Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_F10
         (890 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41552-3|AAC69100.2|  303|Caenorhabditis elegans Dauer or aging ...   101   9e-22
AL031632-2|CAA21005.2|  789|Caenorhabditis elegans Hypothetical ...    28   7.8  

>U41552-3|AAC69100.2|  303|Caenorhabditis elegans Dauer or aging
           adult overexpressionprotein 3 protein.
          Length = 303

 Score =  101 bits (241), Expect = 9e-22
 Identities = 55/142 (38%), Positives = 76/142 (53%)
 Frame = +2

Query: 89  MAQIISGIEVAGSIXNDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYXXXXXXXXXX 268
           +A+I+SG+E +  + +D+ Q++ + R     F   LAIVQVG R DSNVY          
Sbjct: 2   VAEIVSGLEYSKKVLHDVGQKIAKTREHHPNFHAVLAIVQVGNRSDSNVYINSKLKKAKE 61

Query: 269 XXXXXXHIRLPRDITEIELLXKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDK 448
                  I+LP  IT+ +L  +I +LN    + GII+Q+PLD  H IDA  V D + P K
Sbjct: 62  IGADGKLIKLPDTITQGDLKREIMALNHDNEIDGIIIQLPLDCKHEIDADSVIDLIDPLK 121

Query: 449 XVDXLNTINEGXXAVXDLSXFI 514
            VD L  IN G  A  +L   I
Sbjct: 122 DVDGLTRINAGRLARGELQRTI 143



 Score = 34.3 bits (75), Expect = 0.12
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
 Frame = +1

Query: 523 TPAGCVELIKXTXXT---IPXKNVVVLRRSPIVGTPVSELLKXXH---XYCHS 663
           TP GC+ L++        +  K VVVL RS IVG+P + L    H     CHS
Sbjct: 147 TPFGCLYLVQQATGDANFVSGKEVVVLGRSKIVGSPAAALFLWHHGTVTICHS 199


>AL031632-2|CAA21005.2|  789|Caenorhabditis elegans Hypothetical
           protein Y32B12B.2 protein.
          Length = 789

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = +2

Query: 299 PRDITEIELLXKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKXVDXLNT 469
           PRD+TE+E    I+ L E  ++ G+ V++  D D  +D     D    D+  D  NT
Sbjct: 581 PRDLTELEEELGISILEE--TLDGMNVELLDDDDWIVDDDNDEDGECIDEEEDYDNT 635


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,478,975
Number of Sequences: 27780
Number of extensions: 230443
Number of successful extensions: 365
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)