expect = 0.008
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 548 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
D++ AQ+GTGKTA F I ++Q DT ++ QAL+L
Sbjct: 42 DLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVL 77
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 42.7 bits (96), Expect = 0.010
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +3
Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
V++F+++ LK ELL+G+Y GF +PS IQ+ A+
Sbjct: 37 VKSFEELRLKPELLKGVYQMGFNRPSRIQENAL 69
Score = 35.1 bits (77), Expect = 2.1
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A +++IAQ+QSGTGKTA F +++L ++ + + Q L +
Sbjct: 73 MAQPAQNLIAQSQSGTGKTAAFCLAMLGIVNPADKWPQCLCI 114
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 42.3 bits (95), Expect = 0.014
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAG---PNKFRR 694
A G+DV+ QA++GTGKTA F +S+L Q+ + L+L + N+F+R
Sbjct: 72 AIHGKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEFKR 128
Score = 37.5 bits (83), Expect = 0.39
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI-MPWHPRDAMLSLK 563
+F+D +LK++LLR + GFE+PS +Q + I H +D + K
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAK 83
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A GRD++A+A++GTGK+ + I +L++ID QAL+L
Sbjct: 122 IALSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVL 163
Score = 39.1 bits (87), Expect = 0.13
Identities = 45/116 (38%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI-MPWHPRDAMLSLK--PSQELEKLLLSLYR 605
F+D LK ELL GI+ G+EKPS IQ+ +I + RD + K + L+ L R
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 606 FYNKS--IQAFVNVKL*SWXPTRELAPTNSEGGDSSLVIT*MLNG---HACIGGTN 758
K IQA V V PTRELA S+ S+ I L G A GGTN
Sbjct: 151 IDLKKDHIQALVLV------PTRELALQVSQ---ISIQIAKHLGGVKVMATTGGTN 197
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 42.3 bits (95), Expect = 0.014
Identities = 17/39 (43%), Positives = 30/39 (76%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+GRD + +AQ+GTGKTA FS+ +L +++ S + QA+++
Sbjct: 62 EGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVM 100
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 42.3 bits (95), Expect = 0.014
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+D+I QA++G+GKTA FS+ IL +I+ QALIL
Sbjct: 84 GKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALIL 121
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 42.3 bits (95), Expect = 0.014
Identities = 19/42 (45%), Positives = 31/42 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L K +D+IA +Q+G+GKTAT +I I +++T + + QALI+
Sbjct: 48 LIQKKQDLIALSQTGSGKTATCAIPICNRVNTELTDIQALII 89
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 42.3 bits (95), Expect = 0.014
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A +D+I ++ +GTGKT F + ILQ ++T +++ QA+IL
Sbjct: 34 VALNSQDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIIL 75
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 42.3 bits (95), Expect = 0.014
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
RDV+ AQ+GTGKTA F + +L +D R QAL+L
Sbjct: 83 RDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVL 119
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 42.3 bits (95), Expect = 0.014
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL-XSHKRA 673
L +G+D+IA++ +GTGKT + I IL +ID + QA+IL SH+ A
Sbjct: 43 LILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELA 91
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 42.3 bits (95), Expect = 0.014
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
RDV+A+A++GTGKT +F I ILQ ++ + QAL+L
Sbjct: 59 RDVVARAKNGTGKTGSFLIPILQMVNPAKDHIQALVL 95
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 42.3 bits (95), Expect = 0.014
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DV+ AQ+G+GKTA F++ +L QID S + Q L++
Sbjct: 42 GNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVM 79
Score = 33.9 bits (74), Expect = 4.8
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
TF+D+ L E +L+ + GFE PS IQQ I
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCI 36
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 41.9 bits (94), Expect = 0.018
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G D+I +A+SGTGKTA F I L+ ID I Q +IL
Sbjct: 61 GFDLIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIIL 98
Score = 34.3 bits (75), Expect = 3.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
TF M L +++L G+ GF KPS IQ ++I
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSI 55
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A +G+D+I ++++GTGKTA F + +L++I R +ALIL
Sbjct: 63 AIEGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALIL 103
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 41.9 bits (94), Expect = 0.018
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+D+I QAQ+GTGKTA F + +L +I+ +I Q LIL
Sbjct: 50 KDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLIL 86
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L +DVI QAQ+GTGKTA F I ++++I+ QA+++
Sbjct: 36 LGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVI 77
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 41.5 bits (93), Expect = 0.024
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRE 637
GRDV+ QAQ+GTGKTA F++ ++ +D + R+
Sbjct: 44 GRDVLGQAQTGTGKTAAFALPLINNMDLASRD 75
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 41.5 bits (93), Expect = 0.024
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +2
Query: 536 SKGRDVIAQAQSGTGKTATFSISILQQID 622
S +D+IAQAQ+GTGKTA F I +L++ID
Sbjct: 54 STDKDLIAQAQTGTGKTAAFGIPLLERID 82
Score = 34.3 bits (75), Expect = 3.7
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 429 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPW 533
E F+D L EE+L I G+EKP+ I Q+ ++P+
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEI-QKIVLPY 51
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 41.5 bits (93), Expect = 0.024
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
RDV+AQAQ+GTGKT F + IL++++ QALI+
Sbjct: 41 RDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALII 77
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 41.5 bits (93), Expect = 0.024
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 497 TFCNPATRNNA-LASKGRDVIAQAQSGTGKTATFSISILQQI 619
T C P LA G+DV QAQ+GTGKTATF ISI ++
Sbjct: 22 TQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTKL 63
