Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_F11
(881 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 253 5e-66
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 222 8e-57
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 146 5e-34
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 145 2e-33
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 137 3e-31
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 110 4e-23
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 89 1e-16
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 85 2e-15
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 85 2e-15
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 74 4e-12
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 62 2e-08
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 62 2e-08
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 57 7e-07
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 57 7e-07
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 56 1e-06
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 54 4e-06
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 54 4e-06
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 53 8e-06
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 52 2e-05
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 52 2e-05
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 50 1e-04
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 48 4e-04
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 46 0.001
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 44 0.004
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 44 0.005
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 43 0.009
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 42 0.016
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 42 0.021
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 42 0.021
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 40 0.063
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.11
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 40 0.11
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 39 0.15
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 39 0.19
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 38 0.26
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 38 0.26
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 37 0.78
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 36 1.8
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 33 9.6
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 253 bits (619), Expect = 5e-66
Identities = 120/143 (83%), Positives = 128/143 (89%)
Frame = +2
Query: 86 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLXKVGVXAK 265
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVL KVGV AK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 266 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGRKGHAVGDIPGVRF 445
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN I NDE LVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 446 KVVKVANVSLLALYKEKKERPXS 514
KVVKVANVSLLALYK KKERP S
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 222 bits (543), Expect = 8e-57
Identities = 103/142 (72%), Positives = 120/142 (84%)
Frame = +2
Query: 89 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLXKVGVXAKQ 268
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVL K+G+ +KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 269 PNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGRKGHAVGDIPGVRFK 448
PNSAIRKCVRVQLIKNGKKVTAFVP DGCLN + NDE L+AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 449 VVKVANVSLLALYKEKKERPXS 514
VVKV+ VSLLAL+KEKKE+P S
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 146 bits (355), Expect = 5e-34
Identities = 72/139 (51%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
Frame = +2
Query: 95 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLXKVGVXAKQPN 274
P G+ K R++ RW D +K+ +G K +P GA A+GIVL KVGV A++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 275 SAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGF-GRKGHAVGDIPGVRFKV 451
+A+RKCVRVQL+KNGK VTAFVP DG LN+I +DE ++ G +G ++GDIPGVRFKV
Sbjct: 67 AAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKV 126
