Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E19
(1178 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.018
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.018
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.018
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 34 0.17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.22
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.22
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 34 0.22
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.30
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.30
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 33 0.39
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 33 0.52
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 33 0.52
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 32 0.91
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.2
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 31 1.6
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.1
U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical pr... 31 2.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 25 2.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 25 2.5
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 2.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 2.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 3.7
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 3.7
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 30 3.7
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 3.7
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 4.8
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 4.8
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 6.4
U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical pr... 29 6.4
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 29 6.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.018
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +1
Query: 889 PP--GXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
PP G PPP PP G GGP PP G P G P PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGGCPPPPPP 774
Score = 36.7 bits (81), Expect = 0.032
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +1
Query: 889 PP--GXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
PP G PPP PP G GGP PP GG G P PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGG----CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 892 PGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
P PP PP GG P PP GG + P P PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP---PPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.018
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +1
Query: 889 PP--GXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
PP G PPP PP G GGP PP G P G P PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGGCPPPPPP 774
Score = 36.7 bits (81), Expect = 0.032
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +1
Query: 889 PP--GXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
PP G PPP PP G GGP PP GG G P PPPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGG----CPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 892 PGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
P PP PP GG P PP GG + P P PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP---PPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.018
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +1
Query: 889 PP--GXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
PP G PPP PP G GGP PP G P G P PPPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGGCPPPPPP 357
Score = 36.7 bits (81), Expect = 0.032
Identities = 22/59 (37%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +1
Query: 889 PP--GXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
PP G PPP PP G GGP PP GG G P PPPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGG----CPPPPPPPPPGGFKGGPPPPPPP 373
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 892 PGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
P PP PP GG P PP GG + P P PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP---PPPPPP 348
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.17
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G F G GGG GGGG GG
Sbjct: 62 GGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGG 94
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGG 985
GGGG G F G GG GGGG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGG 79
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.22
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
PP PPP G G P PP G + P G P PPPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 892 PGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPP 1056
PG PPP PP G GG PP P P PPP
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 33.9 bits (74), Expect = 0.22
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
PP PPP G G P PP G + P G P PPPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +1
Query: 892 PGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPP 1056
PG PPP PP G GG PP P P PPP
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.9 bits (74), Expect = 0.22
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGGXXVXPP 943
GGG G GWGG GGGG GG PP
Sbjct: 111 GGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPP 149
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGG 985
G GG G + GWGG GGGG
Sbjct: 21 GPGGWGGGPGRWGGWGGNRWGGGGG 45
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 1177 GWXGXGXGGXGGXGGGXXXG 1118
GW G GG GG GGG G
Sbjct: 124 GWGGNNGGGGGGRGGGGRGG 143
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.30
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPP 973
GGGG G G GGG GGG PPP
Sbjct: 28 GGGGCGGGCGGGGGCGGGGGCGGGCAPPP 56
Score = 30.7 bits (66), Expect = 2.1
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 1056 GGGXGXPXXXFXGWGGGXXXGGGGXPPP 973
GGG G G GGG GGG PPP
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPPP 113
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 145 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 177
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 152 GGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGG 184