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 41.5 bits (93), Expect = 0.024
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 548 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAG 676
D++A A++GTGKTA F + +LQ ID + QA+IL + G
Sbjct: 43 DIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELG 85
>UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09528 protein - Schistosoma
japonicum (Blood fluke)
Length = 454
Score = 41.5 bits (93), Expect = 0.024
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G DV+A A++G+GKTA F I ILQ + T ++ ALI+
Sbjct: 37 EGNDVVACAKTGSGKTAAFLIPILQSLMTELKPLYALII 75
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 41.5 bits (93), Expect = 0.024
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KGRD+IA A++G+GKTA+F+I IL Q+ A+IL
Sbjct: 40 KGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVIL 78
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 41.5 bits (93), Expect = 0.024
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A +GRD+IA A++G+GKTA F + ILQ++ + ALIL
Sbjct: 85 ALQGRDIIALAETGSGKTAAFGLPILQRLLQRTQRFYALIL 125
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 41.5 bits (93), Expect = 0.024
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
LA +G+D+I QA++GTGKTA F I +++ I + + Q L++
Sbjct: 35 LAMEGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGLVV 76
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 41.1 bits (92), Expect = 0.032
Identities = 22/54 (40%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI---DTSIRE--CQALILXSHKRAG 676
LA +G+D++A+A++G+GKTA +++ ++Q+I S+RE +ALIL K G
Sbjct: 39 LALEGKDLLARARTGSGKTAAYAVPVIQRILASKQSVREQDVKALILVPTKELG 92
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 41.1 bits (92), Expect = 0.032
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
+A +G D+ A AQ+GTGKTA FS+ ++QQ+
Sbjct: 34 VARRGHDIFATAQTGTGKTAAFSLPLIQQL 63
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 41.1 bits (92), Expect = 0.032
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G ++ AQ+GTGKTA F++ +L +ID ++ E Q L+L
Sbjct: 61 GNHLLGVAQTGTGKTAAFALPLLSRIDANVAEPQILVL 98
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 41.1 bits (92), Expect = 0.032
Identities = 16/30 (53%), Positives = 27/30 (90%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
LA +G+D++A AQ+GTGKTA+F++ +L+Q+
Sbjct: 55 LALEGKDIMACAQTGTGKTASFALPVLEQL 84
>UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 617
Score = 41.1 bits (92), Expect = 0.032
Identities = 20/40 (50%), Positives = 30/40 (75%), Gaps = 3/40 (7%)
Frame = +2
Query: 527 ALASKGRDVIAQAQSGTGKTATFSISILQQI---DTSIRE 637
A A KG+D++AQA++GTGKT F I ++Q+I D S++E
Sbjct: 10 APALKGKDLVAQAKTGTGKTLAFLIPVIQKILDADPSLKE 49
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 41.1 bits (92), Expect = 0.032
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DV+ +AQ+GTGKTA F+I +L+ ++ R QALI+
Sbjct: 41 GMDVVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALII 77
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 41.1 bits (92), Expect = 0.032
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
GRDV+ QA +GTGKT +SIS+LQ+I
Sbjct: 39 GRDVVGQAHTGTGKTGAYSISMLQEI 64
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 41.1 bits (92), Expect = 0.032
Identities = 18/41 (43%), Positives = 30/41 (73%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A +G+D++ A++G+GKTA F+I ILQ + T+ + AL+L
Sbjct: 132 ALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVL 172
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 40.7 bits (91), Expect = 0.042
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDT 625
GRD+I +AQ+GTGKTA F I++LQ++ T
Sbjct: 135 GRDIIGKAQTGTGKTAAFLITVLQKLLT 162
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 40.7 bits (91), Expect = 0.042
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+DVI ++++GTGKTA F+I IL++I R AL++
Sbjct: 57 GKDVIVRSKTGTGKTAAFAIPILERIADGRRRPSALVM 94
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 40.7 bits (91), Expect = 0.042
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRDV AQ+GTGKTA F++ IL ++ R + L+L
Sbjct: 170 GRDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVL 207
>UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 601
Score = 40.7 bits (91), Expect = 0.042
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDT 625
LA KGRD+ Q+Q+GTGKT F I ++Q+I T
Sbjct: 44 LAMKGRDLAIQSQTGTGKTGAFLIPVIQRIIT 75
>UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1220
Score = 40.7 bits (91), Expect = 0.042
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 345 GPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
GP+ D+ + GT + VV ++ +NL +LLR I YG P+ IQQRA
Sbjct: 618 GPNLDEAAPGTTNAAQAGTGMIQPNAVVSKWEHLNLHPDLLRSILKYGLGPPNKIQQRA- 676
Query: 525 MPWHPR--DAMLSLKPSQE 575
+P+ R D + P+QE
Sbjct: 677 LPFLLRGSDIIAQAPPTQE 695
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 40.3 bits (90), Expect = 0.056
Identities = 15/42 (35%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A GRD++A+A++GTGK+ + I +L+++D QA+++
Sbjct: 114 IALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVI 155
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 40.3 bits (90), Expect = 0.056
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 637
+GRDV+A AQ+GTGKTA + + ++Q + RE
Sbjct: 39 QGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSRE 71
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 40.3 bits (90), Expect = 0.056
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A +G DVI QA++G+GKTA F + IL++ S + QAL+L
Sbjct: 38 IARQGTDVIGQARTGSGKTAAFGLPILERCQPS-GKLQALVL 78
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 40.3 bits (90), Expect = 0.056
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G+D + +A++GTGKTA F+I LQ + ++ Q LIL
Sbjct: 41 QGQDALVRAKTGTGKTAAFAIPALQHLRAEVQHPQVLIL 79
Score = 33.5 bits (73), Expect = 6.4
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
F D+ LK+ +L IY G++KP+ IQ +++
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSL 36
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 40.3 bits (90), Expect = 0.056
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+D+IAQA++GTGKTA F + +L ++ Q LIL
Sbjct: 41 GKDLIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQVLIL 78
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 40.3 bits (90), Expect = 0.056
