Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_F13
(808 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 72 6e-13
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 72 6e-13
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 71 8e-13
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 71 1e-12
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 44 2e-04
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 44 2e-04
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 42 8e-04
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 42 8e-04
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 42 8e-04
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 36 0.029
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 36 0.029
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 36 0.029
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 36 0.038
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 36 0.038
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 35 0.088
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 35 0.088
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 35 0.088
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 35 0.088
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 34 0.12
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 33 0.27
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 33 0.35
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 32 0.47
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 32 0.47
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 32 0.47
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 32 0.62
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 32 0.62
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 32 0.62
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 31 0.82
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 31 1.4
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 31 1.4
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 31 1.4
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 30 1.9
03_05_0865 - 28365430-28367640 30 2.5
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 30 2.5
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 30 2.5
08_02_0230 - 14572854-14574632 29 4.4
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 29 5.8
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 29 5.8
02_02_0619 - 12205718-12205845,12205941-12206142,12207240-122073... 29 5.8
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 28 7.6
03_05_0172 - 21488504-21488752,21488862-21489611,21489691-214897... 28 7.6
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 28 7.6
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 71.7 bits (168), Expect = 6e-13
Identities = 48/117 (41%), Positives = 63/117 (53%)
Frame = +3
Query: 408 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPWHPRDAMLSLKPSQELEKL 587
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I+P+ + + + K
Sbjct: 34 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPF-CKGLDVIQQAQSGTGKT 92
Query: 588 LLSLYRFYNKSIQAFVNVKL*SWXPTRELAPTNSEGGDSSLVIT*MLNGHACIGGTN 758
+ A V + PTRELA E +L + HAC+GGT+
Sbjct: 93 ATFCSGILQQLDYAVVECQALVLAPTRELA-QQIEKVMRALGDYLGVKVHACVGGTS 148
Score = 61.3 bits (142), Expect = 9e-10
Identities = 34/64 (53%), Positives = 42/64 (65%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAGPNKFRRW**LLGDH 718
KG DVI QAQSGTGKTATF ILQQ+D ++ ECQAL+L + R + + LGD+
Sbjct: 77 KGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVL-APTRELAQQIEKVMRALGDY 135
Query: 719 LNAK 730
L K
Sbjct: 136 LGVK 139
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 71.7 bits (168), Expect = 6e-13
Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Frame = +3
Query: 375 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP-WHPR 542
GP MD L + +V+ +FD M ++E+LLRGIYAYGFEKPSAIQQRA++P R
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGR 69
Query: 543 DAMLSLKP-SQELEKLLLSLYRFYNKSIQAFVNVKL*SWXPTRELAPTNSEGGDSSLVIT 719
D + + + + + LS+ + + +++ V+ PTRELA +E ++
Sbjct: 70 DVIAQAQSGTGKTSMISLSVCQIVDTAVR---EVQALILSPTRELA-AQTERVMLAIGDY 125
Query: 720 *MLNGHACIGG 752
+ HACIGG
Sbjct: 126 INIQVHACIGG 136
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 71.3 bits (167), Expect = 8e-13
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 408 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPW 533
T +D+V E+FDDM L+E LLRGIYAYGFEKPSAIQQR I+P+
Sbjct: 34 TSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPF 75
Score = 59.3 bits (137), Expect = 4e-09
Identities = 33/64 (51%), Positives = 41/64 (64%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAGPNKFRRW**LLGDH 718
KG DVI QAQSGTGKTATF ILQQ+D + ECQ+L+L + R + + LGD+
Sbjct: 77 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVL-APTRELAQQIEKVMRALGDY 135