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGG 155
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGG 169
Score = 29.5 bits (63), Expect = 4.8
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXG-GXXVXPP 943
GGGG G G GGG GGGG G G PP
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPP 112
Score = 28.7 bits (61), Expect = 8.4
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 7/40 (17%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGG-------GXPPPXXGG 961
GGGG G G GGG GGG PPP GG
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGG 63
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.30
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPP 1056
P G PPP PP G G PP G P G P PPP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGSPPPPP 284
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
P G PPP P G PP G P G PPPP
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.30
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPP 1056
P G PPP PP G G PP G P G P PPP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGSPPPPP 305
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
P G PPP P G PP G P G PPPP
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.30
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPP 1056
P G PPP PP G G PP G P G P PPP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS----PPPPRTGSPPPPPTGSPPPPP 290
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPP 1059
P G PPP P G PP G P G PPPP
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 33.1 bits (72), Expect = 0.39
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -3
Query: 1056 GGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGGXXVXPPXCFLAA 925
GGG + G GGG GGGG GG C+L A
Sbjct: 10 GGGNAGAQSAYFGVGGGPAGGGGGNKSAGGGGAPPPGVSCYLGA 53
Score = 32.7 bits (71), Expect = 0.52
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGGXXVXPPXCFLAA 925
GGGG G F G GGG GGGG GG + ++ A
Sbjct: 310 GGGGAGAQSAYF-GVGGGPVGGGGGGAKSGGGGGGIPGQSVYMGA 353
Score = 30.3 bits (65), Expect = 2.8
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 1059 GGGGXGXP-XXXFXGWGGGXXXGGGG 985
GGGG G P + G GGG GGGG
Sbjct: 338 GGGGGGIPGQSVYMGAGGGGGGGGGG 363
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 32.7 bits (71), Expect = 0.52
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGGXXVXPPXCFLAA 925
GGGG G F G GGG GGGG GG + ++ A
Sbjct: 204 GGGGAGAQSAYF-GVGGGPVGGGGGGAKSGGGGGGIPGQSVYMGA 247
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 32.7 bits (71), Expect = 0.52
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGG 985
GGGG G F G GGG GGGG
Sbjct: 62 GGGGFGGGNGGFGGGGGGSGGGGGG 86
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGG 985
GGGG G F G GG GGGG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGG 79
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical protein
C56A3.1 protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.91
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGGXXVXP 946
GGGG G G GGG GGGG GG P
Sbjct: 110 GGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAP 147
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 96 GGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGG 128
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 98 GGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGG 130
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 31.5 bits (68), Expect = 1.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 1119 PXXXPPPXPPXPPXPXPXQP 1178
P PPP PP PP P P P
Sbjct: 354 PPAPPPPPPPPPPPPPPQTP 373
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
G GG G P G GG GG G PPP GG
Sbjct: 176 GHGGMGGPPGH-GGQGGPPGHGGMGGPPPGQGG 207
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
G GG G P G GG GG G PPP GG
Sbjct: 456 GHGGMGGPPGH-GGQGGPPGHGGMGGPPPGQGG 487
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 886 NPPGX-PPPXPPXXGGQKTXGGPHTXPPXXG 975
+PPG PPP PP Q+ PH PP G
Sbjct: 461 SPPGAVPPPPPPQQQHQQQQHPPHHAPPHVG 491
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 886 NPPGX-PPPXPPXXGGQKTXGGPHTXPPXXG 975
+PPG PPP PP Q+ PH PP G
Sbjct: 786 SPPGAVPPPPPPQQQHQQQQHPPHHAPPHVG 816
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 886 NPPGX-PPPXPPXXGGQKTXGGPHTXPPXXG 975
+PPG PPP PP Q+ PH PP G
Sbjct: 786 SPPGAVPPPPPPQQQHQQQQHPPHHAPPHVG 816
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 106 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGG P GG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGG 189
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGG PPP G
Sbjct: 26 GGGGGGGGCGG--GCGGGCGGGGGCAPPPAPCG 56
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGG 981
PP PPP PP + GG ++ GGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGW---GGGXXXGGGGXPPP 973
GGGG P G GGG GGGG PP
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G GGG GGGG GG
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGG 230
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 1119 PXXXPPPXPPXPPXPXP 1169
P PPP PP PP P P
Sbjct: 298 PAAAPPPPPPPPPPPAP 314
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G GGG GGGG GG
Sbjct: 177 GGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGG 209
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 106 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGG 138
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGG P GG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGG 189
Score = 30.3 bits (65), Expect = 2.8
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGG PPP G
Sbjct: 26 GGGGGGGGCGG--GCGGGCGGGGGCAPPPAPCG 56
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGG 981
PP PPP PP + GG ++ GGG
Sbjct: 302 PPPPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGW---GGGXXXGGGGXPPP 973
GGGG P G GGG GGGG PP
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G GGG GGGG GG
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGG 230
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 1119 PXXXPPPXPPXPPXPXP 1169
P PPP PP PP P P
Sbjct: 298 PAAAPPPPPPPPPPPAP 314
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G GGG GGGG GG
Sbjct: 177 GGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGG 209
>U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical protein
F12A10.7 protein.
