Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E21
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70307-3|CAA94329.1|  308|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical ...    30   1.9  
U58754-5|AAB00672.2|  330|Caenorhabditis elegans Serpentine rece...    29   5.8  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    28   7.7  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z70307-3|CAA94329.1|  308|Caenorhabditis elegans Hypothetical
           protein C39E9.3 protein.
          Length = 308

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -2

Query: 869 GXPGXXXAIGVXGAFXVSXRGCTXGNRGSQGHSLELG 759
           G PG    IG  G    S    T GN G+ GH+ ELG
Sbjct: 160 GPPGAPGKIGPRGQRGQSGGAGTPGNNGAPGHNGELG 196


>AL110498-7|CAB57909.2|  302|Caenorhabditis elegans Hypothetical
           protein Y64G10A.1 protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +2

Query: 110 CACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWN 241
           CA +  A ++LNY RT L+    +NC     P TT + +  A N
Sbjct: 38  CATTCGACSNLNYTRTCLS-DGLKNCACVGEPTTTMLCNTIACN 80


>U58754-5|AAB00672.2|  330|Caenorhabditis elegans Serpentine
           receptor, class sx protein14 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 89  FHFVRSLSDRLQVCNPKS*EFPIVRSY 9
           F F+  + + L +CNP S   PIVRSY
Sbjct: 147 FGFMYLVEEALPMCNPPSALHPIVRSY 173


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 164 TKTSRRNCTTASSPATTTVLSVRAWNMRAKAKGSIIQNVVNNL 292
           T+    N TT   PA+TT           K K + +QN+++ L
Sbjct: 441 TQAGSGNATTVDDPASTTTSKENPAAQPPKPKSAAVQNLISQL 483


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +2

Query: 164 TKTSRRNCTTASSPATTTVLSVRAWNMRAKAKGSIIQNVVNNL 292
           T+    N TT   PA+TT           K K + +QN+++ L
Sbjct: 441 TQAGSGNATTVDDPASTTTSKENPAAQPPKPKSAAVQNLISQL 483


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,142,006
Number of Sequences: 27780
Number of extensions: 353009
Number of successful extensions: 949
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)