Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_F08
(856 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 67 6e-10
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 56 1e-06
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 54 6e-06
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 52 2e-05
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 51 4e-05
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 42 0.026
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 41 0.046
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 39 0.18
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.32
UniRef50_UPI0000F2BD9E Cluster: PREDICTED: similar to vomeronasa... 37 0.56
UniRef50_Q4SSG8 Cluster: Chromosome undetermined SCAF14443, whol... 33 6.9
UniRef50_A6LZB2 Cluster: FMN-binding domain protein precursor; n... 33 6.9
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 33 9.2
UniRef50_Q8I2L7 Cluster: Putative uncharacterized protein PFI144... 33 9.2
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 66.9 bits (156), Expect = 6e-10
Identities = 36/57 (63%), Positives = 37/57 (64%)
Frame = +3
Query: 558 TSITKIDAXVRGGEXRXDYXDTXRFPLQAPSCAXXXXXXXXXXDTCSRXSPLRXAWR 728
TSITKIDA VRGGE R DY DT RFPL+APSCA DTC S LR AWR
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCA-LLFRPCRLPDTCPPFS-LREAWR 78
Score = 35.1 bits (77), Expect = 2.3
Identities = 37/102 (36%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +2
Query: 503 GTVKRPRCWRFSIGSAPLNEHHKNRRSSQRWRXPTGL*XYXAFP---PASSLVRSPGSDP 673
GT +R RC RFSIGSAPL K + FP P+ +L+ P P
Sbjct: 8 GTSQR-RC-RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 65
Query: 674 XPLTGYLFPPFXPSGXVAAFLIPXAVGXSVXCXSFRPPAGLC 799
PPF FLI AVG SV C SF P +C
Sbjct: 66 DTC-----PPFSLR-EAWRFLIAHAVGISVRCRSFAPSWAVC 101
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 56.0 bits (129), Expect = 1e-06
Identities = 37/80 (46%), Positives = 44/80 (55%)
Frame = +2
Query: 335 VCVLGALPLPRSLTRCARSFGCGERYQLTXRR*YGYPQNXGXTXERXCEXKAXXRPGTVK 514
+C G +PLPRSLTR ARSFGCGERY+LT G T + + +
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLTD----GDGNFLEDTRKTLSKEEI-------- 77
Query: 515 RPRCWRFSIGSAPLNEHHKN 574
RPR RFSIGSAPL K+
Sbjct: 78 RPRRSRFSIGSAPLTSIAKS 97
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +3
Query: 558 TSITKIDAXVRGGEXRXDYXDTXRFPLQAPSCA 656
TSI K DA + GGE R DY D RFPL APSCA
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCA 124
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 53.6 bits (123), Expect = 6e-06
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = +3
Query: 558 TSITKIDAXVRGGEXRXDYXDTXRFPLQAPSCA 656
TSITK DA + GGE R DY DT RFPL APSCA
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCA 92
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/38 (65%), Positives = 25/38 (65%)
Frame = -1
Query: 499 PXAGLXLTXSFXRXPXILWITVLPPXSELIPLAAAERP 386
P LT SF P ILWITVLPP SEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/54 (53%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 299 CINESANARGXAVCVLGALPLPRSLTRCARSFGCGERYQL-TXRR*YGYPQNXG 457
CI + A AR AV VL ALPL RS TRC RS GCG + R YG PQ G
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 41.5 bits (93), Expect = 0.026
Identities = 28/65 (43%), Positives = 33/65 (50%)
Frame = -1
Query: 778 ERXTXNXXTYSXRYEESRHAXRRGEXREQVSGKXXGVGTRRAHEGACRGKRXVSL*SXRX 599
ER + T S YE++ + G+ EQVSGK G RRAHEGA K SL
Sbjct: 37 ERPKPSRDTSSVSYEKAPRFPK-GKKAEQVSGKRQG-RNRRAHEGAAGEKSPASLSPVGF 94