Query: 452 VKVANVSLLALYKEKKERP 508
+KV VSL A+++ KK++P
Sbjct: 127 IKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 145 bits (351), Expect = 2e-33
Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Frame = +2
Query: 116 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCV 295
RK V+ R+ RW+D+++ + + KA+P GA AKGIVL KVGV AKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 296 RVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGF-GRKGHAVGDIPGVRFKVVKVANVS 472
R+QLIKNG+++TAF P DG +N I +DE + G GR G + GDIPGVRF+V KV +VS
Sbjct: 69 RIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVS 128
Query: 473 LLALYKEKKERP 508
L + K+++P
Sbjct: 129 LEEMVAGKRDKP 140
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 137 bits (332), Expect = 3e-31
Identities = 62/95 (65%), Positives = 71/95 (74%)
Frame = +2
Query: 92 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLXKVGVXAKQP 271
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVL K+G+ AKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 272 NSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXN 376
NSAI KC RVQL+KNGKK+ AFVP DGCLN I N
Sbjct: 133 NSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKEN 167
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 110 bits (265), Expect = 4e-23
Identities = 54/100 (54%), Positives = 64/100 (64%)
Frame = -3
Query: 522 YTYDXGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSXSSFXXMWFRQPSR 343
Y YD G SFFS +A ++T T TTL TPG+SP A PL P PA SSF F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 342 GTNAVTFFPFLMSCTRTHLRMAELGCLAXTPTXSRTMPFA 223
GT AVTF PFL++ T TH +AE GCL P S+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 89.0 bits (211), Expect = 1e-16
Identities = 48/134 (35%), Positives = 76/134 (56%)
Frame = -2
Query: 487 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*XFVVXXDVV*ATVTGDECGHFLSVLN 308
++S++R++GYF HLK +S ++T +TF+T+S + ++ + V A + G E L VLN
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVLN 67
Query: 307 ELYTDAFADGRVGLLSXYTNFXEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVV 128
EL+ DA DGR+ L F + ++LC+R +R+ L VGFL FV P L +V
Sbjct: 68 ELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLLVPSVT 127
Query: 127 HVLTRRSYSSGFTH 86
L S ++ H
Sbjct: 128 AELPGSSETTTLAH 141
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 85.4 bits (202), Expect = 2e-15
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +2
Query: 377 DEXLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPXS 514
DE L+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+P S
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/74 (59%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 CVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGF-GRKGHAVGDIPGVRFKVVKVAN 466
CVRVQL KNGK VTAFVP DG LN I +DE ++ G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 467 VSLLALYKEKKERP 508
VSL A+ KK++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 69.7 bits (163), Expect = 9e-11
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = +2
Query: 95 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLXKVGVXAKQPN 274
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVL KVGV A++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 275 SAIRKCVRVQLIKN 316
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 74.1 bits (174), Expect = 4e-12
Identities = 42/115 (36%), Positives = 61/115 (53%)
Frame = -2
Query: 415 VTFTTESRH*XFVVXXDVV*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSXYTNFXED 236
+TF+T+S + F++ + V A + G E L VLNEL+ DA DGR+ L F +
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 235 DALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVVHVLTRRSYSSGFTHLDSTT 71
++LC+R T +R+ L VGFL FV P L +V L S ++ HL T
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLAHLAGAT 115
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 62.1 bits (144), Expect = 2e-08
Identities = 44/137 (32%), Positives = 71/137 (51%)
Frame = -2
Query: 541 QVTYHNVHL*XWSLLFLFVESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*XFVVXXDV 362
Q++Y L W + F+ + R+ G F L+ ++ +++D V+ ++E FVV
Sbjct: 3 QISYQQSALLDWLVFFVSPKCVNRNSGNFDDLEPDTRHISDSVSLSSEVLDENFVVIFCE 62
Query: 361 V*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSXYTNFXEDDALCVRCTTERVSLPFRT 182
TV+ +E HFL VL EL++DA ++G V LL + DDA C +E + L R
