Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E24
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 1.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.1
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 4.1
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 5.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 26 6.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/71 (26%), Positives = 21/71 (29%)
Frame = +1
Query: 568 PPXNXXXXXFFFXPXXXXTXXXPPPXXPPXXXRXPXXXXXPHXXXGGXXXXKKXLXXXXP 747
PP FF P PPP P P GG + P
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFA------GGIPPPPPMMGGIPP 106
Query: 748 PPXLXXXPPPP 780
PP + PPPP
Sbjct: 107 PPPMFGAPPPP 117
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.1 bits (57), Expect(2) = 1.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 843 GGXXXGGXXXXXXXXGGXXXXGGGGXXXKXGGG 745
GG GG GG GGGG GGG
Sbjct: 145 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 177
Score = 21.8 bits (44), Expect(2) = 1.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 654 GGXXGGGGXXXXXXXXGKKK 595
GG GGGG G+KK
Sbjct: 175 GGGCGGGGGGGCGGGCGRKK 194
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 1.8
Identities = 29/122 (23%), Positives = 32/122 (26%)
Frame = +1
Query: 415 PAGKPXXXXPIPPPNXPPXXXXPXFXKNF*TPPX*KXFSXXXXXXXXXXPPPPXNXXXXX 594
P G P P+ N PP P + PP PPPP
Sbjct: 472 PPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPL 531
Query: 595 FFFXPXXXXTXXXPPPXXPPXXXRXPXXXXXPHXXXGGXXXXKKXLXXXXPPPXLXXXPP 774
P PPP P P G K + PPP PP
Sbjct: 532 STGAP-----TPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPP---PPPP 583
Query: 775 PP 780
PP
Sbjct: 584 PP 585
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 740 GXPPPXFXXXPPPPXXXXPPXXXXXXXXPP 829
G PPP PPPP PP PP
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +2
Query: 632 PPPPXXPPXXXGAXXXXXXXTXXGXGXXXXKKXFXXGXPPPXFXXXPPPPXXXXPPXXXX 811
PPPP P G + PPP PPPP PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 812 XXXXPP 829
PP
Sbjct: 295 GSPPPP 300
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 746 PPPXFXXXPPPPXXXXPPXXXXXXXXPP 829
PPP PPPP PP PP
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 740 GXPPPXFXXXPPPPXXXXPPXXXXXXXXPP 829
G PPP PPPP PP PP
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +2
Query: 632 PPPPXXPPXXXGAXXXXXXXTXXGXGXXXXKKXFXXGXPPPXFXXXPPPPXXXXPPXXXX 811
PPPP P G + PPP PPPP PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 812 XXXXPP 829
PP
Sbjct: 316 GSPPPP 321
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 746 PPPXFXXXPPPPXXXXPPXXXXXXXXPP 829
PPP PPPP PP PP
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 740 GXPPPXFXXXPPPPXXXXPPXXXXXXXXPP 829
G PPP PPPP PP PP
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +2
Query: 632 PPPPXXPPXXXGAXXXXXXXTXXGXGXXXXKKXFXXGXPPPXFXXXPPPPXXXXPPXXXX 811
PPPP P G + PPP PPPP PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRT--GSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 812 XXXXPP 829
PP
Sbjct: 301 GSPPPP 306
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 746 PPPXFXXXPPPPXXXXPPXXXXXXXXPP 829
PPP PPPP PP PP
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = -1
Query: 372 ALNDAPTFCTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAG 244
A NDA F T A+P GGS+ + AV G P GA + V G
Sbjct: 86 ASNDAGYFAT-PPAAPAGGSSTMTAV--GGAPRGASTMTAVGG 125
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -2
Query: 482 GXXXXGGXLGGGIGXXXXGXPAGXE*SFRXKXXQSAPRSTMRPXSVRCPERAPAEAA 312
G GG GGG G AG E +AP P PE PA AA
Sbjct: 12 GGGGGGGGGGGGGGEAGYSGGAGVEAPPPPPPADAAPAPAPEPAPAPAPEAVPAPAA 68
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 25.8 bits (54), Expect(2) = 6.1
Identities = 21/76 (27%), Positives = 22/76 (28%)
Frame = +1
Query: 427 PXXXXPIPPPNXPPXXXXPXFXKNF*TPPX*KXFSXXXXXXXXXXPPPPXNXXXXXFFFX 606
P P PPP+ PP P T P S PPPP
Sbjct: 436 PTRVAPPPPPSAPPTIKFPIS-----TGP--SYSSTTPPTTPKPAPPPPSRIPNPSPSPQ 488
Query: 607 PXXXXTXXXPPPXXPP 654
P PPP PP
Sbjct: 489 PAEVSKSPPPPPPLPP 504
Score = 21.0 bits (42), Expect(2) = 6.1
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 745 PPPXLXXXPPPP 780
PPP PPPP
Sbjct: 512 PPPPPPPPPPPP 523
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 634 PPPXXPPXXXRXPXXXXXPHXXXGGXXXXKKXLXXXXPPPXLXXXPPPP 780
PPP PP P GG PPP PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 634 PPPXXPPXXXRXPXXXXXPHXXXGGXXXXKKXLXXXXPPPXLXXXPPPP 780
PPP PP P GG PPP PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 634 PPPXXPPXXXRXPXXXXXPHXXXGGXXXXKKXLXXXXPPPXLXXXPPPP 780
PPP PP P GG PPP PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 746 PPPXFXXXPPPPXXXXPPXXXXXXXXPP 829
PPP PPPP PP PP
Sbjct: 175 PPPPTTKAPPPPTTKAPPPPTTKAPPPP 202
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 746 PPPXFXXXPPPPXXXXPPXXXXXXXXPP 829
PPP PPPP PP PP
Sbjct: 183 PPPPTTKAPPPPTTKAPPPPTTKAPPPP 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,111,056
Number of Sequences: 27780
Number of extensions: 248872
Number of successful extensions: 1437
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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