Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_F12
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.6  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 90  TGNANVKPRKXSKNSNLKEFPSSEVG 13
           T N+  KP    K +N K  PS+E+G
Sbjct: 438 TENSPTKPYYKLKTANNKRPPSTELG 463


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 578 SSQSFRIXFKXXTXXXFKSTLFRSI 504
           S +SF+  +K      FK+ L+RSI
Sbjct: 381 SGESFKSPYKASCWAQFKAVLWRSI 405


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 578 SSQSFRIXFKXXTXXXFKSTLFRSI 504
           S +SF+  +K      FK+ L+RSI
Sbjct: 381 SGESFKSPYKASCWAQFKAVLWRSI 405


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 568 DWDEVCDGCLQXT 606
           DW E  +GC+Q T
Sbjct: 961 DWPENVEGCMQHT 973


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 274 HLIAWRQTSLQFSHTLRNHLLEVIGPPAQP*P 179
           HL  +++ +LQ    +R H++  +    QP P
Sbjct: 161 HLHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 274 HLIAWRQTSLQFSHTLRNHLLEVIGPPAQP*P 179
           HL  +++ +LQ    +R H++  +    QP P
Sbjct: 161 HLHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -2

Query: 274 HLIAWRQTSLQFSHTLRNHLLEVIGPPAQP*P 179
           HL  +++ +LQ    +R H++  +    QP P
Sbjct: 161 HLHRYKEEALQGDGRMRQHVMHNLSSVPQPQP 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,953
Number of Sequences: 336
Number of extensions: 2364
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)