Sbjct: 63 SKTTVSWNESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR- 121
Query: 181 HVGFLEFFVRPSLFTTV 131
H F + PSL ++V
Sbjct: 122 HC-FNVSCIVPSLLSSV 137
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/86 (43%), Positives = 50/86 (58%)
Frame = +2
Query: 200 NPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXND 379
NPF GA AKG+VL + K+PNSA RKCV V+L NGK++TA++P G H
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG---HNLQEH 138
Query: 380 EXLVAGFGRKGHAVGDIPGVRFKVVK 457
++ GR D+PGV+ K V+
Sbjct: 139 NIVLCRVGR----CRDVPGVKIKCVR 160
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 56.8 bits (131), Expect = 7e-07
Identities = 36/94 (38%), Positives = 50/94 (53%)
Frame = +2
Query: 176 HMGTKWKANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 355
H+ + NP G AKG+VL V K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG- 70
Query: 356 LNHIXXNDEXLVAGFGRKGHAVGDIPGVRFKVVK 457
H ++ GR + D PGV+ K V+
Sbjct: 71 --HNLQEHNVVLVRVGR----LKDCPGVKLKCVR 98
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 56.8 bits (131), Expect = 7e-07
Identities = 36/92 (39%), Positives = 55/92 (59%)
Frame = +2
Query: 188 KWKANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 367
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G +++
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNL 74
Query: 368 XXNDEXLVAGFGRKGHAVGDIPGVRFKVVKVA 463
+ LV G GR V D+PGVR+K+++ A
Sbjct: 75 QEHSIVLVRG-GR----VKDLPGVRYKIIRGA 101
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 56.0 bits (129), Expect = 1e-06
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +2
Query: 203 PFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDE 382
P G KG+VL + K+PNSA RKC RV+L NGK+V F+P +G +++ ++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 383 XLVAGFGRKGHAVGDIPGVRFKVVK 457
LV G GR D+PGV+ K+V+
Sbjct: 119 VLVEG-GR----TQDLPGVKLKIVR 138
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 54.4 bits (125), Expect = 4e-06
Identities = 34/94 (36%), Positives = 50/94 (53%)
Frame = +2
Query: 176 HMGTKWKANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 355
H+ T+ P G AKG+VL + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG- 113
Query: 356 LNHIXXNDEXLVAGFGRKGHAVGDIPGVRFKVVK 457
H ++ GR + D+PGV+ K V+
Sbjct: 114 --HNLQEHNIVLCRVGR----LQDVPGVKLKAVR 141
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 54.4 bits (125), Expect = 4e-06
Identities = 34/94 (36%), Positives = 50/94 (53%)
Frame = +2
Query: 176 HMGTKWKANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 355
H+ T+ P G AKG+VL + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG- 99
Query: 356 LNHIXXNDEXLVAGFGRKGHAVGDIPGVRFKVVK 457
H ++ GR + D+PGV+ K V+
Sbjct: 100 --HNLQEHNIVLCRVGR----LQDVPGVKLKAVR 127
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 53.2 bits (122), Expect = 8e-06
Identities = 31/79 (39%), Positives = 52/79 (65%)
Frame = +2
Query: 227 KGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGR 406
+G++L + + K+PNSA+RKC RV+L NGK ++A +P +G +++ + LV G GR
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR 145
Query: 407 KGHAVGDIPGVRFKVVKVA 463
V D+PGV++ +V+ A
Sbjct: 146 ----VQDVPGVKYHLVRGA 160
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 52.0 bits (119), Expect = 2e-05
Identities = 34/94 (36%), Positives = 48/94 (51%)
Frame = +2
Query: 176 HMGTKWKANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 355
H+ + P G KG+VL + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG- 117
Query: 356 LNHIXXNDEXLVAGFGRKGHAVGDIPGVRFKVVK 457
H ++ GR V D PGV+ K V+
Sbjct: 118 --HNLQEHNIVLCRVGR----VQDCPGVKIKCVR 145
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 52.0 bits (119), Expect = 2e-05
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Frame = +2
Query: 53 PSVADWCRAIQMGKPRGIRT-ARKHVNHRREQRWADKEFKKAHMGTKWKAN-PFGGASHA 226
P+ A + R + M R + R + R + ++ + A TK K++ P
Sbjct: 21 PAKAAFARPVAMPVFRPATSFGRGFASSSRCEATINQIMRGARKSTKRKSSVPLLDGCFQ 80
Query: 227 KGIVLXKV-GVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFG 403
K V KV ++PNSA+RK RV+L NG+ TA++P +G +++ + LV G G
Sbjct: 81 KKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLVRGGG 137
Query: 404 RKGHAVGDIPGVRFKVVK 457
K D+PGVR+K+V+
Sbjct: 138 AK-----DLPGVRYKIVR 150
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 49.6 bits (113), Expect = 1e-04
