Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E22
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50177-6|CAA90547.1| 287|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z50177-4|CAA90546.1| 287|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical pr... 38 0.009
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 38 0.013
Z50177-5|CAE46663.1| 289|Caenorhabditis elegans Hypothetical pr... 36 0.038
AF039045-5|AAB94198.1| 154|Caenorhabditis elegans Hypothetical ... 29 4.4
AF039045-1|AAK71362.1| 154|Caenorhabditis elegans Hypothetical ... 29 4.4
>Z50177-6|CAA90547.1| 287|Caenorhabditis elegans Hypothetical
protein F46G10.3 protein.
Length = 287
Score = 41.9 bits (94), Expect = 6e-04
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 16/232 (6%)
Frame = +1
Query: 211 SDFSKFRVALKSAKEIVILSGAGISAESGIPTFRGAG-GLWEEISSFGLSNXRSF*RKSK 387
+ KF+ + + +++I++GAGIS ESGIP +R GL+ + ++ + F + K
Sbjct: 15 NSLKKFKSLVGTVDKLLIITGAGISTESGIPDYRSKDVGLYTK-TALEPIYFQDFMKSKK 73
Query: 388 LSMGILPLQKRGGQQ--RRKPNAGHFGYC*NSKXTMXFPKKITVITQNVGWVTCPEQETK 561
+ + PN H+ SK K +ITQNV + + +K
Sbjct: 74 CRQRYWSRSYLNWPRFAQALPNFNHYAL---SKWEAA-NKFHWLITQNVDGLHL-KAGSK 128
Query: 562 RLIXLHXNLYQNSMYKCXEXLXNNDXPICXAXANRG------APXSNMVGSDIPVKL--- 714
+ LH N Q C AN G +P + +D + L
Sbjct: 129 MITELHGNALQVKCTSCEYIETRQTYQDRLNYANPGFKEQFVSPGQQELDADTALPLGSE 188
Query: 715 ----LPXCKKAHCGALLTPHIVWFXESLEHDILEAAEHAMSTCDVCLXVGTS 858
+P C +CG L+ + F E+L D ++ ++ C+ L +GTS
Sbjct: 189 QGFKIPEC--LNCGGLMKTDVTLFGENLNTDKIKVCGKKVNECNGVLTLGTS 238
>Z50177-4|CAA90546.1| 287|Caenorhabditis elegans Hypothetical
protein F46G10.7a protein.
Length = 287
Score = 41.1 bits (92), Expect = 0.001
Identities = 59/234 (25%), Positives = 93/234 (39%), Gaps = 18/234 (7%)
Frame = +1
Query: 211 SDFSKFRVALKSAKEIVILSGAGISAESGIPTFRGAG-GLWEEISS----FGLSNXRSF* 375
+ KF + + +++++SGAGIS ESGIP +R GL+ I+ F +
Sbjct: 15 NSLKKFISLIGTVDKLLVISGAGISTESGIPDYRSKDVGLYARIAHKPIYFQDYMRSNRC 74
Query: 376 RKSKLSMGILPLQKRGGQQRRKPNAGHFGYC*NSKXTMXFPKKITVITQNVGWVTCPEQE 555
R+ S L + G + PN H+ SK + +ITQNV + +
Sbjct: 75 RQRYWSRNFLAWPRFG---QAAPNINHYAL---SKWEAS-DRFQWLITQNVDGLHL-KAG 126
Query: 556 TKRLIXLHXNLYQNSMYKCXEXLXNNDXPICXAXANRG------APXSNMVGSDIPVKL- 714
+K + LH + Q C AN G AP DI + L
Sbjct: 127 SKMVTELHGSALQVKCTTCDYIESRQTYQDRLDYANPGFKEEHVAPGELAPDGDIILPLG 186
Query: 715 ------LPXCKKAHCGALLTPHIVWFXESLEHDILEAAEHAMSTCDVCLXVGTS 858
+P C CG L+ + +F E++ D + ++ CD L +GTS
Sbjct: 187 TEKGFQIPECPS--CGGLMKTDVTFFGENVNMDKVNFCYEKVNECDGILSLGTS 238
>Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical
protein R11A8.4 protein.
Length = 607
Score = 37.9 bits (84), Expect = 0.009
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 241 KSAKEIVILSGAGISAESGIPTFRGAGGLWEEISS 345
K+ K I++L+GAG+S GIP FR G++ + S
Sbjct: 143 KTKKHILVLTGAGVSVSCGIPDFRSKDGIYARLRS 177
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 217 FSKFRVALKSAKEIVILSGAGISAESGIPTFRGAGGLW 330
++ F A ++ K I +L GAG+S S +P FRG G+W
Sbjct: 45 YNHFVQAKQTGKPIFVLIGAGVSTGSKLPDFRGKQGVW 82
>Z50177-5|CAE46663.1| 289|Caenorhabditis elegans Hypothetical
protein F46G10.7b protein.
Length = 289
Score = 35.9 bits (79), Expect = 0.038
Identities = 59/236 (25%), Positives = 93/236 (39%), Gaps = 20/236 (8%)
Frame = +1
Query: 211 SDFSKFRVALKSAKEIVILSGAGISAES--GIPTFRGAG-GLWEEISS----FGLSNXRS 369
+ KF + + +++++SGAGIS ES GIP +R GL+ I+ F +
Sbjct: 15 NSLKKFISLIGTVDKLLVISGAGISTESVPGIPDYRSKDVGLYARIAHKPIYFQDYMRSN 74
Query: 370 F*RKSKLSMGILPLQKRGGQQRRKPNAGHFGYC*NSKXTMXFPKKITVITQNVGWVTCPE 549
R+ S L + G + PN H+ SK + +ITQNV + +
Sbjct: 75 RCRQRYWSRNFLAWPRFG---QAAPNINHYAL---SKWEAS-DRFQWLITQNVDGLHL-K 126
Query: 550 QETKRLIXLHXNLYQNSMYKCXEXLXNNDXPICXAXANRG------APXSNMVGSDIPVK 711
+K + LH + Q C AN G AP DI +
Sbjct: 127 AGSKMVTELHGSALQVKCTTCDYIESRQTYQDRLDYANPGFKEEHVAPGELAPDGDIILP 186
Query: 712 L-------LPXCKKAHCGALLTPHIVWFXESLEHDILEAAEHAMSTCDVCLXVGTS 858
L +P C CG L+ + +F E++ D + ++ CD L +GTS
Sbjct: 187 LGTEKGFQIPECPS--CGGLMKTDVTFFGENVNMDKVNFCYEKVNECDGILSLGTS 240
>AF039045-5|AAB94198.1| 154|Caenorhabditis elegans Hypothetical
protein F15E11.1 protein.
Length = 154
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 339 IKLRP*QXQELLEKVQA*YGNFTTTEERW 425
+KL P Q ++LEKV G FTT + W
Sbjct: 45 VKLEPNQSAQILEKVHYNTGPFTTGTDNW 73
>AF039045-1|AAK71362.1| 154|Caenorhabditis elegans Hypothetical
protein F15E11.14 protein.
Length = 154
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 339 IKLRP*QXQELLEKVQA*YGNFTTTEERW 425
+KL P Q ++LEKV G FTT + W
Sbjct: 45 VKLEPNQSAQILEKVHYNTGPFTTGTDNW 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,739,453
Number of Sequences: 27780
Number of extensions: 305827
Number of successful extensions: 614
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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