Query: 719 LNAK 730
L K
Sbjct: 136 LGVK 139
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 70.9 bits (166), Expect = 1e-12
Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Frame = +3
Query: 375 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP-WHPR 542
GP MD L + +V+ +FD M ++++LLRGIYAYGFEKPSAIQQRA++P R
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGR 69
Query: 543 DAMLSLKP-SQELEKLLLSLYRFYNKSIQAFVNVKL*SWXPTRELAPTNSEGGDSSLVIT 719
D + + + + + LS+ + + +++ V+ PTRELA L I
Sbjct: 70 DVIAQAQSGTGKTSMISLSVCQIVDTAVR---EVQALILSPTRELAAQTER---VMLAIG 123
Query: 720 *MLN--GHACIGG 752
+N HACIGG
Sbjct: 124 DFINIQVHACIGG 136
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DVI QA+SG GKTA F +S LQQID + AL+L
Sbjct: 73 GMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVL 110
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G DVI QA+SG GKTA F +S LQQID + AL+L
Sbjct: 60 GMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVL 97
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 41.5 bits (93), Expect = 8e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A G D++A+A++GTGKTA F I L++ID Q +IL
Sbjct: 180 IALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVIL 221
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
F+D LK ELL GIY GFE+PS IQ+ +I
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESI 178
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 41.5 bits (93), Expect = 8e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A G D++A+A++GTGKTA F I L++ID Q +IL
Sbjct: 157 IALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVIL 198
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
F+D LK ELL GIY GFE+PS IQ+ +I
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESI 155
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 41.5 bits (93), Expect = 8e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
+A G D++A+A++GTGKTA F I L++ID Q +IL
Sbjct: 167 IALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVIL 208
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 435 FDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
F+D LK ELL GIY GFE+PS IQ+ +I
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESI 165
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 36.3 bits (80), Expect = 0.029
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +2
Query: 527 ALASKGRDVIAQAQSGTGKTATFSISILQQI 619
A A +G+DVI A++G+GKT F + ILQ++
Sbjct: 175 AAAHQGKDVIGAAETGSGKTLAFGLPILQRL 205
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 36.3 bits (80), Expect = 0.029
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A GRD+IA+A++GTGKT F I +++Q+
Sbjct: 164 ALDGRDLIARAKTGTGKTLAFGIPMIKQL 192
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 36.3 bits (80), Expect = 0.029
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQAL-ILXSHKRAGPNK 685
+D+IAQA +G+GKT F + +L ++D + + QA+ I + + A NK
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNK 188
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = +3
Query: 339 KNGPSKDQGSYDGPPGMDPGTLD-----TDWDQVVET---FDDMNLKEELLRGIY-AYGF 491
++G S G GPP +D T V E+ F+D+ L ELL+G++ GF
Sbjct: 62 EHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGF 121
Query: 492 EKPSAIQ 512
+PS IQ
Sbjct: 122 SRPSKIQ 128
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 35.9 bits (79), Expect = 0.038
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A +GRDVI Q+G+GKTA F++ I+Q +
Sbjct: 17 ALQGRDVIGVGQTGSGKTAAFALPIIQAL 45
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILXSHKRAG 676
G+D I AQ+G+GKT + +S+ ID QAL++ + G
Sbjct: 78 GQDCILHAQTGSGKTLAYLLSVFSAIDFGRSSVQALVVVPTRELG 122
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
LA GRD+ A +G+GKTA FS+ +L+++
Sbjct: 227 LALTGRDICGSAITGSGKTAAFSLPVLERL 256
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
+F ++NL LLR A G++KP+ IQ I
Sbjct: 195 SFLELNLSRPLLRACEALGYQKPTPIQAACI 225
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A +GRDV+ A++G+GKTA F++ IL ++
Sbjct: 111 ALEGRDVLGIAETGSGKTAAFALPILHRL 139
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A +G+D+I +A++GTGKT F I I+ +I
Sbjct: 127 AMQGKDMIGRARTGTGKTLAFGIPIMDRI 155
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALIL 655
G D+I Q+ GT T T ILQ++D + ECQAL+L
Sbjct: 698 GLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVL 733
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A +G+D++ +A++GTGKT F I IL I
Sbjct: 132 AMQGKDMVGRAKTGTGKTLAFGIPILDAI 160
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 33.1 bits (72), Expect = 0.27
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 533 ASKGRDVIAQAQSGTGKTATFSISILQQI 619
A +GRD+I Q+G+GKT F++ I+Q +
Sbjct: 75 ALEGRDLIGLGQTGSGKTGAFALPIIQAL 103
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTS 628
GRD++A AQ+G+GKTA F I+ I +S
Sbjct: 274 GRDLMACAQTGSGKTAAFCFPIISGIMSS 302