Identities = 31/88 (35%), Positives = 44/88 (50%)
Frame = +2
Query: 194 KANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXX 373
K P G KG+VL K+PNSA RKC RV+L G++ F+P +G H
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG---HTLQ 103
Query: 374 NDEXLVAGFGRKGHAVGDIPGVRFKVVK 457
+ ++ GR D+PGV+ VV+
Sbjct: 104 EHQIVLVEGGR----TQDLPGVKLTVVR 127
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2
Query: 377 DEXLVAGFGRKGHAVGDIPGVRFKVVK 457
DE L++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 47.6 bits (108), Expect = 4e-04
Identities = 34/90 (37%), Positives = 50/90 (55%)
Frame = +2
Query: 188 KWKANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 367
K K+ +GI L V K+PNSA+RK RV+L G +VTA++P G +++
Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNL 74
Query: 368 XXNDEXLVAGFGRKGHAVGDIPGVRFKVVK 457
+ LV G GR V D+PGVR+ +V+
Sbjct: 75 QEHAVVLVRG-GR----VKDLPGVRYHIVR 99
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 46.4 bits (105), Expect = 0.001
Identities = 28/97 (28%), Positives = 53/97 (54%)
Frame = +2
Query: 167 KKAHMGTKWKANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 346
K + + K ++ F KG+ + K+PNSA+RK +++L KN K++ A++P
Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67
Query: 347 DGCLNHIXXNDEXLVAGFGRKGHAVGDIPGVRFKVVK 457
+G H + ++ GR V D+PG+++KV++
Sbjct: 68 EG---HALQDHNFVLIKKGR----VQDLPGIKYKVIR 97
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 44.4 bits (100), Expect = 0.004
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +2
Query: 227 KGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGR 406
KG+VL + + K+PNSA RK RV+L NG V+A++P +G H + GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG---HDAQEHSIVYVRGGR 114
Query: 407 KGHAVGDIPGVRFKVVKVA 463
D+PGV++ V++ A
Sbjct: 115 ----CQDLPGVKYHVIRGA 129
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 44.0 bits (99), Expect = 0.005
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +2
Query: 212 GASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLV 391
G SH KGIVL V K+PNS RKC V+L G +V A++P G +++ + + LV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 392 AGFGRK 409
G GR+
Sbjct: 129 KG-GRR 133
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 43.2 bits (97), Expect = 0.009
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +2
Query: 263 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGRKGHAVGDIPGVR 442
K+PNSA+RK ++ L N K V A+VP + + I N L+ KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 443 FKVV 454
+KV+
Sbjct: 94 YKVI 97
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 42.3 bits (95), Expect = 0.016
Identities = 30/87 (34%), Positives = 47/87 (54%)
Frame = +2
Query: 194 KANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXX 373
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + +
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 374 NDEXLVAGFGRKGHAVGDIPGVRFKVV 454
+D LV +G V D+PGV++ +V
Sbjct: 77 HDRVLV-----RGGQVPDLPGVKYHIV 98
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 41.9 bits (94), Expect = 0.021
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +2
Query: 245 KVGVXA-KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGRKGHAV 421
+VG+ K+PNS RK RV+L GK +TA++P +G ++I + LV G GR
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS---- 100
Query: 422 GDIPGVRFKVVKVA 463
D PGVR+ +V+ A
Sbjct: 101 QDCPGVRYHLVRGA 114
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 41.9 bits (94), Expect = 0.021
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +2
Query: 212 GASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLV 391
G+ +G+ V K+PNSA+RK RV+L G+ VTA++P G H ++
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIPGIG---HNAQEHAVVL 102
Query: 392 AGFGRKGHAVGDIPGVRFKVVK 457
GR D PGV++ VV+
Sbjct: 103 LRGGR----AQDCPGVQYHVVR 120
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 40.3 bits (90), Expect = 0.063
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 167 KKAHMGTKWKANPFGGASHAKGIVLXKVGVXA-KQPNSAIRKCVRVQLIKNGKKVTAFVP 343
+K K + G KG+ L K G+ K+PNS RK R++L NG VT ++P
Sbjct: 90 RKGKRARKTTSPALVGRPQMKGVCL-KTGITKPKKPNSGERKTARIRL-TNGAVVTGYIP 147
Query: 344 RDGCLNHIXXNDEXLVAGFGRKGHAVGDIPGVRF 445
+G ++I + L+ G GR D PGVR+
Sbjct: 148 GEG--HNIQQHSVVLIRG-GR----AQDCPGVRY 174
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 39.5 bits (88), Expect = 0.11
Identities = 25/77 (32%), Positives = 43/77 (55%)
Frame = +2
Query: 227 KGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGR 406
KG+ + K+PNSA RKC ++L NGK ++A++P G + + + G GR
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR 91
Query: 407 KGHAVGDIPGVRFKVVK 457
V D PG+++K+++
Sbjct: 92 ----VQDCPGIKYKIIR 104
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 39.5 bits (88), Expect = 0.11
Identities = 35/127 (27%), Positives = 61/127 (48%)
Frame = +2
Query: 77 AIQMGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLXKVGV 256
A ++ + G T + + H RE++ H + +A G +G+ L
Sbjct: 55 AFRLPQSSGFATMNQLIRHGREEK---------HRSDRKRA--LGKCPQKQGVCLRVSTR 103
Query: 257 XAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGRKGHAVGDIPG 436
K+PNSA+ K +V+L N V A++P +G +++ + LV G GR V D+PG
Sbjct: 104 TPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRG-GR----VKDLPG 155
Query: 437 VRFKVVK 457
V+F ++
Sbjct: 156 VKFHCIR 162
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 39.1 bits (87), Expect = 0.15
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +2
Query: 212 GASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLV 391
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + LV
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 392 AGFGRKGHAVGDIPGVRFKVVK 457
G GR D+ G +KVV+
Sbjct: 184 RG-GR----CQDVSGCHYKVVR 200
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 38.7 bits (86), Expect = 0.19
Identities = 33/107 (30%), Positives = 48/107 (44%)
Frame = +2
Query: 185 TKWKANPFGGASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 364
TK K+ KGI + K+PNSA RK +V L NGK + ++ +G H
Sbjct: 17 TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG---H 72
Query: 365 IXXNDEXLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKER 505
++ GR V D+PGV++ V+ L A+ KK R
Sbjct: 73 TLQEHSLVLVRGGR----VKDLPGVQYHFVR-GVYDLHAVGTRKKSR 114
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 38.3 bits (85), Expect = 0.26
Identities = 23/65 (35%), Positives = 40/65 (61%)
Frame = +2
Query: 263 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGRKGHAVGDIPGVR 442
K+PNSA+RK +V+L N + A++P +G +++ + L+ G GR V D+PGV+
Sbjct: 43 KKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR----VKDLPGVK 94
Query: 443 FKVVK 457
F ++
Sbjct: 95 FHCIR 99
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 38.3 bits (85), Expect = 0.26
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +2
Query: 212 GASHAKGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLV 391
G KG+ + V K+PNSA RK +++L + + A++P G +++ LV
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 392 AGFGRKGHAVGDIPGVRFKVVK 457
+G GR D+PGVR+ ++K
Sbjct: 83 SG-GR----APDLPGVRYTLIK 99
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 36.7 bits (81), Expect = 0.78
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +2
Query: 227 KGIVLXKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGR 406
+G + + + K+PNSA RK ++L KN KK+ A++P G + + L+ G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNT 84
Query: 407 KGHAVGDIPGVRFKVV 454
+ D+PGV K+V
Sbjct: 85 R-----DLPGVNHKIV 95
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 35.5 bits (78), Expect = 1.8
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +2
Query: 263 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGRKGHAVGDIPGVR 442
K+PNSA+RK +V+L N V +P +G H ++ GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG---HNLKEHAIILFRGGR----VRDLPGVK 97
Query: 443 FKVVKVANVSLLALYKEKKER 505
+K V+ + L + K K R
Sbjct: 98 YKAVR-GVLDLAGVQKRKTAR 117
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 33.1 bits (72), Expect = 9.6
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +2
Query: 263 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIXXNDEXLVAGFGRKGHAVGDIPGVR 442
K+ NSA+RK RV+L +G ++T ++P G ++ + LV G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 443 FKVVK 457
+ +V+
Sbjct: 228 YHIVR 232
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,110,326
Number of Sequences: 1657284
Number of extensions: 13718970
Number of successful extensions: 27338
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 26523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27243
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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