Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E12
         (884 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ176868-1|AAZ85145.1| 1208|Homo sapiens RecQ protein-like 4 pro...    32   3.2  
AB026546-1|BAA86899.1| 1208|Homo sapiens RECQL4 helicase protein.      32   3.2  
AB006532-1|BAA74453.1| 1208|Homo sapiens DNA helicase protein.         32   3.2  
U58856-1|AAC51365.1|  401|Homo sapiens unknown protein.                30   9.7  
BX119957-15|CAM25919.1|  315|Homo sapiens chromosome 6 open read...    30   9.7  
AL845353-11|CAI41879.1|  315|Homo sapiens chromosome 6 open read...    30   9.7  
AL732442-9|CAI17758.1|  315|Homo sapiens chromosome 6 open readi...    30   9.7  
AL662800-20|CAI18172.2|  315|Homo sapiens chromosome 6 open read...    30   9.7  
AL662798-6|CAI18250.2|  315|Homo sapiens chromosome 6 open readi...    30   9.7  
AK127564-1|BAC87037.1|  315|Homo sapiens protein ( Homo sapiens ...    30   9.7  

>DQ176868-1|AAZ85145.1| 1208|Homo sapiens RecQ protein-like 4
           protein.
          Length = 1208

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 22/74 (29%), Positives = 29/74 (39%)
 Frame = +3

Query: 507 PRCWRFSIGSAPLTSIXKIDXQVRGGXTPTGL*RYQAFPPGKLPSVPLSCSRTWPLYPHT 686
           PRCW   +  A   S      + R G  P    R +A   G L + P    R WPL   +
Sbjct: 75  PRCWGPHLNRAATKSPQPTPGRSRQGSVPDYGQRLKANLKGTLQAGPALGRRPWPLGRAS 134

Query: 687 WSXLSPLPGKRGPL 728
               +P P   GP+
Sbjct: 135 SKASTPKPPGTGPV 148


>AB026546-1|BAA86899.1| 1208|Homo sapiens RECQL4 helicase protein.
          Length = 1208

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 22/74 (29%), Positives = 29/74 (39%)
 Frame = +3

Query: 507 PRCWRFSIGSAPLTSIXKIDXQVRGGXTPTGL*RYQAFPPGKLPSVPLSCSRTWPLYPHT 686
           PRCW   +  A   S      + R G  P    R +A   G L + P    R WPL   +
Sbjct: 75  PRCWGPHLNRAATKSPQPTPGRSRQGSVPDYGQRLKANLKGTLQAGPALGRRPWPLGRAS 134

Query: 687 WSXLSPLPGKRGPL 728
               +P P   GP+
Sbjct: 135 SKASTPKPPGTGPV 148


>AB006532-1|BAA74453.1| 1208|Homo sapiens DNA helicase protein.
          Length = 1208

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 22/74 (29%), Positives = 29/74 (39%)
 Frame = +3

Query: 507 PRCWRFSIGSAPLTSIXKIDXQVRGGXTPTGL*RYQAFPPGKLPSVPLSCSRTWPLYPHT 686
           PRCW   +  A   S      + R G  P    R +A   G L + P    R WPL   +
Sbjct: 75  PRCWGPHLNRAATKSPQPTPGRSRQGSVPDYGQRLKANLKGTLQAGPALGRRPWPLGRAS 134

Query: 687 WSXLSPLPGKRGPL 728
               +P P   GP+
Sbjct: 135 SKASTPKPPGTGPV 148


>U58856-1|AAC51365.1|  401|Homo sapiens unknown protein.
          Length = 401

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 20/45 (44%), Positives = 23/45 (51%)
 Frame = +3

Query: 591 PTGL*RYQAFPPGKLPSVPLSCSRTWPLYPHTWSXLSPLPGKRGP 725
           P+G      FPPG L SVPL+     PL P     L PLP + GP
Sbjct: 351 PSGRSVVSLFPPGSLSSVPLT---LLPLAP----SLPPLPSEPGP 388


>BX119957-15|CAM25919.1|  315|Homo sapiens chromosome 6 open reading
           frame 136 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
 Frame = +3

Query: 609 YQAFP-----PGKLPSVPL---SCSRTWPLYPHTWSXLSP-LPGKRGPLLIPHPV 746
           YQA P     PG LP  PL   S + T P  P  WS L P LP +R P + P P+
Sbjct: 19  YQARPQDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPL 73


>AL845353-11|CAI41879.1|  315|Homo sapiens chromosome 6 open reading
           frame 136 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
 Frame = +3

Query: 609 YQAFP-----PGKLPSVPL---SCSRTWPLYPHTWSXLSP-LPGKRGPLLIPHPV 746
           YQA P     PG LP  PL   S + T P  P  WS L P LP +R P + P P+
Sbjct: 19  YQARPQDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPL 73


>AL732442-9|CAI17758.1|  315|Homo sapiens chromosome 6 open reading
           frame 136 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
 Frame = +3

Query: 609 YQAFP-----PGKLPSVPL---SCSRTWPLYPHTWSXLSP-LPGKRGPLLIPHPV 746
           YQA P     PG LP  PL   S + T P  P  WS L P LP +R P + P P+
Sbjct: 19  YQARPQDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPL 73


>AL662800-20|CAI18172.2|  315|Homo sapiens chromosome 6 open reading
           frame 136 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
 Frame = +3

Query: 609 YQAFP-----PGKLPSVPL---SCSRTWPLYPHTWSXLSP-LPGKRGPLLIPHPV 746
           YQA P     PG LP  PL   S + T P  P  WS L P LP +R P + P P+
Sbjct: 19  YQARPQDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPL 73


>AL662798-6|CAI18250.2|  315|Homo sapiens chromosome 6 open reading
           frame 136 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
 Frame = +3

Query: 609 YQAFP-----PGKLPSVPL---SCSRTWPLYPHTWSXLSP-LPGKRGPLLIPHPV 746
           YQA P     PG LP  PL   S + T P  P  WS L P LP +R P + P P+
Sbjct: 19  YQARPQDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPL 73


>AK127564-1|BAC87037.1|  315|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45657 fis, clone CTONG2014959. ).
          Length = 315

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
 Frame = +3

Query: 609 YQAFP-----PGKLPSVPL---SCSRTWPLYPHTWSXLSP-LPGKRGPLLIPHPV 746
           YQA P     PG LP  PL   S + T P  P  WS L P LP +R P + P P+
Sbjct: 19  YQARPQDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLPTQRLPQVPPLPL 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,845,504
Number of Sequences: 237096
Number of extensions: 2252968
Number of successful extensions: 6652
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6645
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)