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 32.3 bits (70), Expect = 0.47
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISIL 610
+A GRD++A AQ+G+GKTA F + ++
Sbjct: 117 IALAGRDLMACAQTGSGKTAAFCLPVV 143
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 32.3 bits (70), Expect = 0.47
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQIDT 625
+G DV+A+A++GTGKT F + ++ + T
Sbjct: 110 QGEDVLAKAKTGTGKTVAFLLPAIELLST 138
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE 637
+G+DV+A+A++GTGKT F +I +L + S R+
Sbjct: 42 QGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRD 77
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
GRD++A AQ+G+GKTA F I+ I
Sbjct: 192 GRDLMACAQTGSGKTAAFCFPIISGI 217
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
GRD++A AQ+G+GKTA F I+ I
Sbjct: 360 GRDLMACAQTGSGKTAAFCFPIISGI 385
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 31.9 bits (69), Expect = 0.62
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 500 FCNPATRNNALASKGRDVIAQAQSGTGKTATFSISILQQI 619
F +P +L G+DV+A+A++GTGKT F + ++ +
Sbjct: 478 FSSPYHVLTSLIYIGKDVLAKAKTGTGKTVAFLLPAIEVV 517
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 31.5 bits (68), Expect = 0.82
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
G D+ A A++G+GKTA F + ++Q++
Sbjct: 63 GHDIAAMARTGSGKTAAFLVPMIQRL 88
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDT 625
GRDV+ A++G+GKT F I +L T
Sbjct: 117 GRDVLGAAKTGSGKTLAFVIPVLMSAAT 144
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
L +G+DV+A+A++G+GKT + + +L ++
Sbjct: 116 LILEGKDVVAKAKTGSGKTFAYLLPMLHEL 145
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 30.7 bits (66), Expect = 1.4
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +2
Query: 539 KGRDVIAQAQSGTGKTATFSISILQQI 619
+G+DV+ +A++GTGK+A F + ++ +
Sbjct: 378 EGKDVLVKAKTGTGKSAAFLLPAIESV 404
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQIDTSIR 634
+A KGRD+I AQ+G+GKT ++ + L + R
Sbjct: 189 MALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPR 223
>03_05_0865 - 28365430-28367640
Length = 736
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
L + RDVI A++G+GKTA F + +L I
Sbjct: 348 LGLQQRDVIGIAETGSGKTAAFVLPMLSYI 377
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQI 619
GRD+I A++G+GKTA F + ++ I
Sbjct: 256 GRDIIGIAKTGSGKTAAFVLPMIVHI 281
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 411 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI 524
D + +++F D +L+ I G+EKP+ IQ +A+
Sbjct: 213 DVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQAL 250
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 327 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 422
P ++ GPS+DQ + + PP + PG D W Q
Sbjct: 392 PAVTETGPSRDQPAEE-PPAVTPGANDGFWQQ 422
>08_02_0230 - 14572854-14574632
Length = 592
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 292 CLIRLKEGQKIGQRIPKMGHRRIKVVTMDLREWTLGHLTPTGIKLSKPSMT*TSKKNC 465
C +RL + QK+ P++ R++ VT R G + I L P++T + NC
Sbjct: 219 CTVRLCDLQKVILAAPRLAELRLESVTFSDRPPLSGFIFDEHIHLHCPAVTSFTMVNC 276
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 530 LASKGRDVIAQAQSGTGKTATFSISILQQI 619
L G D++ +A++G GKT F + IL+ +
Sbjct: 137 LVLDGHDLVGRARTGQGKTLAFVLPILESL 166
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 432 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMP 530
+F ++ +E+L + ++GF +PS IQ A P
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRP 273
>02_02_0619 -
12205718-12205845,12205941-12206142,12207240-12207315,
12208073-12208278
Length = 203
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 527 HYCALLDCRRFFKTIGVYASQQFFFEVHVIEG 432
++C +L C+R + G +++QQ FF +I G
Sbjct: 118 YHCNILGCKRLNDSTGEHSTQQRFFVELIING 149
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 542 GRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALIL 655
GR+ A A +G+GKT F IL +I +E +A+IL
Sbjct: 183 GRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVIL 221
>03_05_0172 -
21488504-21488752,21488862-21489611,21489691-21489789,
21489862-21490776,21490847-21490976,21491438-21491583,
21491801-21491896,21492521-21492613,21492702-21492755,
21492897-21492956,21493046-21493171,21493283-21493366,
21493444-21493587,21493667-21493963
Length = 1080
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 524 NALASKGRDVIAQAQSGTGKTATFSISILQQIDTS 628
+ALA ++ QSGTGKT T ++ +D+S
Sbjct: 161 SALAGFNSSLVCYGQSGTGKTYTMFGALAAMVDSS 195
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 545 RDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALIL 655
RD+ + +G+GKT +++ I+Q + T +R +AL++
Sbjct: 75 RDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVV 112
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,691,960
Number of Sequences: 37544
Number of extensions: 380614
Number of successful extensions: 1014
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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