Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E11
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-8|CAB03798.1| 299|Caenorhabditis elegans Hypothetical pr... 116 3e-26
AL031630-23|CAA21003.1| 299|Caenorhabditis elegans Hypothetical... 116 3e-26
Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical p... 43 3e-04
Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical p... 31 1.4
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 30 2.5
AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical... 29 3.3
U41275-3|AAA82466.1| 612|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68318-5|CAA92694.1| 418|Caenorhabditis elegans Hypothetical pr... 29 5.8
>Z81453-8|CAB03798.1| 299|Caenorhabditis elegans Hypothetical
protein B0250.5 protein.
Length = 299
Score = 116 bits (278), Expect = 3e-26
Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Frame = +3
Query: 192 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 371
F+GLGNMGG MA NL+K G + YD +K + G A ++L
Sbjct: 6 FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65
Query: 372 TSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGV 551
S+ V VY G+ G+ + G+L +DSSTID V ++ A + DAP+SGGV
Sbjct: 66 PSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGV 125
Query: 552 MGAQNATLAFMXG-GRKEDFXRSLPLLKVMGAKQFHCGQIXSGQVAKLTNNMLMGI 716
GAQ ATL FM G G F R+ +L +MG + G + +G AK+ NNML+GI
Sbjct: 126 TGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGI 181
>AL031630-23|CAA21003.1| 299|Caenorhabditis elegans Hypothetical
protein B0250.5 protein.
Length = 299
Score = 116 bits (278), Expect = 3e-26
Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Frame = +3
Query: 192 FLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSIL 371
F+GLGNMGG MA NL+K G + YD +K + G A ++L
Sbjct: 6 FIGLGNMGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVL 65
Query: 372 TSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGV 551
S+ V VY G+ G+ + G+L +DSSTID V ++ A + DAP+SGGV
Sbjct: 66 PSSPHVKAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGV 125
Query: 552 MGAQNATLAFMXG-GRKEDFXRSLPLLKVMGAKQFHCGQIXSGQVAKLTNNMLMGI 716
GAQ ATL FM G G F R+ +L +MG + G + +G AK+ NNML+GI
Sbjct: 126 TGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGI 181
>Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 43.2 bits (97), Expect = 3e-04
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 11/186 (5%)
Frame = +3
Query: 177 DKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS----KDAL-NAAAKNGVTPANSIXXXX 341
+ ++A +GL MG + N+ GFTV ++ + D L N A + A+SI
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 342 XXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLG 521
++ K V + D +V H ++G ++ID + + KG+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 522 FTDAPVSGGVMGAQNATLAFMXGGRKEDFXRSLPLLKVMGAKQ--FHC----GQIXSGQV 683
F VSGG GA+ + M GG + + + + + AK C G SG
Sbjct: 123 FVGCGVSGGEEGARFGP-SLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDWVGNAGSGHF 181
Query: 684 AKLTNN 701
K+ +N
Sbjct: 182 VKMVHN 187
>Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 43.2 bits (97), Expect = 3e-04
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 11/186 (5%)
Frame = +3
Query: 177 DKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS----KDAL-NAAAKNGVTPANSIXXXX 341
+ ++A +GL MG + N+ GFTV ++ + D L N A + A+SI
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 342 XXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLG 521
++ K V + D +V H ++G ++ID + + KG+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 522 FTDAPVSGGVMGAQNATLAFMXGGRKEDFXRSLPLLKVMGAKQ--FHC----GQIXSGQV 683
F VSGG GA+ + M GG + + + + + AK C G SG
Sbjct: 123 FVGCGVSGGEEGARFGP-SLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDWVGNAGSGHF 181
Query: 684 AKLTNN 701
K+ +N
Sbjct: 182 VKMVHN 187
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 180 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKN 305
+ +A LGLG +G +A L G V G+DP A AKN
Sbjct: 146 RTLAVLGLGRIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKN 187
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 180 KNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAK 302
+NVA +G G MG +A GF V D +K AL+ A K
Sbjct: 12 RNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMK 52
>Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical
protein Y57G11C.11a protein.
Length = 268
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 201 LGNMGGFMAANLVKKGFTVRGYDPSKDALNAA 296
+G+ GG ++ L + GF V G D +K A+ AA
Sbjct: 82 VGSGGGLLSIPLARSGFDVTGIDATKQAVEAA 113
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 513 LSLRL*GRSVWEHSDLSYSNRSEAILFSHEPQRHLCPGTRRARL 382
LS R +W ++++ SEA+++ H PQ + PGT A +
Sbjct: 1453 LSNRWNNEKIWLQK-VNFTRNSEAVMWLHSPQHAVVPGTPIAEI 1495
>AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical
protein Y71H2AM.2 protein.
Length = 300
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 712 PINMLLVSLATCPEXICPQWNCLAPITLRRGRDLXKSSLRPP 587
P N LL+ A+ CP+ NC ITL RD +++R P
Sbjct: 103 PCNCLLICKASSTRIACPRNNCRRVITLAGQRD-PGTAIRAP 143
>U41275-3|AAA82466.1| 612|Caenorhabditis elegans Hypothetical
protein T25D1.1 protein.
Length = 612
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 130 LSVCTQPPDGRIVLTPTRMWLSSAS-ETWED 219
+ VC PP TPTR+ L SAS + W+D
Sbjct: 544 ICVCNLPPRCLRTCTPTRLQLPSASNDVWDD 574
>Z68318-5|CAA92694.1| 418|Caenorhabditis elegans Hypothetical
protein T21B10.4 protein.
Length = 418
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = -3
Query: 608 EVFFTTSXHEGQGSVLSTHDSSRYRCICESQPFL*GYREDLFGNIRIYRTRIDQKRSFFR 429
E FF + H ++S H RY S F ++ED + Y+ RID + F
Sbjct: 168 EQFFVSGLHTDNFKLISLH---RYYRSSPSSRF--EWQEDQYAGKFYYKERIDDQIQLFE 222
Query: 428 MSHNAIFA 405
+ NA+ A
Sbjct: 223 IPMNALVA 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,199,469
Number of Sequences: 27780
Number of extensions: 465425
Number of successful extensions: 1122
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -