Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E11
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 97 2e-20
01_06_0663 - 30991390-30992340 83 4e-16
05_07_0134 - 27911920-27912762 63 3e-10
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 61 1e-09
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 54 1e-07
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 50 3e-06
06_01_0080 + 644021-645463 37 0.025
04_01_0035 - 433848-434372,434905-435381 31 1.6
06_03_0219 - 18227559-18227858,18227864-18228340 29 3.7
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 29 3.7
02_01_0384 - 2781362-2782299,2782320-2782428 29 3.7
06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216 29 6.5
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 28 8.6
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 28 8.6
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 96.7 bits (230), Expect = 2e-20
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Frame = +3
Query: 222 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 401
MA NLV G+ V +D +++ + + +G+ S ++L S+ VLDVY
Sbjct: 1 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 60
Query: 402 LGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQIFP----IALEKGLGFT------DAPVSG 545
G++G++A+ G L IDSST+DP ++I L++ + DAPVSG
Sbjct: 61 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 120
Query: 546 GVMGAQNATLAFMXGGRKEDFXRSLPLLKVMGAKQFHCGQIXSGQVAKLTNNMLMGITRN 725
GV A+ L FM GG +E + + PLL MG K +CG +G VAK+ NNM M I+
Sbjct: 121 GVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISML 180
Query: 726 GYS 734
G S
Sbjct: 181 GVS 183
>01_06_0663 - 30991390-30992340
Length = 316
Score = 82.6 bits (195), Expect = 4e-16
Identities = 61/192 (31%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Frame = +3
Query: 156 RAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXX 335
R S +T + VA++G G MG MA +L+ G+ + Y+ + G T A S
Sbjct: 13 RPISPDTTR-VAWVGTGVMGQSMAGHLLAAGYALTVYNRTASKAEGLVSRGATLAESPRA 71
Query: 336 XXXXXXXXXSILTSNKVVLDVYLGKD-GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEK 512
++ V L G +A G LL+D +T DP + +I A K
Sbjct: 72 AAAAADVIFLMVGFPSDVRSTSLDPSTGALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAK 131
Query: 513 GLGFTDAPVSGGVMGAQNATLAFMXGGRKEDFXRSLPLLKVMGAKQFHCGQIXSGQVAKL 692
DAPVSGG GA++ATL+ GG R PL K+MG + G +GQ AKL
Sbjct: 132 SCAAVDAPVSGGDRGARSATLSIFAGGDAAVVARLAPLFKLMG-NALYMGGPGAGQRAKL 190
Query: 693 TNNMLMGITRNG 728
N + + T G
Sbjct: 191 GNQIAIASTMVG 202
>05_07_0134 - 27911920-27912762
Length = 280
Score = 62.9 bits (146), Expect = 3e-10
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Frame = +3
Query: 222 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 401
MAA L+ GF V Y + A G + A S +++ + V V
Sbjct: 1 MAARLLAAGFAVTAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVV 60
Query: 402 L-GKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLA 578
L GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA++ LA
Sbjct: 61 LDAASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALA 120
Query: 579 FMXGGRKEDFXRSLPLLKVMGAKQFHCGQIXSGQVAKLTNNM 704
+ GG + PL +G + + G SGQ +K+ N +
Sbjct: 121 LLAGGDEAVVSWLAPLFAHLG-RPTYMGPPGSGQSSKIANQI 161
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 61.3 bits (142), Expect = 1e-09
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Frame = +3
Query: 126 STQCLYTAARRA----YSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNA 293
++Q +Y A++ A + T K + F+GLG MG MA++L+K GF+V YD K L
Sbjct: 302 ASQQIYDASKLADQLVMACKTAKTIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLAR 361
Query: 294 AAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLD-VYLGKDGVVAHAKKGSLLIDSSTID 470
G +S I+ +N+V + V G G V+ G+ +I SST+
Sbjct: 362 FTDLGGLTKDS-PEEVSKDVEILVIMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVS 420
Query: 471 PN-VPKQIFPIALE-KGLGFTDAPVSGGVMGAQNATL 575
P V K + E + + DAPVSGGV A TL
Sbjct: 421 PGFVIKLKERLEAECRDIKLVDAPVSGGVKRAAEGTL 457
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 54.4 bits (125), Expect = 1e-07
Identities = 28/76 (36%), Positives = 39/76 (51%)
Frame = +3
Query: 507 EKGLGFTDAPVSGGVMGAQNATLAFMXGGRKEDFXRSLPLLKVMGAKQFHCGQIXSGQVA 686
+KG F +APVSG A++ L + G K + +P V+G K F G+I +G
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKM 169
Query: 687 KLTNNMLMGITRNGYS 734
KL NM+MG N S
Sbjct: 170 KLVVNMIMGSMMNALS 185