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A +G+DVI QAQ+G+GKT F I L++I+ + QA++L
Sbjct: 38 ALQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIML 78
>UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 486
Score = 40.3 bits (90), Expect = 0.056
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAG 676
GRD I AQ+G+GKT T+ + I ++T I QALI+ + G
Sbjct: 120 GRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELG 164
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 40.3 bits (90), Expect = 0.056
Identities = 15/42 (35%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A GRD++A+A++GTGK+ + I +L+++D QA+++
Sbjct: 129 IALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVI 170
Score = 38.3 bits (85), Expect = 0.23
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
F+D LK ELL GI+ G+EKPS IQ+ +I
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESI 127
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 39.9 bits (89), Expect = 0.074
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
LA +G D++ QA +GTGKT F+I I++++ + +AL+L
Sbjct: 33 LALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVL 74
>UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56; n=1; Danio rerio|Rep: DEAD
(Asp-Glu-Ala-Asp) box polypeptide 56 - Danio rerio
Length = 344
Score = 39.9 bits (89), Expect = 0.074
Identities = 20/54 (37%), Positives = 39/54 (72%), Gaps = 5/54 (9%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTS---IRE--CQALILXSHKRAG 676
LA +G+D++A+A++G+GKTA +++ ++Q++ TS +RE +A++L K G
Sbjct: 23 LALEGKDLLARARTGSGKTAAYAVPLIQRVLTSKQTVREQAVRAVVLVPTKELG 76
>UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein
precursor; n=1; Ralstonia metallidurans CH34|Rep:
DEAD/DEAH box helicase-like protein precursor -
Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM
2839)
Length = 227
Score = 39.9 bits (89), Expect = 0.074
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A GRD+I QA G+G+T F++++L +D + QAL+L
Sbjct: 50 ALAGRDLIVQASPGSGRTVAFTVALLHHLDPRRFDVQALVL 90
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 39.9 bits (89), Expect = 0.074
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +2
Query: 548 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
D I AQ+GTGKTA F + +L ID + QALIL
Sbjct: 42 DFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALIL 77
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 39.9 bits (89), Expect = 0.074
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KGRD+I Q+ SGTGKT + I Q+ SI Q LIL
Sbjct: 46 KGRDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLIL 84
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 39.9 bits (89), Expect = 0.074
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 420 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
+V T++ M LK EL+ I G+EKPS IQQRAI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAI 51
Score = 37.9 bits (84), Expect = 0.30
Identities = 15/42 (35%), Positives = 31/42 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+ S+G++++ Q+Q+G+GKTATFSI L ++ + + + +I+
Sbjct: 53 IISQGKNIMFQSQNGSGKTATFSIGTLARLRLTSKTTELIIV 94
>UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;
Neurospora crassa|Rep: CYT-19 DEAD-box protein precursor
- Neurospora crassa
Length = 626
Score = 39.9 bits (89), Expect = 0.074
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDT 625
A KG+D++AQA++GTGKT F + ++Q+I T
Sbjct: 109 ALKGKDIVAQAKTGTGKTLGFLVPVIQKIIT 139
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 39.5 bits (88), Expect = 0.097
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G D+I +A+SGTGKT F I L+ ID I Q LIL
Sbjct: 33 GFDLIMRAKSGTGKTLVFCIISLEMIDIDISSVQVLIL 70
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 39.5 bits (88), Expect = 0.097
Identities = 19/40 (47%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALIL 655
+GRDV+ AQ+GTGKTA +++ +LQQ+ + + +ALIL
Sbjct: 49 QGRDVVGLAQTGTGKTAAYALPLLQQLTEGPPGQLRALIL 88
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 39.5 bits (88), Expect = 0.097
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+D+I QA+SGTGKT FS+ L+ ID + Q LIL
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLIL 40
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 39.5 bits (88), Expect = 0.097
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KG++++ Q+QSG+GKT F +S LQ I+ CQ +I+
Sbjct: 61 KGKNLVMQSQSGSGKTMAFLLSTLQLINRKDPFCQVIII 99
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 39.5 bits (88), Expect = 0.097
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTS 628
+A +G D+I QAQ+GTGKTA F +I+ D S
Sbjct: 37 VALEGHDIIGQAQTGTGKTAAFGCAIINNADFS 69
Score = 37.9 bits (84), Expect = 0.30
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
FDD+ LKE LL+ I GFE+PS IQ +I
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESI 35
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 39.5 bits (88), Expect = 0.097
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L KG D++ A +G+GKTA F + +LQ ID R Q LI+
Sbjct: 39 LLLKGCDLLGMAHTGSGKTAAFLLPLLQNIDIKQRFVQGLII 80
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 39.5 bits (88), Expect = 0.097
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
GRDV+ AQ+GTGKTA+FS+ I+Q++
Sbjct: 48 GRDVMGAAQTGTGKTASFSLPIIQRL 73
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 39.5 bits (88), Expect = 0.097
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
LA +G+D+IA++++G+GKTA F+I I + I QAL+L
Sbjct: 37 LALEGKDIIAKSKTGSGKTAAFAIPICESIVWEENLPQALVL 78
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 39.5 bits (88), Expect = 0.097
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
+G DV+A AQ+GTGKTA F++ ILQ++
Sbjct: 37 RGEDVLASAQTGTGKTAAFALPILQKM 63
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 39.5 bits (88), Expect = 0.097
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+D+I ++Q+G+GKTA F+I I Q +D + QAL+L
Sbjct: 42 KDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVL 78
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 39.5 bits (88), Expect = 0.097
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 530
F D NL+EE+L+ I + GFE PS +Q AI P
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPP 161
Score = 39.1 bits (87), Expect = 0.13
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALIL 655
A + +DVI QA+SG GKTA F +S+L ID + + QAL+L
Sbjct: 162 ALEHKDVICQAKSGKGKTAVFVLSLLHMIDPQAAPHKVQALVL 204