Length = 113
Score = 30.7 bits (66), Expect = 2.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GG G G P + G+GGG G GG GG
Sbjct: 51 GGWGGGYPYGGYGGYGGGYGGGYGGGYGGGYGG 83
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 24.6 bits (51), Expect(2) = 2.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 1119 PXXXPPPXPPXPP 1157
P PPP PP PP
Sbjct: 605 PHAVPPPPPPPPP 617
Score = 24.2 bits (50), Expect(2) = 2.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 1131 PPPXPPXPPXPXP 1169
PPP PP PP P
Sbjct: 630 PPPPPPPPPMGLP 642
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 24.6 bits (51), Expect(2) = 2.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 1119 PXXXPPPXPPXPP 1157
P PPP PP PP
Sbjct: 431 PHAVPPPPPPPPP 443
Score = 24.2 bits (50), Expect(2) = 2.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 1131 PPPXPPXPPXPXP 1169
PPP PP PP P
Sbjct: 456 PPPPPPPPPMGLP 468
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGGG GG
Sbjct: 85 GGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGG 117
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.3 bits (65), Expect = 2.8
Identities = 23/86 (26%), Positives = 25/86 (29%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPPFXX 1068
PPG PP GQ+ GGP PP G + P PPPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGP--PPPGQPYGPPGGYPPQQQRPPYQAQP-YPGPPPPQQQ 729
Query: 1069 XXXXXXXXXXXXXXXXXPXXXXPPPP 1146
P PPPP
Sbjct: 730 RGYGYPPPPQPGHPYQQPYGQMPPPP 755
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein
protein.
Length = 789
Score = 30.3 bits (65), Expect = 2.8
Identities = 23/86 (26%), Positives = 25/86 (29%)
Frame = +1
Query: 889 PPGXPPPXPPXXGGQKTXGGPHTXPPXXGGGXXXXXXXXXXXXTXKXPXGXPXPPPPFXX 1068
PPG PP GQ+ GGP PP G + P PPPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGP--PPPGQPYGPPGGYPPQQQRPPYQAQP-YPGPPPPQQQ 729
Query: 1069 XXXXXXXXXXXXXXXXXPXXXXPPPP 1146
P PPPP
Sbjct: 730 RGYGYPPPPQPGHPYQQPYGQMPPPP 755
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein
R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 3.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 1131 PPPXPPXPPXPXPXQP 1178
PPP PP PP P P P
Sbjct: 2 PPPPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein
R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 3.7
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 1131 PPPXPPXPPXPXPXQP 1178
PPP PP PP P P P
Sbjct: 2 PPPPPPPPPPPPPPPP 17
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 1174 WXGXGXGGXGGXGGGXXXGXW 1112
+ G G GG GG GGG G W
Sbjct: 203 YGGPGGGGQGGYGGGNYGGGW 223
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 1174 WXGXGXGGXGGXGGGXXXGXW 1112
+ G G GG GG GGG G W
Sbjct: 241 YGGPGGGGQGGYGGGNYGGGW 261
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical protein
T19A5.3a protein.
Length = 715
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/40 (45%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGG-XPPPXXGGXXVXPP 943
GGGG G F G GGG GGGG GG PP
Sbjct: 481 GGGGGGG---GFGGGGGGFGGGGGGFGSGSPFGGAAPSPP 517
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 1131 PPPXPPXPPXPXPXQ 1175
PPP PP PP P P Q
Sbjct: 136 PPPSPPPPPPPPPPQ 150
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 1131 PPPXPPXPPXPXPXQ 1175
PPP PP PP P P Q
Sbjct: 84 PPPPPPPPPQPAPAQ 98
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical protein
W01G7.1 protein.
Length = 627
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 1131 PPPXPPXPPXPXPXQP 1178
PPP PP P P P QP
Sbjct: 518 PPPPPPPKPKPAPVQP 533
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GGGG G G GGG GGG GG
Sbjct: 790 GGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGG 822
>U28731-7|AAA68294.2| 120|Caenorhabditis elegans Hypothetical protein
F12A10.1 protein.
Length = 120
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 1059 GGGGXGXPXXXFXGWGGGXXXGGGGXPPPXXGG 961
GG G G P G+ GG GGG P GG
Sbjct: 57 GGWGGGYPGGYGGGYPGGYSGYGGGYPGMYGGG 89
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 29.1 bits (62), Expect = 6.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 1131 PPPXPPXPPXPXPXQP 1178
PPP PP P P P QP
Sbjct: 518 PPPPPPPKPKPAPVQP 533
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,264,504
Number of Sequences: 27780
Number of extensions: 218637
Number of successful extensions: 2785
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2156
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3224247522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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