Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E16
         (1185 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0809 + 6294991-6295044,6295099-6296334                           36   0.062
01_05_0781 + 25140652-25142010                                         31   2.3  
11_04_0228 + 15105752-15105921,15106774-15106919,15107369-151074...    30   4.1  
11_04_0224 + 15059904-15059910,15059955-15060185,15060345-150604...    30   4.1  

>01_01_0809 + 6294991-6295044,6295099-6296334
          Length = 429

 Score = 35.9 bits (79), Expect = 0.062
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 804 KGGPGASSLTSLFNEIGPYXGHS*REFIALPPHGGLQNHSPG-WFIDNP 947
           +GGPG S LT  F E+GPY  +   + ++L P+    N   G  FIDNP
Sbjct: 61  QGGPGCSGLTGNFFELGPYFVN--HDALSLSPNPFAWNRRFGLLFIDNP 107


>01_05_0781 + 25140652-25142010
          Length = 452

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 804 KGGPGASSLTSLFNEIGPY 860
           +GGPG SSL   F E+GPY
Sbjct: 80  QGGPGCSSLIGSFAELGPY 98


>11_04_0228 +
           15105752-15105921,15106774-15106919,15107369-15107448,
           15107598-15107720,15107814-15107906
          Length = 203

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 807 GGPGASSLTSLFNEIGPY 860
           GGPG SS++ L +EIGP+
Sbjct: 91  GGPGCSSISGLAHEIGPF 108


>11_04_0224 +
           15059904-15059910,15059955-15060185,15060345-15060424,
           15060497-15060547,15060548-15060670,15062151-15062184,
           15062363-15062441,15062779-15062848,15075787-15075889,
           15076247-15076284,15076449-15076550,15077027-15077107,
           15077506-15077657,15077731-15077857,15078193-15078311,
           15078636-15078749,15079001-15079214
          Length = 574

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 807 GGPGASSLTSLFNEIGPY 860
           GGPG SS++ L +EIGP+
Sbjct: 65  GGPGCSSISGLTHEIGPF 82


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,440,686
Number of Sequences: 37544
Number of extensions: 494604
Number of successful extensions: 818
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3608292120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)