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 39.5 bits (88), Expect = 0.097
Identities = 17/43 (39%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Frame = +2
Query: 500 FCNPA---TRNNALASKGRDVIAQAQSGTGKTATFSISILQQI 619
F NP+ +++ L+ +G+D++A+A++G+GKTA +SI I+Q++
Sbjct: 43 FQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQKV 85
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 39.1 bits (87), Expect = 0.13
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRDV+ QAQ+GTGKTA F++ +L + + + Q L+L
Sbjct: 52 GRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVL 89
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALI 652
+ KG+ VI Q+Q+G+GKT TF + ++ ++ +I E Q +I
Sbjct: 35 IIKKGKSVIGQSQTGSGKTHTFLLPLMDKVKPTIDEVQIVI 75
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 39.1 bits (87), Expect = 0.13
Identities = 15/39 (38%), Positives = 30/39 (76%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G+++ ++ +GTGKTA+F + IL++I+ + R QA+I+
Sbjct: 37 EGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIM 75
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
L G+DVIA++ +GTGKT +++ +L++I + QA+IL
Sbjct: 37 LIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVIL 78
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/39 (41%), Positives = 29/39 (74%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
K ++I Q+Q+GTGK+ F + ++Q ID+ I+E QA+++
Sbjct: 40 KRTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVV 78
>UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP-dependent RNA
helicase - Lentisphaera araneosa HTCC2155
Length = 542
Score = 39.1 bits (87), Expect = 0.13
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 500 FCNPATRNNA-LASKGRDVIAQAQSGTGKTATFSISI 607
FC P ++ KG+DV A+AQ+GTGKTA F IS+
Sbjct: 137 FCTPVQEGVLPISLKGQDVAAKAQTGTGKTAAFLISM 173
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 39.1 bits (87), Expect = 0.13
Identities = 15/38 (39%), Positives = 28/38 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRD++ Q+++G+GKT F + +L+++D + QAL+L
Sbjct: 74 GRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVL 111
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRD++ QA+SGTGKT FS+ ++ +D Q +I+
Sbjct: 51 GRDMLVQAKSGTGKTLVFSVLAVENLDLKAHYIQKVII 88
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/36 (47%), Positives = 28/36 (77%)
Frame = +2
Query: 548 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
++IAQA +G+GKTATF++++L ++DT I Q + L
Sbjct: 152 NLIAQAHNGSGKTATFALAMLGKVDTRIIHPQCMCL 187
Score = 36.3 bits (80), Expect = 0.91
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
+ D+NL +LL+GIY GF +PS IQ A+
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAAL 143
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 39.1 bits (87), Expect = 0.13
Identities = 15/36 (41%), Positives = 30/36 (83%)
Frame = +2
Query: 548 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
++IAQA++G+GKTATF++++L +++ ++ QAL +
Sbjct: 139 NIIAQAKNGSGKTATFALAMLSKVNVNVPLVQALCI 174
>UniRef50_Q23U17 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 64
Score = 39.1 bits (87), Expect = 0.13
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 6/43 (13%)
Frame = +3
Query: 402 LDTDWDQVVETFDDMNLKEELLRGIYA------YGFEKPSAIQ 512
++T+W + V++F + LKE+LLRGIY Y F++P++IQ
Sbjct: 16 IETNWFESVDSFHKLQLKEDLLRGIYGKRFIFQYRFKQPTSIQ 58
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 39.1 bits (87), Expect = 0.13
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+
Sbjct: 59 GRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIV 96
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKR 670
G +I QA++GTGKTA F +++L I+T + + L++ +H R
Sbjct: 110 GEQLICQAKAGTGKTAVFVLTVLNTINTESNKVECLVI-THTR 151
Score = 33.1 bits (72), Expect = 8.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
V F + LKEELLR + GFE P+ +Q ++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESL 104
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 39.1 bits (87), Expect = 0.13
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKR 670
G D++ QA+SG GKTA F ++ LQQ++ S +++ H R
Sbjct: 78 GMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTR 120
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 39.1 bits (87), Expect = 0.13
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALIL 655
L++ R++IAQ+QSGTGKT F ++IL ++D + QAL L
Sbjct: 131 LSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALAL 173
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 554 IAQAQSGTGKTATFSISILQQIDTSIRECQA 646
I+ + SGTG TATF+ISILQQID ++ +A
Sbjct: 182 ISCSPSGTGNTATFAISILQQIDLDLKATKA 212
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 38.7 bits (86), Expect = 0.17
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
GRDV+ AQ+G+GKTA F++ +LQQ+
Sbjct: 42 GRDVVGSAQTGSGKTAAFALPMLQQL 67
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 38.7 bits (86), Expect = 0.17
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A G D++ QAQ+GTGKTA+F I IL ++ QAL+L
Sbjct: 37 IAMAGLDLMGQAQTGTGKTASFGIPILNRVIKG-EGLQALVL 77
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 38.7 bits (86), Expect = 0.17
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+DVIA+A +GTGKT F I +++ ID QAL+L
Sbjct: 50 KDVIAKAPTGTGKTFAFGIPMVEHIDPESDAVQALVL 86
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 38.7 bits (86), Expect = 0.17
Identities = 14/32 (43%), Positives = 26/32 (81%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDT 625
L +G+D++A++Q+GTGKT FS ++++I+T
Sbjct: 34 LIQEGKDLLAESQTGTGKTLAFSFPLIERINT 65
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 38.7 bits (86), Expect = 0.17
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHK 667
+G+ + AQ+G+GKTA F IS+L ++ CQA+I+ K
Sbjct: 39 QGQSISVNAQTGSGKTAAFGISLLSLVNPQKSICQAVIISPTK 81
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 38.7 bits (86), Expect = 0.17
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDT 625
+GRD++A AQ+GTGKTA F++ +LQ + T
Sbjct: 37 EGRDLMASAQTGTGKTAGFTLPLLQHLIT 65
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 38.7 bits (86), Expect = 0.17
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
+G+D I +AQ+GTGKTA F ISI+ Q+
Sbjct: 45 RGQDAIGRAQTGTGKTAAFLISIISQL 71
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 38.7 bits (86), Expect = 0.17
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+ +IAQA +G+GKT F + +L ++D ++RE QAL +