Query: 598 SPPLT 584
PPLT
Sbjct: 95 RPPLT 99
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 40.7 bits (91), Expect = 0.046
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 102 DPDXXRYIDEFGQTTTRMQ 158
DPD RYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 38.7 bits (86), Expect = 0.18
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 231 QVNNNNCIHFMFQVQGXVWEVFSALMNRPTRGEXRFAYW 347
++ + NC+ + V +ALMNRPTRGE RFAYW
Sbjct: 3 ELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.32
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2
Query: 369 ERGSGRAPNTQTAXPRALADSLMQ 298
+R + APNTQTA PRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI0000F2BD9E Cluster: PREDICTED: similar to vomeronasal
receptor V1RG9; n=2; Monodelphis domestica|Rep:
PREDICTED: similar to vomeronasal receptor V1RG9 -
Monodelphis domestica
Length = 484
Score = 37.1 bits (82), Expect = 0.56
Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
Frame = +1
Query: 541 RLRPP--ERASQKSTLXSEVAXPDXTIXIPGVSPCKLPRALSWFRPLXXYRIPVPAXXPF 714
R RPP +R Q + E P +I PG P K P + PL + +PA F
Sbjct: 22 RPRPPGAQRLRQWHQVKREGGSP--SILAPGPDPDKSPPSPDELSPLQDLHLRLPASHRF 79
Query: 715 GXRGGFPHTSRCRXLXSVXVVPXPSXAVXPXPPRFXPDRLGPXXGXP 855
G +G F T+ R V + P A+ P P+ G P
Sbjct: 80 GPQGAFSLTTFPRHTPPVALPRGPLRALRPEARAGSPEHHGTRPPSP 126
>UniRef50_Q4SSG8 Cluster: Chromosome undetermined SCAF14443, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14443,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 833
Score = 33.5 bits (73), Expect = 6.9
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = -2
Query: 798 HSPAGGRN-DXHXTEXPTAXG--MRKAATXPEGXXGGNRYPVXGQGSEPGERTRELAGG 631
H A G+ D H E P + AT P G GG +P G S+PG+ GG
Sbjct: 300 HHQANGKTIDNHPDEDPDDDEEVFKTPATPPSGGDGGPAFPPAGLKSDPGQAAPTSPGG 358
>UniRef50_A6LZB2 Cluster: FMN-binding domain protein precursor; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: FMN-binding
domain protein precursor - Clostridium beijerinckii
NCIMB 8052
Length = 364
Score = 33.5 bits (73), Expect = 6.9
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 144 TTRMQXKKCFICEICD-AIALFVTIISCNKQVNNNNCIH 257
T + C C+ CD A + + I +CNK VN+ NCI+
Sbjct: 167 TIKRDANSCINCKRCDKACDMNIKISTCNKTVNSLNCIN 205
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.1 bits (72), Expect = 9.2
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 180 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGXVWEVFSALMNRPTRGEXRFAYW 347
+ DA F+ I N +N+++C + +V VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_Q8I2L7 Cluster: Putative uncharacterized protein PFI1440w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI1440w - Plasmodium falciparum
(isolate 3D7)
Length = 714
Score = 33.1 bits (72), Expect = 9.2
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 12 ITDLTYYGNS---LNDLNCWYRGRGSPFXEGXLDPDXXRYIDEFGQTTTRMQXKKCFICE 182
IT+L Y N+ NDLN Y F +DP+ ID K F +
Sbjct: 253 ITNLLYKNNNHMFYNDLNSQYYYNS--FMLKTIDPNLLYLIDNDFDLI-----KILFFFQ 305
Query: 183 ICDAIALFVTIISCNKQVNNNNCIHFMF 266
+ ++V II+C+K NN+N H M+
Sbjct: 306 VPHLFIMYVYIITCDKNKNNSNYYHNMY 333
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,225,506
Number of Sequences: 1657284
Number of extensions: 10948040
Number of successful extensions: 25469
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 24053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25439
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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