Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_F06
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 34 0.11
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.19
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.19
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.19
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.19
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.19
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.25
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 32 0.58
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.77
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 31 1.0
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.3
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.3
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 30 2.3
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 30 2.3
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 30 2.3
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 30 2.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.3
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 3.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.1
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 4.1
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 4.1
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.1
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 29 4.1
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.1
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 4.1
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 4.1
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 4.1
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 4.1
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 4.1
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 5.4
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 7.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 7.1
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.1
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.1
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.4
AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical ... 28 9.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 9.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 9.4
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 34.3 bits (75), Expect = 0.11
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPK 684
PP PPPP+ P PPP P+
Sbjct: 72 PPPPPPPMPCPPPPPPMPR 90
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 637 PPPPLXXXPXPPPRPKXP 690
PPPP+ P PPP P P
Sbjct: 66 PPPPICPPPPPPPMPCPP 83
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP P PPP P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTP 281
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP P PP P P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMP 317
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/62 (25%), Positives = 19/62 (30%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXPXXGVXHXXXXXXXXXXXXXXSFXXXGXPPPXXFXXAPPX 807
PP PPP P P P G+ + + PPP APP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 376
Query: 808 XH 813
H
Sbjct: 377 GH 378
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = +1
Query: 625 GPPXPPPPLXXXP---XPPPRPKXPXXG 699
G P PPPP P PPP P+ P G
Sbjct: 332 GMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPRP 681
GPP PPPP P PPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRP 681
PP PPPP P PPP P
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +1
Query: 625 GPPXPP--PPLXXXPXPPPRP 681
GPP PP PP+ P PPP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPP 732
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +1
Query: 625 GPPXPPPPLXXXP---XPPPRPKXPXXGVXHXXXXXXXXXXXXXXSFXXXGXPPPXXFXX 795
GPP PPPP P PPP P P G+ PPP F
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 796 APP 804
PP
Sbjct: 783 GPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPRP 681
GPP PPPP P PPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRP 681
PP PPPP P PPP P
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +1
Query: 625 GPPXPP--PPLXXXPXPPPRP 681
GPP PP PP+ P PPP P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPP 732
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +1
Query: 625 GPPXPPPPLXXXP---XPPPRPKXPXXGVXHXXXXXXXXXXXXXXSFXXXGXPPPXXFXX 795
GPP PPPP P PPP P P G+ PPP F
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Query: 796 APP 804
PP
Sbjct: 783 GPP 785
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP P PPP P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTP 291
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP P PP P P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMP 327
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/62 (25%), Positives = 19/62 (30%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXPXXGVXHXXXXXXXXXXXXXXSFXXXGXPPPXXFXXAPPX 807
PP PPP P P P G+ + + PPP APP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 386
Query: 808 XH 813
H
Sbjct: 387 GH 388
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = +1
Query: 625 GPPXPPPPLXXXP---XPPPRPKXPXXG 699
G P PPPP P PPP P+ P G
Sbjct: 342 GMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPRP 681
GPP PPPP P PPP P
Sbjct: 340 GPPPPPPPPGGCPPPPPPP 358
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRP 681
PP PPPP P PPP P
Sbjct: 342 PPPPPPPGGCPPPPPPPP 359
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +1
Query: 625 GPPXPP--PPLXXXPXPPPRP 681
GPP PP PP+ P PPP P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPP 315
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +1
Query: 625 GPPXPPPPLXXXP---XPPPRPKXPXXGVXHXXXXXXXXXXXXXXSFXXXGXPPPXXFXX 795
GPP PPPP P PPP P P G+ PPP F
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPP--PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Query: 796 APP 804
PP
Sbjct: 366 GPP 368
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.25
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRP 681
PP PPPP+ P PPP P
Sbjct: 578 PPPPPPPMLGGPPPPPPP 595
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRP 681
PP PPP L P PPP P
Sbjct: 579 PPPPPPMLGGPPPPPPPP 596
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP PPP P P
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPP 596
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +1
Query: 628 PPXPPPPLXXX---PXPPPRPKXPXXG 699
PP PPPPL PPP P P G
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLG 587
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPK 684
PP PPPP P P PRP+
Sbjct: 97 PPPPPPPTQPEPEPEPRPE 115
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRP 681
