Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E17
(995 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.047
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.25
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.33
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.77
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 2.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 7.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 9.5
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.004
Identities = 38/178 (21%), Positives = 44/178 (24%), Gaps = 1/178 (0%)
Frame = +3
Query: 372 PPPPLXRXQNSRXXPXXTXXCPXXXXX-PXPPPPHXLPQXLXXXNXXXLIXXNXFPXXPL 548
PP P+ P T P P PPP P + + P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS----EIPSIPAPSGAPPVPA 1087
Query: 549 XQXPAKXPNPXXXLNXTXSXXXXXXPXXXPPXXXXPPPPXDXXXXSLXPXXSXSXPXAXP 728
P P P P PP P P S + P P
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA--PPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 729 XXXHPTNXRPSXXXXXPPPRTSPPPXXXXPPXFXPXPXXXPXVPPSSSXXXSPXFTXP 902
P PS P P + PP P P VPP +P P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 33.9 bits (74), Expect = 0.036
Identities = 19/80 (23%), Positives = 23/80 (28%)
Frame = +3
Query: 624 PXXXPPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTSPPP 803
P P PP P P + P P P +PS PP ++ PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 804 XXXXPPXFXPXPXXXPXVPP 863
P P PP
Sbjct: 1219 VPTPSAGLPPVPVPTAKAPP 1238
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/87 (24%), Positives = 23/87 (26%)
Frame = +3
Query: 624 PXXXPPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTSPPP 803
P P PP P P S + P P P PS P P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 804 XXXXPPXFXPXPXXXPXVPPSSSXXXS 884
P P P S+ S
Sbjct: 1229 VPVPTAKAPPVPAPSSEAPSVSTPRSS 1255
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/83 (25%), Positives = 25/83 (30%)
Frame = +3
Query: 636 PPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTSPPPXXXX 815
PP PP P P S + P P P P+ P +S P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVST 1251
Query: 816 PPXFXPXPXXXPXVPPSSSXXXS 884
P P P P+SS S
Sbjct: 1252 PRSSVPSPHSNASPSPTSSSMAS 1274
Score = 29.5 bits (63), Expect = 0.77
Identities = 21/89 (23%), Positives = 24/89 (26%)
Frame = +3
Query: 636 PPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTSPPPXXXX 815
P PP P P S + P P P PS P + P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 816 PPXFXPXPXXXPXVPPSSSXXXSPXFTXP 902
P P P VPP +P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.5 bits (58), Expect = 3.1
Identities = 29/150 (19%), Positives = 39/150 (26%), Gaps = 4/150 (2%)
Frame = +3
Query: 435 PXXXXXPXPPPPHXLPQXLXXXNXXXLIXXNXFPXXPLXQXPAKXPNPXXXLNXTXSXXX 614
P P P P +P + P+ P P +
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 615 XXXPXXXPPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTS 794
P P PP P + + P P P +P+ PP +
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 795 PP----PXXXXPPXFXPXPXXXPXVPPSSS 872
P P PP P P P VP S+
Sbjct: 1197 APPVPKPSVGVPP--VPPPSTAPPVPTPSA 1224
Score = 27.1 bits (57), Expect = 4.1
Identities = 36/169 (21%), Positives = 48/169 (28%), Gaps = 5/169 (2%)
Frame = +3
Query: 378 PPLXRXQNSRXXPXXTXXCPXXXXXPXPPPPHXLPQXLXXXNXXXLIXXNXFPXXPLXQX 557
PP+ ++ P + P P P P +P + + P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPP-PVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 558 PAKXPNPXXXLNXTXSXXXXXXPXXXPPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPXXX 737
A P P + P P PP P + P S + P
Sbjct: 1100 AAP-PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV-PKPSVAAPPVPAPSG 1157
Query: 738 HPTNXRPSXXXXX-PPPRTS----PPPXXXXPPXFXPXPXXXPXVPPSS 869
P +PS P P + P P PP P P P VP S
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP--VPPPSEAPPVPKPS 1204
