Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E10
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.018
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.018
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.12
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.16
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.22
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.22
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.22
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.29
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.43
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 2.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 3.2
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 26 8.1
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.1
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.018
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 717 PPPPXPXXPPPXPPXXPPPP 776
PPPP P PP P PPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 33.9 bits (74), Expect = 0.031
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 701 IPXXXPPPPXPXXPPPXPPXXXPPPXDPP 787
+P PPPP P PP P PPP PP
Sbjct: 4 LPPGNPPPPPP--PPGFEPPSQPPPPPPP 30
Score = 33.5 bits (73), Expect = 0.041
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 708 PXXPPPPXPXXPPPXPPXXPPP 773
P PPPP PP PP PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 33.5 bits (73), Expect = 0.041
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 715 PPPPXXPXXPPXXPPXXPPPPG 780
PPPP P P P PPPPG
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPG 31
Score = 33.1 bits (72), Expect = 0.054
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 705 LPXXPPPPXPXXPPPXPPXXPPPP 776
LP PPP P P PP PPPP
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPP 27
Score = 29.9 bits (64), Expect = 0.50
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 742 PPXXPPXXPPPPGSXLLXXXNXPPP 816
PP PP PPPPG PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 826 GNPXGEXNXPXXKGXIXGG-GGXXGGXGGGXXGXGGG 719
G P G P G GG GG GG GGG G GGG
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 789 KGGSXGGGXXXGGXGGGXXGXGGG 718
+GG G G GG GGG G GGG
Sbjct: 234 EGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 786 GGSXGGGXXXGGXGGGXXGXGGG 718
GG G G GG GGG G GGG
Sbjct: 242 GGPGGFGGGLGGFGGGPGGFGGG 264
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.9 bits (69), Expect = 0.12
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 789 KGGSXGG--GXXXGGXGGGXXGXGGGGXMXG 703
+GGS GG G GG GGG G GGG G
Sbjct: 147 RGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = -3
Query: 820 PXGEXNXPXXKGX---IXGG-GGXXGGXGGGXXGXGGGGXXG 707
P G N P +G GG GG GG GG G GGG G
Sbjct: 127 PKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRG 168
Score = 30.3 bits (65), Expect = 0.38
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Frame = -3
Query: 844 KPXXXXGNPXGEXNXPXXKGXIXG-----GGGXXGGXGGGXXGXGGGGXXG 707
KP P G +G G GG GG GGG G GGG G
Sbjct: 126 KPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRG 176
Score = 29.1 bits (62), Expect = 0.87
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 772 GGGXXGGXGGGXXGXGGGGXXG 707
GGG GG GGG G GG G
Sbjct: 163 GGGSRGGFGGGSRGGSRGGFRG 184
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -1
Query: 789 KGGSXGG-GXXXGGXGGGXXGXGGGGXMXG 703
+GG GG G GG GG G GGG G
Sbjct: 140 RGGFRGGRGGSRGGFGGNSRGGFGGGSRGG 169
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 717 PPPPXPXXPPPXPPXXPPPPXIXPFXXG*XXSP 815
PP PPP P PPPP P G +P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 708 PXXPPPPXPXXPPPXPPXXPPPPXIXP 788
P PPPP PPP P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 31.1 bits (67), Expect = 0.22
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +2
Query: 716 PPPPXPXXPPPX-PPXXXPPPXDPP 787
PPPP PPP PP PP PP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 31.1 bits (67), Expect = 0.22
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 717 PPPPXPXXPPPXPPXXPPPP 776
PPPP P PP PPPP
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 652 PXPTXEXRY*TLTXXTYSXHXPPPPXXPXXPPXXPPXXPPPPGSXLLXXXNXPPPL 819
P T R + S PPPP PP P P P S PPPL
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSA------PPPPL 1735
