Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_F13
         (808 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    31   0.008
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    29   0.058
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.23 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.94 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   2.9  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   5.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   8.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   8.7  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 31.5 bits (68), Expect = 0.008
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +2

Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
           GRD+++ AQ+G+GKTA F + I+  +
Sbjct: 195 GRDLMSCAQTGSGKTAAFMLPIIHNL 220



 Score = 28.7 bits (61), Expect = 0.058
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 426 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
           + +F+   L+  LL  +   G+ KP+AIQ+ AI
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAI 189


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 28.7 bits (61), Expect = 0.058
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +3

Query: 252 LASSFPFSYCG*NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPP 383
           L+SS PFS  G  +S S  +R++DW   S +G         GPP
Sbjct: 82  LSSSGPFSSIGGGISASKRQRTDDW-LSSPSGNVPPLTPSPGPP 124


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
 Frame = +3

Query: 276  YCG*NMSYSSERRSEDWP-----EDSKNGPSKDQGSYDGP--PGMDPGTLDTDWDQVVET 434
            YC   + ++ ER+  DWP     E+ K G      S+  P  P   P +    W     T
Sbjct: 1130 YCAGGLHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTT 1189


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -3

Query: 353 RWPIFGILWPIF*PSFRRIRHVSTAVAERKRTSKVKLS*AGAFYINFTEHCLS 195
           RWP+F   W         ++H  +     K   K++ S  G  ++   EHC S
Sbjct: 115 RWPLFLNEWTKI--EINLLKHYQSTTDLHK---KIRYSAFGMIFVALLEHCFS 162


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 745 MQAWPFSIQVITKELSPPSE 686
           +Q +P S+Q + +  +PPS+
Sbjct: 21  VQGYPASVQPLPRHFNPPSD 40


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/67 (20%), Positives = 31/67 (46%)
 Frame = -3

Query: 548 RVPWMPRHYCALLDCRRFFKTIGVYASQQFFFEVHVIEGFDNLIPVGVKCPRVHSRRSIV 369
           + P  P ++  +LD  +     G     + FF+ ++I G +N + + V    + +  + +
Sbjct: 17  KAPQPPENWTGVLDATKE----GDPCYGRHFFKKNLIVGSENCLVLNVYTKNLRTDTNRI 72

Query: 368 TTLILRW 348
           T  +L W
Sbjct: 73  TQPVLFW 79


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 542 PWMPRHYCALLDC 504
           PW PRH   L +C
Sbjct: 194 PWFPRHASDLDNC 206


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 387 FPEVHRNYLDPSMAHFW 337
           F +V R+Y DP   ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 506 NPATRNNALASKGRDVIAQAQSGTGKT 586
           NPA+R++ L S    +++     TG+T
Sbjct: 232 NPASRSSCLGSNTSSMLSLNCLNTGRT 258


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
 Frame = -2

Query: 546 RPLDAKALLRVAGLQKVFQNHRRICL-STILL*GSCHRRF 430
           RP   +   R  G + V QNH R            CH+RF
Sbjct: 133 RPFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRF 172


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 506 NPATRNNALASKGRDVIAQAQSGTGKT 586
           NPA+R++ L S    +++     TG+T
Sbjct: 21  NPASRSSCLGSNTSSMLSLNCLNTGRT 47


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 506 NPATRNNALASKGRDVIAQAQSGTGKT 586
           NPA+R++ L S    +++     TG+T
Sbjct: 21  NPASRSSCLGSNTSSMLSLNCLNTGRT 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,851
Number of Sequences: 336
Number of extensions: 3529
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)