Sbjct: 132 KHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCI 168
Score = 33.9 bits (74), Expect = 4.8
Identities = 15/27 (55%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYA-YGFEKPSAIQ 512
F+D+NL EL++G+Y FEKPS IQ
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQ 119
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 38.3 bits (85), Expect = 0.23
Identities = 14/39 (35%), Positives = 29/39 (74%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G+DVIA++ +GTGKT + + +L +I+ +++ Q ++L
Sbjct: 34 EGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVL 72
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 38.3 bits (85), Expect = 0.23
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
+G+D++ AQ+GTGKTA FSI ILQ++
Sbjct: 37 QGKDLLGCAQTGTGKTAAFSIPILQKL 63
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 38.3 bits (85), Expect = 0.23
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRD++ QAQ+GTGKTA F++ +++++ + +E A +L
Sbjct: 88 GRDLLGQAQTGTGKTAAFALPLIEKLADN-KELNAKVL 124
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 38.3 bits (85), Expect = 0.23
Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALIL 655
L +G D++A+AQ+GTGKTA+F++ I++++ + R +AL+L
Sbjct: 37 LVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVL 82
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 38.3 bits (85), Expect = 0.23
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 500 FCNPA-TRNNAL--ASKGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALIL 655
F NP + A+ A GRD++A AQ+GTGKT F I L+ + DT Q LIL
Sbjct: 47 FINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLIL 102
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 38.3 bits (85), Expect = 0.23
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A GRDVI AQ+GTGKTA F + ILQ++
Sbjct: 35 ALDGRDVIGIAQTGTGKTAAFVLPILQRL 63
>UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Magnetococcus sp. MC-1|Rep: DEAD/DEAH box helicase
domain protein - Magnetococcus sp. (strain MC-1)
Length = 572
Score = 38.3 bits (85), Expect = 0.23
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 637
LA G+DV QAQ+GTGKTA F I L + T R+
Sbjct: 34 LALAGKDVAGQAQTGTGKTAAFLIGALSHLVTHPRK 69
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 38.3 bits (85), Expect = 0.23
Identities = 15/37 (40%), Positives = 28/37 (75%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
R++IAQA +G+GKT F++ +L +ID +++ Q L++
Sbjct: 128 RNLIAQAHNGSGKTTCFTLGMLSRIDPAVKTPQGLMI 164
Score = 36.3 bits (80), Expect = 0.91
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 429 ETFDDMNLKEELLRGIYA-YGFEKPSAIQQRAI 524
+TF+D+ L ELLRG+Y FEKPS IQ +
Sbjct: 87 KTFEDLGLSAELLRGLYGEMKFEKPSKIQAETL 119
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 38.3 bits (85), Expect = 0.23
Identities = 18/42 (42%), Positives = 31/42 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A KG+D++A+A++G+GKT + I I+Q+I I +ALI+
Sbjct: 44 IALKGKDILAKARTGSGKTGAYLIPIVQRI-LHIASTRALII 84
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 38.3 bits (85), Expect = 0.23
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALIL 655
LA G+D++A A +G+GKTA F + +L+++ D+ R + LIL
Sbjct: 223 LALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLIL 267
Score = 33.9 bits (74), Expect = 4.8
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +3
Query: 417 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI-MPWHPRDAMLSLKP-SQELEKLL 590
++ + TF++++L LL+ + GF +P+ IQ +AI + + +D + S S + L
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFL 245
Query: 591 LSLYRFYNKSIQAFVNVKL*SWXPTRELA 677
L + + +++ PTRELA
Sbjct: 246 LPVLERLLFRDSEYRAIRVLILLPTRELA 274
>UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2;
Plasmodium chabaudi|Rep: DEAD-box RNA helicase, putative
- Plasmodium chabaudi
Length = 374
Score = 38.3 bits (85), Expect = 0.23
Identities = 16/42 (38%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+ R++IAQ+Q+G+GKT TF I++L +I+ ++ QA+ +
Sbjct: 258 ILDSNRNLIAQSQNGSGKTLTFVIAMLSKINRALYSLQAVCI 299
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 38.3 bits (85), Expect = 0.23
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALIL 655
A G D++AQA+SG GKTA F ++L+Q++ + CQA++L
Sbjct: 70 AMLGADILAQAKSGMGKTAVFVFALLEQVEKVPQGQKPYCQAVVL 114
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 38.3 bits (85), Expect = 0.23
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A G+D+I A++G+GKTA F+I ILQ++ + +LIL
Sbjct: 74 IALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLIL 115
>UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n=2;
Dugesia japonica|Rep: Nucleolar RNA helicase II/Gu
protein - Dugesia japonica (Planarian)
Length = 627
Score = 38.3 bits (85), Expect = 0.23
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTS 628
G+DVIAQA++GTGKT F++ +L +++ S
Sbjct: 81 GKDVIAQAKTGTGKTFAFALPVLTKLENS 109
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 38.3 bits (85), Expect = 0.23
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
+G+D I +AQ+GTGKTA F ISI+ Q+
Sbjct: 45 RGQDAIGRAQTGTGKTAAFLISIITQL 71
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 38.3 bits (85), Expect = 0.23
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
LA +GRDV+A+A++G+GKTA + + ILQ +
Sbjct: 76 LALEGRDVLAKAKTGSGKTAAYVLPILQAV 105
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ 643
+G D++ AQ+GTGKTA FS+ ILQ + R+ +
Sbjct: 40 EGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIE 74
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 37.9 bits (84), Expect = 0.30
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DV A+A++G+GKTA F I +L +I S QAL+L
Sbjct: 41 GADVRAKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVL 78
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 37.9 bits (84), Expect = 0.30
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
KG DV+ AQ+GTGKTA+F++ +LQ++
Sbjct: 327 KGHDVLGVAQTGTGKTASFTLPMLQKL 353
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 37.9 bits (84), Expect = 0.30
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G D+ A A++G+GKTA +I ++Q++D S+ Q L++
Sbjct: 38 GHDLCALAETGSGKTAACAIPLIQKVDPSLDAIQGLVI 75
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 37.9 bits (84), Expect = 0.30
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDT 625
KG+D++ AQ+G+GKTA+F + ILQ + T
Sbjct: 45 KGKDILGIAQTGSGKTASFVLPILQMLQT 73
