Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E24
         (843 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023192-1|BAA76819.1| 1528|Homo sapiens KIAA0975 protein protein.     31   5.2  
BC056900-1|AAH56900.1| 1504|Homo sapiens nischarin protein.            30   9.1  
BC038102-1|AAH38102.1| 1504|Homo sapiens nischarin protein.            30   9.1  
AL117432-1|CAB55920.1|  993|Homo sapiens hypothetical protein pr...    30   9.1  
AF082516-1|AAC33104.1| 1504|Homo sapiens I-1 receptor candidate ...    30   9.1  

>AB023192-1|BAA76819.1| 1528|Homo sapiens KIAA0975 protein protein.
          Length = 1528

 Score = 31.1 bits (67), Expect = 5.2
 Identities = 27/94 (28%), Positives = 34/94 (36%)
 Frame = -2

Query: 464  GXLGGGIGXXXXGXPAGXE*SFRXKXXQSAPRSTMRPXSVRCPERAPAEAALSLWRSLKS 285
            G  G   G    G PA    S   +  Q  P   + P  V  P  APA AA S     K+
Sbjct: 1042 GTGGSAQGSFADGQPAERRAS-NDQRPQEVPAEALAPAPVEVP--APAPAAASASGPAKT 1098

Query: 284  ADPMALSTFLSLPVRGTFRAAPEVPSEFTVKLPA 183
              P   ST   +P      A    P+E   + P+
Sbjct: 1099 PAPAEASTSALVPEETPVEAPAPPPAEAPAQYPS 1132


>BC056900-1|AAH56900.1| 1504|Homo sapiens nischarin protein.
          Length = 1504

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 27/94 (28%), Positives = 34/94 (36%)
 Frame = -2

Query: 464  GXLGGGIGXXXXGXPAGXE*SFRXKXXQSAPRSTMRPXSVRCPERAPAEAALSLWRSLKS 285
            G  G   G    G PA    S   +  Q  P   + P  V  P  APA AA S     K+
Sbjct: 1018 GTGGSPQGSFADGQPAERRAS-NDQRPQEVPAEALAPAPVEVP--APAPAAASASGPAKT 1074

Query: 284  ADPMALSTFLSLPVRGTFRAAPEVPSEFTVKLPA 183
              P   ST   +P      A    P+E   + P+
Sbjct: 1075 PAPAEASTSALVPEETPVEAPAPPPAEAPAQYPS 1108


>BC038102-1|AAH38102.1| 1504|Homo sapiens nischarin protein.
          Length = 1504

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 27/94 (28%), Positives = 34/94 (36%)
 Frame = -2

Query: 464  GXLGGGIGXXXXGXPAGXE*SFRXKXXQSAPRSTMRPXSVRCPERAPAEAALSLWRSLKS 285
            G  G   G    G PA    S   +  Q  P   + P  V  P  APA AA S     K+
Sbjct: 1018 GTGGSPQGSFADGQPAERRAS-NDQRPQEVPAEALAPAPVEVP--APAPAAASASGPAKT 1074

Query: 284  ADPMALSTFLSLPVRGTFRAAPEVPSEFTVKLPA 183
              P   ST   +P      A    P+E   + P+
Sbjct: 1075 PAPAEASTSALVPEETPVEAPAPPPAEAPAQYPS 1108


>AL117432-1|CAB55920.1|  993|Homo sapiens hypothetical protein
           protein.
          Length = 993

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 27/94 (28%), Positives = 34/94 (36%)
 Frame = -2

Query: 464 GXLGGGIGXXXXGXPAGXE*SFRXKXXQSAPRSTMRPXSVRCPERAPAEAALSLWRSLKS 285
           G  G   G    G PA    S   +  Q  P   + P  V  P  APA AA S     K+
Sbjct: 507 GTGGSPQGSFADGQPAERRAS-NDQRPQEVPAEALAPAPVEVP--APAPAAASASGPAKT 563

Query: 284 ADPMALSTFLSLPVRGTFRAAPEVPSEFTVKLPA 183
             P   ST   +P      A    P+E   + P+
Sbjct: 564 PAPAEASTSALVPEETPVEAPAPPPAEAPAQYPS 597


>AF082516-1|AAC33104.1| 1504|Homo sapiens I-1 receptor candidate
            protein protein.
          Length = 1504

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 27/94 (28%), Positives = 34/94 (36%)
 Frame = -2

Query: 464  GXLGGGIGXXXXGXPAGXE*SFRXKXXQSAPRSTMRPXSVRCPERAPAEAALSLWRSLKS 285
            G  G   G    G PA    S   +  Q  P   + P  V  P  APA AA S     K+
Sbjct: 1018 GTGGSPQGSFADGQPAERRAS-NDQRPQEVPAEALAPAPVEVP--APAPAAASASGPAKT 1074

Query: 284  ADPMALSTFLSLPVRGTFRAAPEVPSEFTVKLPA 183
              P   ST   +P      A    P+E   + P+
Sbjct: 1075 PAPAEASTSALVPEETPVEAPAPPPAEAPAQYPS 1108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,016,485
Number of Sequences: 237096
Number of extensions: 1937187
Number of successful extensions: 24285
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22167
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)