Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E22
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0509 - 4029739-4029890,4031064-4031208,4031665-4031709,403...    40   0.003
10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454           33   0.40 
04_03_0112 - 11369013-11369193,11369194-11369354,11370281-113703...    31   1.2  
02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087     29   6.5  

>12_01_0509 -
           4029739-4029890,4031064-4031208,4031665-4031709,
           4031800-4031899,4032013-4032140,4032548-4032712,
           4033033-4033162,4033252-4033412,4034306-4034351,
           4034429-4034494,4034579-4034664,4035811-4035849
          Length = 420

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
 Frame = +1

Query: 238 LKSAKEIVILSGAGISAESGIPTFRGAGGLWEEISSFGLSNXRSF*RKSKLSMGILPLQK 417
           +  +K++++L+GAG+S ESGIP +R   G +   S F     + F R  +          
Sbjct: 39  IDQSKKLMVLTGAGMSTESGIPDYRSPNGAYS--SGFKPLTHQEFVRSIRARRRYWARSY 96

Query: 418 RGGQ--QRRKPNAGHFGYC*NSKXTMXFPKKITVITQNVGWVTCPEQETKRLIXLHXNLY 591
            G +  +R +PN+ H+             +  +++TQNV       +   + + LH ++Y
Sbjct: 97  AGWRRFRRAQPNSAHYALA----SLERIGRVHSMVTQNVD--RLHHRAGSKPVELHGSVY 150

Query: 592 QNSMYKC 612
           + +   C
Sbjct: 151 EVACLDC 157



 Score = 36.3 bits (80), Expect = 0.032
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 715 LPXCKKAHCGALLTPHIVWFXESLEHDILEAAEHAMSTCDVCLXVGTS 858
           +P C +  CG +L P +V F +++  +  E+ + A   CD  L VG++
Sbjct: 218 IPSCNQ--CGGVLKPDVVMFGDNVPEERAESTKEAARNCDALLVVGSA 263


>10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454
          Length = 748

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 486 HGIPKKNYSNYS-ECXMGYMPRAGNEKIDXASXKF 587
           HG  +    +Y  +C  GY PR G  KID  S KF
Sbjct: 324 HGDCRNTVGDYHCKCRTGYQPRGGGPKIDECSQKF 358


>04_03_0112 -
           11369013-11369193,11369194-11369354,11370281-11370383,
           11370467-11370534,11372340-11372393,11374173-11374251,
           11376054-11376133,11376584-11376692,11376813-11376913,
           11378407-11378526,11379613-11379642,11380591-11380689
          Length = 394

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +1

Query: 724 CKKAHCGALLTPHIVWFXESLEHDILEAAEHAMSTCDVCLXVGTSSVXYPA 876
           C   +CGA L   ++ + ++L  + ++AA+      D+ L +GTS    PA
Sbjct: 136 CSDKNCGARLKDTVLDWEDALPPEEMDAAKEQCQKADLVLCLGTSLQITPA 186


>02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087
          Length = 790

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +2

Query: 368 AFRESPSLVWEFYHYRREVGSKGESLMRDILAIAKIRRXPWXSQKKLQ*LLRMXDGLHAQ 547
           A +++ SL +E    ++E+  +G+    D+ ++   RR    SQKK+  L      L A 
Sbjct: 99  AQKQAASLQYEVRMLQKELEIRGQEREYDLQSVDASRRQQAESQKKIALLEGECQRLRAM 158

Query: 548 SRKR 559
            RKR
Sbjct: 159 VRKR 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,201,301
Number of Sequences: 37544
Number of extensions: 343319
Number of successful extensions: 823
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)