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDT 625
G+DV+A AQ+GTGKTA F++ +L Q+ T
Sbjct: 38 GKDVMAGAQTGTGKTAAFALPLLHQLLT 65
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G + A +GTGKT F + +L +IDT+++ Q LIL
Sbjct: 30 GDSIFGLAPTGTGKTLAFVLPVLSRIDTNLKRTQVLIL 67
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
L +G D+IAQAQ+GTGKTA F + I+ +
Sbjct: 34 LVLEGHDMIAQAQTGTGKTAAFGLPIMSMM 63
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 37.9 bits (84), Expect = 0.30
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 637
A +GRDV+ AQ+GTGKTA ++ IL Q+ + R+
Sbjct: 36 ALEGRDVLGCAQTGTGKTAALALPILNQLGKNSRK 70
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQID 622
+G D+I AQ+GTGKTA F++ IL Q+D
Sbjct: 32 EGSDLIGCAQTGTGKTAAFALPILNQLD 59
>UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5;
Clostridium|Rep: DEAD/DEAH box helicase-like -
Clostridium cellulolyticum H10
Length = 437
Score = 37.9 bits (84), Expect = 0.30
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A K RDVI + +GTGKT + + + ++ +E QALIL
Sbjct: 37 ALKNRDVILHSSTGTGKTLAYLLPLFMKLSAEKKEMQALIL 77
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDT 625
A +GRDV+A A++G+GKTA F I +L ++ T
Sbjct: 500 ALEGRDVVAMARTGSGKTAAFLIPVLSKLRT 530
>UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1022
Score = 37.9 bits (84), Expect = 0.30
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +2
Query: 548 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
++IAQAQSGTGKTA F +++L +ID ++ Q + L
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICL 694
>UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase -
Plasmodium falciparum
Length = 576
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/42 (38%), Positives = 31/42 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+ S +++IAQ+Q+G+GKT TF I++L +I+ ++ QA+ +
Sbjct: 194 ILSSNKNLIAQSQNGSGKTLTFVIAMLCKINRTLSSLQAVCI 235
>UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2;
Onygenales|Rep: Putative uncharacterized protein -
Coccidioides immitis
Length = 722
Score = 37.9 bits (84), Expect = 0.30
Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQ 643
G+DV+AQA++GTGKT F + ++Q+I D S+R Q
Sbjct: 121 GKDVLAQAKTGTGKTLAFLVPVIQKIIRDDPSLRTGQ 157
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 37.9 bits (84), Expect = 0.30
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DV+ QA+SG GKTA F ++ LQQ++ + L++
Sbjct: 82 GMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVM 119
>UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05108.1 - Gibberella zeae PH-1
Length = 670
Score = 37.5 bits (83), Expect = 0.39
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A KG D++AQA++GTGKT F + +LQ++
Sbjct: 111 ALKGTDIVAQAKTGTGKTMAFLLPLLQRM 139
>UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1;
Mycoplasma penetrans|Rep: ATP-dependent RNA helicase -
Mycoplasma penetrans
Length = 457
Score = 37.5 bits (83), Expect = 0.39
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +2
Query: 515 TRNNALASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHK 667
T + + +K ++V+ +Q+GTGKT + + IL+ I+ +E QA+I+ K
Sbjct: 27 TESIPIINKDKNVVLVSQTGTGKTLCYLLPILENINLDSKELQAVIVVPTK 77
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 37.5 bits (83), Expect = 0.39
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A GRDV+ AQ+GTGKTA+F++ IL ++
Sbjct: 50 ALTGRDVVGIAQTGTGKTASFALPILHRL 78
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 37.5 bits (83), Expect = 0.39
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIR 634
+G+D++A AQ+GTGKTA F + I+Q + R
Sbjct: 43 EGKDLLAAAQTGTGKTAAFGLPIIQAVQQKKR 74
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 37.5 bits (83), Expect = 0.39
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
LA KG+D++ AQ+GTGKT F+I ++ ++ AL++
Sbjct: 35 LALKGKDILGSAQTGTGKTLAFAIPLIAKLLGEPNASTALVI 76
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 37.5 bits (83), Expect = 0.39
Identities = 14/39 (35%), Positives = 29/39 (74%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
KG++++ ++++G+GKTA+F+I + + I+ QALI+
Sbjct: 39 KGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQALIV 77
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 37.5 bits (83), Expect = 0.39
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALIL 655
A G+D++A AQ+GTGKT F + +Q + T R+ +ALIL
Sbjct: 36 ALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALIL 78
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 37.5 bits (83), Expect = 0.39
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
GRD++A AQ+GTGKTA F++ +L ++
Sbjct: 38 GRDLVASAQTGTGKTAAFALPVLARL 63
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 37.5 bits (83), Expect = 0.39
Identities = 14/32 (43%), Positives = 26/32 (81%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIR 634
+G+D++A A++GTGKTA F++ IL+++ + R
Sbjct: 37 QGKDILAGARTGTGKTAAFALPILEKLSSKER 68
>UniRef50_Q5KLJ5 Cluster: Translation initiation factor, putative;
n=2; Filobasidiella neoformans|Rep: Translation
initiation factor, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 932
Score = 37.5 bits (83), Expect = 0.39
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 294 SYSSERRSEDWPEDSKNGPSKDQ-GSYDG--PPGMDPGTLDTDWDQVVETFDDMNLKEEL 464
S+ S DWP S G + Q G DG PG G VV ++ +NLK +L
Sbjct: 301 SHGPSALSRDWP--SPGGQQQVQSGQKDGLTTPG---GAAVPGGGIVVSKWEHLNLKVDL 355
Query: 465 LRGIYAYGFEKPSAIQQRAI 524
LR I YG P+ IQ R +
Sbjct: 356 LRSISKYGIGPPNKIQTRVL 375
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 37.5 bits (83), Expect = 0.39
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A +GRD+IA+A++GTGKT F I I++++
Sbjct: 136 ALQGRDIIARAKTGTGKTLAFGIPIIKRL 164
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 37.5 bits (83), Expect = 0.39
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DV+ QA+SG GKTA F ++ LQQI+ + L++
Sbjct: 81 GMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVM 118
Score = 33.9 bits (74), Expect = 4.8
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 333 DSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVET-FDDMNLKEELLRGIYAYGFEKPSAI 509
D + P Q S PP D + + + + F D LK ELLR I GFE PS +
Sbjct: 14 DEEEEPQAPQESTPAPPKKD---IKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEV 70
Query: 510 QQRAI 524
Q I
Sbjct: 71 QHECI 75
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 37.1 bits (82), Expect = 0.52
