Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E14
         (828 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1680 - 39123536-39123628,39123726-39123821,39123941-391240...    36   0.030
12_01_0326 - 2520743-2520926,2521019-2521107,2522039-2522500           31   0.85 

>01_06_1680 -
           39123536-39123628,39123726-39123821,39123941-39124093,
           39124273-39124382,39124601-39124757,39124867-39124877,
           39125138-39125228,39125401-39125496,39125605-39125724,
           39125914-39125978,39126066-39126168,39126406-39126631,
           39126714-39126790
          Length = 465

 Score = 36.3 bits (80), Expect = 0.030
 Identities = 23/68 (33%), Positives = 34/68 (50%)
 Frame = +1

Query: 361 SVEGVPLANIPHDWADYEPDNAGDNENCILMNPDGNFADVNCTETFQYVCYKKKTSTVAM 540
           S+ G  L   P D+ D EPD   ++ + I+     N  D  C    + +C++KK  TV  
Sbjct: 347 SIYGKQLMIDPQDFQDAEPDILANSASEIINRIKEN--DDQCAMALRSLCHRKKGLTVEE 404

Query: 541 ASCGSVDS 564
           AS  S+DS
Sbjct: 405 ASLISIDS 412


>12_01_0326 - 2520743-2520926,2521019-2521107,2522039-2522500
          Length = 244

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 9/160 (5%)
 Frame = +1

Query: 259 DDALKSGMLSLIKNKTSCGIFT----GIHATFSKGDYRS--VEGVPLANIPHDWADYEPD 420
           DD  +S   S+++  TS G +T    G HAT+S  DY+S  +  V +  +      Y   
Sbjct: 73  DDDGRSSPPSVVEYGTSPGEYTASATGDHATYSYSDYKSGAIHHVTIGPLEPATTYYYRC 132

Query: 421 NAGDNENCILMNPDGNFADVNCTETFQYVCYKKKTSTVAMASCGSVD---SEYVLSKDTG 591
            AG+ E   L  P         T  +      +    + +   G+VD    +++   +  
Sbjct: 133 GAGEEEELSLRTPPAKLPVEFVTRIYDNEANSQGPMYITIGDGGNVDGHSDKFIEDHELA 192

Query: 592 NCYKFHKVPRTWSRAYMACSAEGGYLTIINNDKEAAFLRD 711
           +  +F ++     R  +    +  + T   ND + A +RD
Sbjct: 193 HLSEFREMSFGHGRLRIVSETKAIW-TWHRNDDQHATVRD 231


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,887,111
Number of Sequences: 37544
Number of extensions: 462929
Number of successful extensions: 995
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)