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.047
Identities = 37/164 (22%), Positives = 45/164 (27%)
Frame = +3
Query: 372 PPPPLXRXQNSRXXPXXTXXCPXXXXXPXPPPPHXLPQXLXXXNXXXLIXXNXFPXXPLX 551
PPPP + +R P P PPPP N I P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR--------SNAAGSI-----PLPPQG 357
Query: 552 QXPAKXPNPXXXLNXTXSXXXXXXPXXXPPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPX 731
+ A P P T PPP P + + P
Sbjct: 358 R-SAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Query: 732 XXHPTNXRPSXXXXXPPPRTSPPPXXXXPPXFXPXPXXXPXVPP 863
P + PS PP ++PP P P P P PP
Sbjct: 417 VPTPPSLPPSAPPSLPP--SAPPSLPMGAPAAPPLPPSAPIAPP 458
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.25
Identities = 18/76 (23%), Positives = 20/76 (26%)
Frame = +3
Query: 636 PPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTSPPPXXXX 815
PP PP P S P P P + PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 816 PPXFXPXPXXXPXVPP 863
PP P P +PP
Sbjct: 184 PPSAPSLPSAVPPMPP 199
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = +3
Query: 624 PXXXPPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTSPPP 803
P PP PPP P + S P A P P P P TS P
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPM--PPKVPPPPLSQAPVANTSSRP 218
Query: 804 XXXXPP 821
PP
Sbjct: 219 SSFAPP 224
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/68 (23%), Positives = 22/68 (32%)
Frame = +3
Query: 684 SLXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTSPPPXXXXPPXFXPXPXXXPXVPP 863
S P + + P PT+ P P P ++PP PP P P
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Query: 864 SSSXXXSP 887
S +P
Sbjct: 181 VKSPPSAP 188
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.33
Identities = 18/62 (29%), Positives = 22/62 (35%)
Frame = +3
Query: 687 LXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTSPPPXXXXPPXFXPXPXXXPXVPPS 866
+ P S P P P S PPP + PPP P P P +P S
Sbjct: 1681 MAPAHPVSTPPVRPQSAAPPQM--SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Query: 867 SS 872
S+
Sbjct: 1739 SA 1740
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 777 PPPRTSPPPXXXXPPXFXPXPXXXPXVPPSSSXXXSP 887
PPP S PP PP P P P+SS P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.77
Identities = 27/141 (19%), Positives = 33/141 (23%)
Frame = +3
Query: 360 GXXTPPPPLXRXQNSRXXPXXTXXCPXXXXXPXPPPPHXLPQXLXXXNXXXLIXXNXFPX 539
G PPPP+ P P PPP H P P
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHM--PPPPMHHEPGEHMPPPPMHHEPGEHMPP 261
Query: 540 XPLXQXPAKXPNPXXXLNXTXSXXXXXXPXXXPPXXXXPPPPXDXXXXSLXPXXSXSXPX 719
P+ P + P ++ P P PPPP P
Sbjct: 262 PPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Query: 720 AXPXXXHPTNXRPSXXXXXPP 782
P + P PP
Sbjct: 321 GEHMPPPPMHHEPGEHMPPPP 341
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +1
Query: 634 LPLXXXPPPPPXIXXXXPWXPXXPXLXXXPXXXXXTQQMXAPXXXXLXPRPGHXPPP 804
L L PPPPP + P P P P P P PPP
Sbjct: 727 LLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 780 PPRTSPPPXXXXPPXFXPXPXXXPXVPP 863
PP PPP PP F P P PP
Sbjct: 5 PPGNPPPPPP--PPGFEPPSQPPPPPPP 30
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 9.5
Identities = 22/91 (24%), Positives = 27/91 (29%)
Frame = +3
Query: 624 PXXXPPXXXXPPPPXDXXXXSLXPXXSXSXPXAXPXXXHPTNXRPSXXXXXPPPRTSPPP 803
P P P PP S + S P P+ PS PP + PP
Sbjct: 1011 PPKQPANRVVPLPPTASQRASAYEPPTVSVPS-------PSALSPSVTPQLPPVSSRLPP 1063
Query: 804 XXXXPPXFXPXPXXXPXVPPSSSXXXSPXFT 896
P P +P SS+ P T
Sbjct: 1064 VSATRPQIPQPPPVSTALPSSSAVSRPPIAT 1094
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,494,151
Number of Sequences: 5004
Number of extensions: 16009
Number of successful extensions: 105
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 515273988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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