Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_F12
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical...   149   3e-36
U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like pr...    31   0.83 
Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical pr...    29   5.8  
AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical...    29   5.8  

>AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical
           protein Y54G2A.23 protein.
          Length = 168

 Score =  149 bits (360), Expect = 3e-36
 Identities = 69/158 (43%), Positives = 96/158 (60%), Gaps = 1/158 (0%)
 Frame = +1

Query: 169 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCXGSKNXEN 348
           L+ L + V VV S     CEVC K ++   A +    K  P  I    ++ C  ++N EN
Sbjct: 4   LVLLISLVIVVASAAAPQCEVCKKVLDDVMAKVPAGDKSKPDAIGKVIREHCETTRNKEN 63

Query: 349 RFCYYLGGLEESATGILGELSKPLSWSMPXDXIC-EKLKKKDAQXCDLRFXXXIDLNNVD 525
           +FC+Y+G L ESAT I+ E++KPLSWSMP + +C EKLK KDAQ C+L++   +D   +D
Sbjct: 64  KFCFYIGALPESATSIMNEVTKPLSWSMPTEKVCLEKLKGKDAQICELKYDKPLDWKTID 123

Query: 526 LKXLXVXXLKXILNDWDEVCDGCLQXTDFIKRLEXXXP 639
           LK + V  LK IL +W EVC GC +  + IKR+E   P
Sbjct: 124 LKKMRVKELKNILGEWGEVCKGCTEKAELIKRIEELKP 161


>U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like
           protein family protein4 protein.
          Length = 103

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 169 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKK 318
           L+F+ATAV +        C++C   V+K+  ++  DV    K  + E KK
Sbjct: 10  LVFVATAVVLPHQRNSLGCQMCELAVKKYDGSVDKDVNGIKKDFDTECKK 59


>Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical
           protein F44F4.4 protein.
          Length = 890

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
 Frame = +1

Query: 178 LATAVQVVLSLREGDC--EVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCXGSKNXENR 351
           + TA+ +  S+  G    E  +K V K +  +S + K +   +E  F +FC G       
Sbjct: 84  ITTAILIRSSITNGSLLEEQRLKEVVKVSDFISTNFKLNVSGVEKNFNQFCRGFCQANEP 143

Query: 352 FCYYLGGLEESATGILGELSKPLSWSMP 435
              Y  GL+         +SK +  S P
Sbjct: 144 VRQYYNGLQILGKNQTDGISKRIDLSYP 171


>AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical
           protein C36C5.12 protein.
          Length = 219

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 229 VCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCXGSKN 339
           +C++ +  FAA + D++  D K    EFKK C   KN
Sbjct: 59  LCIERLRDFAAKV-DELDMDKKSELKEFKKTCDSLKN 94


>Z78061-3|CAB60286.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 190 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCXGSKN 339
           V+ +  ++EGD      T+ +F A   D  + DP  +    ++F  G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299


>AL117200-16|CAB60587.1|  662|Caenorhabditis elegans Hypothetical
           protein C48G7.3 protein.
          Length = 662

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 190 VQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDPKKIEAEFKKFCXGSKN 339
           V+ +  ++EGD      T+ +F A   D  + DP  +    ++F  G KN
Sbjct: 250 VEELAQVKEGDNACFGLTLRQFVACTKDTKETDPAVVIRNVRQFINGMKN 299


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,930,620
Number of Sequences: 27780
Number of extensions: 224607
Number of successful extensions: 611
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)