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
+G+D++ AQ+G+GKTA FS+ ILQ+I
Sbjct: 123 EGQDILGIAQTGSGKTAAFSLPILQKI 149
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 37.1 bits (82), Expect = 0.52
Identities = 15/26 (57%), Positives = 23/26 (88%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
G+DV+A AQ+GTGKTA F++ +LQ++
Sbjct: 38 GKDVMAGAQTGTGKTAGFALPLLQRL 63
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 37.1 bits (82), Expect = 0.52
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALIL 655
A GRDV+ AQ+GTGKT F+ ILQ++ I R ++LIL
Sbjct: 35 ALAGRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPIRSLIL 78
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 530
TF ++ L + +L+ + G+EKPS IQ++AI P
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPP 34
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 37.1 bits (82), Expect = 0.52
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
LA +D++A++++GTGKT +F I ILQ I + +++IL
Sbjct: 48 LAINNKDILARSKNGTGKTLSFLIPILQNIYSESYGIESIIL 89
>UniRef50_Q9FQ91 Cluster: Putative chloroplast RNA helicase VDL'
isoform 4; n=11; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 4 - Nicotiana
tabacum (Common tobacco)
Length = 425
Score = 37.1 bits (82), Expect = 0.52
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAG 676
GRD + AQ+G+GKT + + +L ID+ QALI+ + G
Sbjct: 104 GRDCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELG 148
>UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL'
isoform 5; n=2; Nicotiana tabacum|Rep: Putative
chloroplast RNA helicase VDL' isoform 5 - Nicotiana
tabacum (Common tobacco)
Length = 390
Score = 37.1 bits (82), Expect = 0.52
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAG 676
GRD + AQ+G+GKT + + +L ID+ QALI+ + G
Sbjct: 104 GRDCVLHAQTGSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELG 148
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 36.7 bits (81), Expect = 0.69
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
+GRDVIA AQ+GTGKTA + + IL ++
Sbjct: 37 EGRDVIACAQTGTGKTAAYLLPILDRL 63
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 36.7 bits (81), Expect = 0.69
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
GRD+I Q+Q+G+GKT F + + ++ E Q LIL
Sbjct: 78 GRDLIVQSQTGSGKTGAFLLPLFDLVNPDKEEQQVLIL 115
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 36.7 bits (81), Expect = 0.69
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALIL 655
A GRDV+A A +G+GKTA F + IL Q ID +AL++
Sbjct: 35 AMSGRDVMASAVTGSGKTAAFLLPILHQLIDRPRGTTRALVI 76
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 36.7 bits (81), Expect = 0.69
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 405 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 530
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPP 90
Score = 35.5 bits (78), Expect = 1.6
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALIL 655
GRD++ QA +GTGKTA F++ +L ++ T QAL+L
Sbjct: 94 GRDLLGQAATGTGKTAAFALPLLHRLTDDRTGDHGPQALVL 134
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 36.7 bits (81), Expect = 0.69
Identities = 19/45 (42%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALIL 655
LA +G+D+I QA++GTGKT F++ I +++ S R+ +AL+L
Sbjct: 34 LALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVL 78
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 36.7 bits (81), Expect = 0.69
Identities = 13/30 (43%), Positives = 26/30 (86%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
L +G+DV+ +A++G+GKTAT+++ ++Q+I
Sbjct: 42 LLLEGKDVVVRARTGSGKTATYALPLIQKI 71
>UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Homo
sapiens|Rep: HLA-B associated transcript 1 - Homo
sapiens (Human)
Length = 197
Score = 36.7 bits (81), Expect = 0.69
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAGPNK 685
G DV+ QA+SG GKTA F ++ LQQ++ Q SH G N+
Sbjct: 82 GMDVLCQAKSGMGKTAVFVLATLQQLEPVTG--QVCFCDSHFPRGDNE 127
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 36.7 bits (81), Expect = 0.69
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
LA +GRD+I A++G+GKT F++ IL + + + AL+L
Sbjct: 46 LALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVL 87
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 36.7 bits (81), Expect = 0.69
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A + RDVI AQ+G+GKTA F+I ILQ +
Sbjct: 138 ALQARDVIGLAQTGSGKTAAFTIPILQAL 166
>UniRef50_Q93Y39 Cluster: DEAD-box ATP-dependent RNA helicase 13;
n=3; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 13 - Arabidopsis thaliana (Mouse-ear cress)
Length = 832
Score = 36.7 bits (81), Expect = 0.69
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +2
Query: 524 NALASKGRDVIAQAQSGTGKTATFSISILQQI 619
N A +G+DVI A++G+GKT F + ILQ++
Sbjct: 222 NVAAYQGKDVIGAAETGSGKTLAFGLPILQRL 253
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 36.7 bits (81), Expect = 0.69
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
LA +GRD+I A++G+GKT F++ IL + + + AL+L
Sbjct: 57 LALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVL 98
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 36.7 bits (81), Expect = 0.69
Identities = 13/32 (40%), Positives = 27/32 (84%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRE 637
G+D+IAQA++GTGKT +F+I +++++ +++
Sbjct: 223 GKDLIAQARTGTGKTFSFAIPLIEKLHGELQD 254
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 36.3 bits (80), Expect = 0.91
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDT 625
+A GRDV+A A++G+GKTA F I + +++ T
Sbjct: 71 IALDGRDVVAMARTGSGKTACFLIPMFEKLKT 102
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 36.3 bits (80), Expect = 0.91
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
LA +GRD++A A++G+GKTA F I + +++
Sbjct: 69 LALEGRDIVAMARTGSGKTACFLIPLFEKL 98
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 36.3 bits (80), Expect = 0.91
Identities = 14/42 (33%), Positives = 30/42 (71%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A + +D++ ++Q+G+GKTA+F I + + ++ + QAL+L
Sbjct: 37 VALQKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVL 78
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 36.3 bits (80), Expect = 0.91
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
+A +G D+I QA++GTGKT F I+IL +I
Sbjct: 86 IAVEGTDLIGQARTGTGKTLAFGITILLRI 115
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 36.3 bits (80), Expect = 0.91
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIR 634
