Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E16
(1185 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical pr... 33 0.39
U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z81037-8|CAI79129.1| 217|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 30 2.8
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical pr... 29 4.9
U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical pr... 29 4.9
>U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical
protein F41C3.5 protein.
Length = 469
Score = 33.1 bits (72), Expect = 0.39
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG SSL L NE+GPY
Sbjct: 68 GGPGCSSLDGLLNEMGPY 85
>U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical
protein F32A5.3 protein.
Length = 574
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG SSL LF E+GP+
Sbjct: 75 GGPGCSSLGGLFEELGPF 92
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG+SSL LF E GP+
Sbjct: 1599 GGPGSSSLMGLFEENGPF 1616
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG SSL F E+GP+
Sbjct: 1078 GGPGCSSLGGFFTELGPF 1095
>Z81037-8|CAI79129.1| 217|Caenorhabditis elegans Hypothetical
protein C17E4.11 protein.
Length = 217
Score = 30.3 bits (65), Expect = 2.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 20 PNLHLISXKIPLLKNFEXTSTATSFQKATIXXVLWPWFSGW 142
PN+ IS I L N E +S F+KATI +L S W
Sbjct: 86 PNMEWISDDITTLINCESSSFDVVFEKATIEAILVTEKSAW 126
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG+SSL LF E GP+
Sbjct: 1599 GGPGSSSLMGLFEENGPF 1616
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG SSL F E+GP+
Sbjct: 1078 GGPGCSSLGGFFTELGPF 1095
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG+SSL LF E GP+
Sbjct: 1599 GGPGSSSLMGLFEENGPF 1616
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG SSL F E+GP+
Sbjct: 1078 GGPGCSSLGGFFTELGPF 1095
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 804 KGGPGASSLTSLFNEIGPY 860
+GGPG +S LF+EIGP+
Sbjct: 1716 QGGPGCASTGGLFSEIGPF 1734
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG SSL L +E GPY
Sbjct: 78 GGPGCSSLLGLLSENGPY 95
>Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical
protein C08H9.1 protein.
Length = 505
Score = 29.5 bits (63), Expect = 4.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGP 857
GGPG SSL++ F E GP
Sbjct: 75 GGPGCSSLSAFFEEFGP 91
>U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical
protein K10B2.2a protein.
Length = 470
Score = 29.5 bits (63), Expect = 4.9
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 807 GGPGASSLTSLFNEIGPY 860
GGPG SSL L E+GP+
Sbjct: 75 GGPGCSSLDGLIEELGPF 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,410,907
Number of Sequences: 27780
Number of extensions: 416447
Number of successful extensions: 988
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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