PP PPPP P PPP P
Sbjct: 65 PPPPPPPPMCPPPPPPMP 82
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPP 675
PP PPPP P PPP
Sbjct: 64 PPPPPPPPPMCPPPPP 79
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 637 PPPPLXXXPXPPPRP 681
PPPP+ P PPP P
Sbjct: 57 PPPPMCPPPPPPPPP 71
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXPXXG 699
PP PPPP P P PK P G
Sbjct: 85 PPPPPPPPQPAPAQAPAPKYPSPG 108
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP P PPP P+ P
Sbjct: 354 PPAPPPP-PPPPPPPPPPQTP 373
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +1
Query: 628 PPXPPPPLXXXPXP-PPRPKXP 690
PP PPPP P PPRPK P
Sbjct: 114 PPPPPPPSGLGVAPQPPRPKTP 135
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 637 PPPPLXXXPXPPPRP 681
PPPP+ P PPP P
Sbjct: 106 PPPPMFGAPPPPPPP 120
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G GRGGG G GGGG GG
Sbjct: 100 GGGGRGGGGGGRGGGGGGGGG 120
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 93 GRGGGGGGGGGRGGGGGGRGG 113
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 103 GRGGGGGGRGGGGGGGGGRGG 123
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 110 GRGGGGGGGGGRGGGGGGRGG 130
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP P PPP P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP P PPP P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 631 PXPPPPLXXXPXPPPRPKXP 690
P PPPP P P P PK P
Sbjct: 637 PQPPPPPSPSPEPEPEPKPP 656
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXPXXGVXH 708
PP PP P PPP P P G+ H
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGGLMH 821
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXPXXGVXH 708
PP PP P PPP P P G+ H
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGGLMH 821
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 698 PXXGXLGRGGGXGXXXXGGGGXGG 627
P G G GGG G GGGG GG
Sbjct: 21 PSGGGGGGGGGCGGGCGGGGGCGG 44
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 131 GGCGGGGGGGCGGGGGGGCGG 151
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 168 GGCGGGGGGGCGGGGGGGCGG 188
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP+ P PPRP P
Sbjct: 147 PPRPPPPVELSP--PPRPPPP 165
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP+ P PPRP P
Sbjct: 788 PPRPPPPVELSP--PPRPPPP 806
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP+ P PPRP P
Sbjct: 788 PPRPPPPVELSP--PPRPPPP 806
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP+ P PPRP P
Sbjct: 788 PPRPPPPVELSP--PPRPPPP 806
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPP 675
PP PPPP P PPP
Sbjct: 87 PPPPPPPTLKAPPPPP 102
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Frame = +1
Query: 628 PPXPPPP----LXXXPXPPPRPKXP 690
PP PPPP L P PPP P P
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPP 93
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRP 681
PP PPPP PPP P
Sbjct: 85 PPPPPPPPPTLKAPPPPP 102
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 478 GSFGGGGGGGGFGGGGGGFGG 498
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPP P PP P P
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPP 152
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +1
Query: 628 PPXPPPPLXXXPXP--PPRPKXP 690
PP PPPP P P PP P P
Sbjct: 133 PPPPPPPHYPPPPPHYPPPPPAP 155
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPP P PPP P P
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPP 1363
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPRPKXP 690
GP P P+ P PPPRP P
Sbjct: 1092 GPGPPAVPVRKAPPPPPRPVIP 1113
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPRPKXP 690
GP P P+ P PPPRP P
Sbjct: 1086 GPGPPAVPVRKAPPPPPRPVIP 1107
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 96 GGAGGGGGGGYATGGGGGGGG 116
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 106 GGCGGGGGGGCGGGGGGGCGG 126
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 114 GGCGGGGGGGCGGGGGGGGGG 134
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGG 173
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 153 GGCGGGGGGGCGGGGGGGCGG 173
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRP 681
PP PPPP P PP P
Sbjct: 52 PPPPPPPAPKVPEPPKAP 69
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 631 PXPPPPLXXXPXPPPRPKXPXXG 699
P PPP P PPP P P G
Sbjct: 41 PPPPPMCGCAPPPPPPPPPPMCG 63
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPRPKXP 690
GP P P+ P PPPRP P
Sbjct: 1092 GPGPPAVPVRKAPPPPPRPVIP 1113
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPRPKXP 690
GP P P+ P PPPRP P
Sbjct: 1086 GPGPPAVPVRKAPPPPPRPVIP 1107
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPR 678
GPP PPP P PPP+
Sbjct: 94 GPPPPPPHYYTQPPPPPQ 111
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPRPKXP 690
GP P P+ P PPPRP P
Sbjct: 1086 GPGPPAVPVRKAPPPPPRPVIP 1107
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 625 GPPXPPPPLXXXPXPPPRPKXP 690
GP P P+ P PPPRP P
Sbjct: 1092 GPGPPAVPVRKAPPPPPRPVIP 1113
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G RGGG G GGGG GG
Sbjct: 139 GGAPRGGGRGGSRRGGGGRGG 159
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 784 GSSGGGGGGGNGGSGGGGGGG 804
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 175 GHHGGGGGGGSHHHGGGGGGG 195
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRP 681
PP PPPPL P P P
Sbjct: 756 PPPPPPPLAAAPPQPKNP 773
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXG 630
G GRGGG G GGGG G
Sbjct: 161 GGGGRGGGGGRGGGGGGGAG 180
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 5/26 (19%)
Frame = +1
Query: 628 PPXPPPPL-----XXXPXPPPRPKXP 690
PP PPPPL P PPP P P
Sbjct: 73 PPLPPPPLPLSNPPAKPTPPPPPPKP 98
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 5/26 (19%)
Frame = +1
Query: 628 PPXPPPPL-----XXXPXPPPRPKXP 690
PP PPPPL P PPP P P
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPPPPPKP 320
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 680 GRGGGXGXXXXGGGGXGG 627
G GGG G GGGG GG
Sbjct: 86 GAGGGGGYGAGGGGGGGG 103
>AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical
protein F33E11.2 protein.
Length = 366
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP PPPPL P PP R + P
Sbjct: 240 PPPPPPPL---PLPPVRRRAP 257
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 628 PPXPPPPLXXXPXPPPRPKXP 690
PP P P P PPP P+ P
Sbjct: 135 PPTPAAPPPPPPPPPPAPEAP 155
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 689 GXLGRGGGXGXXXXGGGGXGG 627
G G GGG G GGGG GG
Sbjct: 192 GMGGYGGGMGGGGYGGGGMGG 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,832,817
Number of Sequences: 27780
Number of extensions: 221292
Number of successful extensions: 2718
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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