Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E15
         (854 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              24   1.6  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   3.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   4.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   4.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.7  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   6.3  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    22   8.3  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = +1

Query: 406 VSDNEI---SSKFVKLFRGLKDVKDLINE 483
           +SD +I   SSK +K F   K +K+++NE
Sbjct: 107 ISDADIHLKSSKLIKCFAKYKTLKEIMNE 135


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 349 ECGAVGHCTATVWEK 393
           E G +GHCTA+V ++
Sbjct: 310 ERGELGHCTASVMDE 324


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 415 NEISSKFVKLFRGLKDVKDL 474
           N+I   +V  F+G+ DVKD+
Sbjct: 278 NDILRPYVPEFKGVLDVKDV 297


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 415 NEISSKFVKLFRGLKDVKDL 474
           N+I   +V  F+G+ DVKD+
Sbjct: 193 NDILRPYVPEFKGVLDVKDV 212


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 415 NEISSKFVKLFRGLKDVKDL 474
           N+I   +V  F+G+ DVKD+
Sbjct: 512 NDILRPYVPEFKGVLDVKDV 531


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -3

Query: 750 TPSTTGFSKELI-FMLDRHVGAFLVQ 676
           T S   +S  L+ F L RH+G FL+Q
Sbjct: 194 TLSHAEYSMLLVYFHLQRHMGNFLIQ 219


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 723 ELIFMLDRHVGAFLVQ 676
           ++ F L RH G FL+Q
Sbjct: 235 QVSFNLQRHTGYFLIQ 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,586
Number of Sequences: 438
Number of extensions: 6259
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)