Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_F12
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002...    31   0.93 
08_01_0411 + 3670758-3672365                                           30   2.8  
08_02_1581 - 28004060-28004449,28004730-28004888,28004933-280050...    29   5.0  
08_02_0459 + 17420156-17420976,17422291-17424199                       29   5.0  

>04_04_1466 - 33799104-33799229,33799659-33799669,33800052-33800200,
            33800261-33800299,33800690-33800746,33800839-33801628,
            33801705-33801980,33802051-33802117,33802211-33802285,
            33802618-33802812,33802927-33803076,33803152-33803522,
            33804070-33804193,33804246-33804275,33804306-33804417,
            33804919-33804985,33805138-33805180,33805768-33805872
          Length = 928

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +1

Query: 28   REFLKI*VFXXLTWFYISIPSFIFEVSKFITHEFXYSSKMFKFSLFHLLFLATAVQVVLS 207
            R+ LK   F  L W+ +S  +    +S   T+ F Y S + +F   H+  + TA   ++ 
Sbjct: 821  RQCLKDTAFAYLLWYLLSEETSGSYISYPFTYPFSYVSSLDEFRGLHIASILTAGIRLIH 880

Query: 208  LREG 219
            LR+G
Sbjct: 881  LRKG 884


>08_01_0411 + 3670758-3672365
          Length = 535

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +1

Query: 355 CYYLGGLEESATGILGELSKPLSWSMPXDXICEKLKKKDAQXCDLRF 495
           CY   G    A  +   + KP  W MP +     +    +Q  DLRF
Sbjct: 261 CYAKNGCAREALAVFNRMLKPHVWVMPNEKTFSSVISACSQLGDLRF 307


>08_02_1581 -
           28004060-28004449,28004730-28004888,28004933-28005044,
           28005160-28005236,28005525-28006076
          Length = 429

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 25/93 (26%), Positives = 41/93 (44%)
 Frame = +1

Query: 142 KMFKFSLFHLLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKF 321
           K+      H+  LA  VQ+  S   G  E+  K  ++F + +S  +KK+ + I +  K  
Sbjct: 52  KILASQAHHIHELAKEVQINFS---GYMEMQRKEEKRFGSMISS-LKKENQDIRSMLKIA 107

Query: 322 CXGSKNXENRFCYYLGGLEESATGILGELSKPL 420
               +  ENR C   G  ++  + IL    K L
Sbjct: 108 VTEKEAAENRLCVLKGDKDQGRSAILQIAEKGL 140


>08_02_0459 + 17420156-17420976,17422291-17424199
          Length = 909

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 424 NLRALTILPKCRWLTLRDLLNSNKIYFLXSLNLXRT 317
           +LR L+    CRWL  + L N  K++ L  LNL +T
Sbjct: 571 HLRVLSF-QGCRWLQSQHLANIGKLFQLRFLNLRKT 605


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,577,217
Number of Sequences: 37544
Number of extensions: 255487
Number of successful extensions: 601
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)