Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E16
         (1185 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   5.3  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   5.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   5.3  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   9.2  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 940 SMNHPGE*FCNPPCGGKAINSLY 872
           +M H    FC P CG   IN  +
Sbjct: 36  TMTHTTNAFCLPFCGPNVINPFF 58


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 940 SMNHPGE*FCNPPCGGKAINSLY 872
           +M H    FC P CG   IN  +
Sbjct: 35  TMTHTTNAFCLPFCGPNVINPFF 57


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
            channel variant 1 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 1036 KXQGGDPYVSHNHVHXHXR 980
            K Q  + Y SH H+  H R
Sbjct: 116  KNQNNNHYTSHQHLRTHLR 134


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 777 KDTVX*SGCKGGPGASSLTSLFNEIGPY 860
           ++TV  +GC  GP    L S   E  PY
Sbjct: 399 QETVDPAGCNAGPAKYYLKSRDPERTPY 426


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,935
Number of Sequences: 438
Number of extensions: 6566
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40367835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)