Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E16
         (1185 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052022-1|AAK93446.1|  482|Drosophila melanogaster LD47549p pro...    33   1.0  
AE014297-2717|AAN13813.1|  482|Drosophila melanogaster CG4572-PC...    33   1.0  
AE014297-2716|AAN13812.1|  482|Drosophila melanogaster CG4572-PB...    33   1.0  
AE014297-2715|AAF55705.1|  482|Drosophila melanogaster CG4572-PA...    33   1.0  

>AY052022-1|AAK93446.1|  482|Drosophila melanogaster LD47549p
           protein.
          Length = 482

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
 Frame = +3

Query: 804 KGGPGASSLTSLFNEIGPYXGHS*REFIALPPHGGLQNHSPGW-------FIDNP 947
           +GGPGASSL  LF E GP         + L  HG LQ  +  W       +IDNP
Sbjct: 122 QGGPGASSLFGLFTENGP---------LELDGHGKLQKRNYTWSKTHNLIYIDNP 167


>AE014297-2717|AAN13813.1|  482|Drosophila melanogaster CG4572-PC,
           isoform C protein.
          Length = 482

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
 Frame = +3

Query: 804 KGGPGASSLTSLFNEIGPYXGHS*REFIALPPHGGLQNHSPGW-------FIDNP 947
           +GGPGASSL  LF E GP         + L  HG LQ  +  W       +IDNP
Sbjct: 122 QGGPGASSLFGLFTENGP---------LELDGHGKLQKRNYTWSKTHNLIYIDNP 167


>AE014297-2716|AAN13812.1|  482|Drosophila melanogaster CG4572-PB,
           isoform B protein.
          Length = 482

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
 Frame = +3

Query: 804 KGGPGASSLTSLFNEIGPYXGHS*REFIALPPHGGLQNHSPGW-------FIDNP 947
           +GGPGASSL  LF E GP         + L  HG LQ  +  W       +IDNP
Sbjct: 122 QGGPGASSLFGLFTENGP---------LELDGHGKLQKRNYTWSKTHNLIYIDNP 167


>AE014297-2715|AAF55705.1|  482|Drosophila melanogaster CG4572-PA,
           isoform A protein.
          Length = 482

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
 Frame = +3

Query: 804 KGGPGASSLTSLFNEIGPYXGHS*REFIALPPHGGLQNHSPGW-------FIDNP 947
           +GGPGASSL  LF E GP         + L  HG LQ  +  W       +IDNP
Sbjct: 122 QGGPGASSLFGLFTENGP---------LELDGHGKLQKRNYTWSKTHNLIYIDNP 167


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,013,097
Number of Sequences: 53049
Number of extensions: 834822
Number of successful extensions: 1516
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6291255432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)