L +GRD++ AQ+GTGKTA+F++ +L ++ + R
Sbjct: 40 LLLEGRDLLGLAQTGTGKTASFALPLLHRLAATPR 74
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 36.3 bits (80), Expect = 0.91
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
+A +GRD + QA++GTGKTA F + IL +
Sbjct: 5 VALQGRDCLIQAKTGTGKTAAFGLPILNSL 34
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 36.3 bits (80), Expect = 0.91
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
L GRD++ AQ+GTGKTA F++ IL ++
Sbjct: 98 LVMSGRDLLGIAQTGTGKTAAFALPILHRL 127
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 36.3 bits (80), Expect = 0.91
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
GRDV+A A +G+GKTA F++ +LQ++
Sbjct: 46 GRDVLAGANTGSGKTAAFAVPLLQRL 71
>UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase;
n=3; Cryptosporidium|Rep: Drs1p, eIF4a-1-family RNA SFII
helicase - Cryptosporidium parvum Iowa II
Length = 573
Score = 36.3 bits (80), Expect = 0.91
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
LA GRD++A+A++G+GKTA F + L+++
Sbjct: 63 LALSGRDIMAEAETGSGKTAAFLLPALERL 92
>UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 522
Score = 36.3 bits (80), Expect = 0.91
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +2
Query: 449 PQRRIVERHIRLWF*KTFCNPATRNNALASKGRDVIAQAQSGTGKTATFSISIL 610
P++R+ + +LW T AL +G+D++A+A++G+GKTA + I IL
Sbjct: 17 PEKRVYDAAKKLWDRPTPIQQTAIPPAL--QGKDILAKARTGSGKTAAYIIPIL 68
>UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3;
Eutheria|Rep: Nucleolar protein GU2 variant - Homo
sapiens (Human)
Length = 363
Score = 36.3 bits (80), Expect = 0.91
Identities = 13/27 (48%), Positives = 25/27 (92%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
+G+D+IAQA++GTGKT +F+I +++++
Sbjct: 173 EGKDLIAQARTGTGKTFSFAIPLIERL 199
>UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent RNA
helicase deaD; n=1; Sulfolobus tokodaii|Rep: 337aa long
hypothetical ATP-dependent RNA helicase deaD -
Sulfolobus tokodaii
Length = 337
Score = 36.3 bits (80), Expect = 0.91
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +2
Query: 464 VERHIRLWF*KTFCNPATRNNALASKGRDVIAQAQSGTGKTATFSISILQ 613
+E+ IR K F ++ L +G++V+ +A++G+GKTA ++I IL+
Sbjct: 5 IEQAIREMGFKNFTEVQSKTIPLMLQGKNVVVRAKTGSGKTAAYAIPILE 54
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 36.3 bits (80), Expect = 0.91
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
A +G D++ QAQ+GTGKT F I +++++ + Q+LIL
Sbjct: 36 ALQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLIL 75
>UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 36.3 bits (80), Expect = 0.91
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL-ILXSHKRAGPNK 685
+D+IAQA +G+GKT F + +L ++D + + QA+ I + + A NK
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNK 188
>UniRef50_A2XVF7 Cluster: DEAD-box ATP-dependent RNA helicase 13;
n=2; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 13 - Oryza sativa subsp. indica (Rice)
Length = 832
Score = 36.3 bits (80), Expect = 0.91
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 527 ALASKGRDVIAQAQSGTGKTATFSISILQQI 619
A A +G+DVI A++G+GKT F + ILQ++
Sbjct: 231 AAAHQGKDVIGAAETGSGKTLAFGLPILQRL 261
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 36.3 bits (80), Expect = 0.91
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A +G+DVI AQ+G+GKT F+I ILQ +
Sbjct: 43 ALEGKDVIGLAQTGSGKTGAFAIPILQAL 71
Score = 33.1 bits (72), Expect = 8.5
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +3
Query: 417 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
++VV+TF ++ ++EEL++ G++ PS IQ A+
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEAL 40
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G D+I +++SGTGKT FS L+ ++T+ Q LIL
Sbjct: 61 GFDLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLIL 98
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G+DV A A +G+GKT + + +L+++ TS E QAL+L
Sbjct: 59 GKDVFALANTGSGKTLAYGLPLLERLKTS-PEQQALVL 95
>UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=1;
Mycoplasma mobile|Rep: DEAD-box ATP-dependent RNA
helicase - Mycoplasma mobile
Length = 557
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A+K ++++ AQ+GTGKTA F +SI+ +I
Sbjct: 35 ANKNQNILGCAQTGTGKTAAFGVSIINKI 63
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 35.9 bits (79), Expect = 1.2
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALIL 655
+G D++ AQ+GTGKTA F + IL +I + R C+AL+L
Sbjct: 93 EGHDLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACRALVL 136
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATF---SISILQQIDTSI--RECQALIL 655
+GRD++ AQ+GTGKTA F SI L++ D I + C+ L+L
Sbjct: 38 EGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVL 81
>UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1;
Erythrobacter sp. NAP1|Rep: Cold-shock dead-box protein
A - Erythrobacter sp. NAP1
Length = 598
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 536 SKGRDVIAQAQSGTGKTATFSISILQQI 619
S GRD+I AQ+G+GKT F I++ Q I
Sbjct: 34 SAGRDLIVSAQTGSGKTVAFGIALAQDI 61
>UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 394
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Frame = +2
Query: 533 ASKGR-DVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALIL 655
A+KGR D+I AQ+G+GKT F++ ILQ+ + I +ALI+
Sbjct: 51 ATKGRCDIIGAAQTGSGKTLAFALPILQRLLSQGIDVLRALIV 93
>UniRef50_Q4Q0X4 Cluster: ATP-dependent RNA helicase-like protein;
n=3; Leishmania|Rep: ATP-dependent RNA helicase-like
protein - Leishmania major
Length = 964
Score = 35.9 bits (79), Expect = 1.2
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 527 ALASKGRDVIAQAQSGTGKTATFSISILQQIDTSI 631
A S G DV+ A++G+GKT F++ ILQ + T++
Sbjct: 254 AADSAGHDVVVSAETGSGKTLVFALPILQDLLTTL 288
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 35.9 bits (79), Expect = 1.2
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+G D++ A++GTGKT F+I ILQ++ ALIL
Sbjct: 125 EGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALIL 163
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,487,772
Number of Sequences: 1657284
Number of extensions: 13912319
Number of successful extensions: 36381
Number of sequences better than 10.0: 413
Number of HSP's better than 10.0 without gapping: 35005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36368
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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