Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E21
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0904 + 22455315-22455475,22456917-22457412                       30   2.1  
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817           29   3.8  

>08_02_0904 + 22455315-22455475,22456917-22457412
          Length = 218

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = -3

Query: 367 SNNFLSVADPQLVAVLHGVPSLVNDQVVNYILDDGALGLGSHIPSSDGQHCRS 209
           S++ +S+ + +L   LH  PSL ND+  + + +  AL LGS  P +     RS
Sbjct: 142 SSSSISIEETELTEQLHSPPSLANDE-NSAVYNAPALQLGSCDPKTSSVPVRS 193


>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
          Length = 958

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/54 (25%), Positives = 19/54 (35%)
 Frame = +1

Query: 700 SFQPXPSTKKXXPGSSIYQSPNSNEWPWXPRLPXVHPLXXTXXAPXTPMAXXXP 861
           S QP P++      S+  Q+   N WPW  +   V P          P     P
Sbjct: 762 SSQPDPNSSLMNNSSAAPQAVQPNHWPWLQQAGMVQPSHIVPPEQPAPQTFQAP 815


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,651,752
Number of Sequences: 37544
Number of extensions: 452538
Number of successful extensions: 1022
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)