Score = 33.9 bits (74), Expect(2) = 0.002
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +3
Query: 186 VAFLGLGNMGGFMAANLVKKGFTV 257
V FLGLG MG MAANL++ GF V
Sbjct: 3 VGFLGLGIMGKAMAANLLRHGFRV 26
Score = 25.8 bits (54), Expect(2) = 0.002
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 378 NKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 470
N+ + V KDGV+ +G +D ST+D
Sbjct: 30 NRTLSKVVFDKDGVLEQIGEGKGYVDMSTVD 60
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 49.6 bits (113), Expect = 3e-06
Identities = 51/224 (22%), Positives = 81/224 (36%), Gaps = 2/224 (0%)
Frame = +3
Query: 48 LLCARAHGRTLN*EKNKFKMAARTILSTQCLYTAARRAYSSNTDKNVAFLGLGNMGGFMA 227
LLCARA AR + S C +++ + V FLGLG MG MA
Sbjct: 9 LLCARAAAAAPTLRLRGGGRGARLVFS--CSASSSSPSGEGGFSGKVGFLGLGIMGAPMA 66
Query: 228 ANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVYLG 407
+NL+ G V ++ ++ + G S ++L + ++V G
Sbjct: 67 SNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFAMLADPESAVEVACG 126
Query: 408 KDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTD-APVSGGVMGAQNATLAF- 581
+G G +D ST+D K I G F + S +G F
Sbjct: 127 ANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLERCDFSSCTVGPMLTRYLFS 186
Query: 582 MXGGRKEDFXRSLPLLKVMGAKQFHCGQIXSGQVAKLTNNMLMG 713
+ + + + + +F G + G KL NM+MG
Sbjct: 187 RLQFQAQKSQQKMGCSSFLPQSRFFLGDVGKGADMKLVVNMVMG 230
>06_01_0080 + 644021-645463
Length = 480
Score = 36.7 bits (81), Expect = 0.025
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 7/148 (4%)
Frame = +3
Query: 186 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPAN-SIXXXXXXXXXXX 362
+ GL MG +A N+ +KGF + Y+ + ++ + N +
Sbjct: 6 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPASFVN 65
Query: 363 SILTSNKVVLDVYLGKD------GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 524
SI V++ V G + AH ++G +ID ++ E+GL +
Sbjct: 66 SIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERGLLY 125
Query: 525 TDAPVSGGVMGAQNATLAFMXGGRKEDF 608
VSGG GA+N + M GG E +
Sbjct: 126 LGMGVSGGEEGARNGP-SLMPGGSFEAY 152
>04_01_0035 - 433848-434372,434905-435381
Length = 333
Score = 30.7 bits (66), Expect = 1.6
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Frame = +3
Query: 147 AARRAY---SSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTP 317
AAR Y S + K+V +GLG++G +A L G T+ Y+ S+ ++ + N
Sbjct: 149 AARGDYPLGSKLSGKHVGIIGLGSIGSLIAKRLQAFGCTI-SYN-SRRPKDSVSYNYFPD 206
Query: 318 ANSIXXXXXXXXXXXSILTSNKVVLDVY----LGKDGVVAHAKKGSLLIDSSTI 467
+ ++ + ++D LGKDGVV + +G ++ ++ I
Sbjct: 207 VTDLAAASDVLIVACALNDETRHIVDSSVLEALGKDGVVVNIARGGIVDEAELI 260
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = -1
Query: 718 VMPINMLLVSLATCPEXICPQWNCLAPITLRRGRDLXKSSLRPPXMKARVAF*APMTPPD 539
V+PI+ L V+L + P P C A T+RR PP R+A P PP+
Sbjct: 59 VVPIH-LPVALLSLPRCRPPPAACAAS-TVRRPAAPSPPPASPPPPPPRLALRFPRRPPE 116
Query: 538 TGASVNPSPFS 506
PS FS
Sbjct: 117 LPPRRRPSRFS 127
>02_02_0184 -
7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 222 MAANLVKKGFTVRGYDPSKDALN 290
+A L+K+G RGYD SKD+ N
Sbjct: 251 VARRLLKQGLPFRGYDESKDSYN 273
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = -1
Query: 691 SLATCPEXICPQWNCLAPITLRRGRDLXKSSLRPPXMKARVAF*APMTPPDTGASVNPSP 512
S A P P++ +T R L ++ P +R P +PP GAS P
Sbjct: 180 SSAIPPPATAPRFPPPRAMTARTALALSPTTSASPASPSRTRLAPPRSPPAGGASGAPRR 239
Query: 511 FSKAIGKICLGTFG 470
S A C G G
Sbjct: 240 SSSAASPSCAGVEG 253
>06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216
Length = 218
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 435 FSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 316
F E + G A L WS W R R +H R Q W WL
Sbjct: 68 FMQEEGGKVFTGRMCATLPWWSTW-RGRWIHLRDQPWLWL 106
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 186 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 314
+A +G GN G F+A ++G T+ + S D + AA G +
Sbjct: 704 IAIVGFGNFGQFLARTFARQGHTLLAHSRS-DYSSLAASVGAS 745
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 658 QWNCLAPITLRRG-RDLXKSSLRPPXMKARVAF*APMTPPDTGASVNPSPFSKA 500
+W+ AP+ G R+ + L PP A P PP A PSPF A
Sbjct: 236 RWSRAAPLPPHNGERERPRLVLDPPKRDASAT---PTPPPAEAARSRPSPFGAA 286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,886,528
Number of Sequences: 37544
Number of extensions: 619080
Number of successful extensions: 1566
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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