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 704 PXXXPPPPXPXXPPPXPPXXXPPPXDP 784
P PPP P P P PPP P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 701 IPXXXPPPPXPXXPPPXPPXXXPPPXDP 784
+P PP P PP PP P P
Sbjct: 1714 VPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.22
Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 10/66 (15%)
Frame = +2
Query: 704 PXXXPPPPXPXXPPPXP------PXXXPPPXDP----PFXXGXIXLPXWIPXXXPRFXPX 853
P PPP P PP P P PPP P LP +P P+ P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 854 PXXXSP 871
P +P
Sbjct: 205 PLSQAP 210
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +3
Query: 708 PXXPPPPXPXXP---PPXPPXXPPPP 776
P PP P P PP PP PPPP
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 30.3 bits (65), Expect = 0.38
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 708 PXXPPPPXPXXPPPXPPXXPPPPXIXP 788
P PP P PPP P PP P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAP 165
Score = 29.1 bits (62), Expect = 0.87
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 720 PPPXPXXPPPXPPXXPPPPXIXP 788
PPP P PP P PP P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLP 172
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 718 PPPXXPXXPPXXPPXXPPPPGSXLLXXXNXPPP 816
PPP P P PP P P + PPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 715 PPPPXXPXXPPXXPPXXPPPP 777
P P P P PP PPPP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPP 205
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +1
Query: 724 PXXPXXPPXXPPXXPPPPGSXLLXXXNXPPP 816
P P PP P PP P + PPP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 708 PXXPPPPXPXXPPPXPPXXPPPPXIXP 788
P P PP P P PP P I P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPP 151
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -1
Query: 855 GXGXNLGXXMGIQXGRXIXPX*KGGSXGGGXXXGGXGGGXXGXGG 721
G G + G G GR +GG+ GGG GG GG G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGG--RGGARGGRGGRGG 52
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -3
Query: 826 GNPXGEXNXPXXKGXIXGG-GGXXGGXGGGXXGXGGGGXXGR 704
G+ G +G GG GG GG GG G GG GR
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGR 47
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 799 PXXKGXIXGGGGXXGGXGGGXXGXGGGGXXGR 704
P +G G G GG GG G GGG R
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGAR 36
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = -1
Query: 789 KGGSXGG-GXXXGGXGGGXXGXGG--GGXMXG 703
+GGS GG G GG GG G GG GG G
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 789 KGGSXGGGXXXGGXGGGXXGXGGG 718
+GG+ GG GG GG G GG
Sbjct: 40 RGGARGGRGGRGGARGGRGGSSGG 63
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 789 KGGSXGGGXXXGGXGGGXXGXGG 721
+GG G G GG GG G GG
Sbjct: 44 RGGRGGRGGARGGRGGSSGGRGG 66
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = -3
Query: 826 GNPXGEXNXPXXKGXIXGG--GGXXGGXGGGXXGXGG-GGXXG 707
G+ G +G GG G GG GG G GG GG G
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 790 KGXIXGGGGXXGGXGGGXXGXGG 722
+G G GG GG GG G GG
Sbjct: 44 RGGRGGRGGARGGRGGSSGGRGG 66
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.22
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 717 PPPPXPXXPPPXPPXXPPPP 776
PPPP P PP PPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 715 PPPPXXPXXPPXXPPXXPPPPGSXLLXXXNXPPP 816
PPPP P P P PP + ++ PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 30.7 bits (66), Expect = 0.29
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 715 PPPPXXPXXPPXXPPXXPPPP 777
PPPP P PP PPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.50
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 708 PXXPPPPXPXXPPPXPPXXPPPPXI 782
P PPPP PP PPPP +
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Frame = +1
Query: 715 PPPPXXPXXPPXX----PPXXPPPPGSXLLXXXNXPPP 816
P P P PP PP PPPPG PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 719 PPPXPXXPPPXPPXXXPPPXDPP 787
P P P PPP P PPP PP
Sbjct: 746 PAPIPV-PPPAPIMGGPPPPPPP 767
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Frame = +2
Query: 701 IPXXXPPPPXPXXPPPXPP----XXXPPPXDPP 787
IP P P PPP PP PPP PP
Sbjct: 749 IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +2
Query: 668 SXDIEXSXXXXIPXXXPPPPXPXXPPPXP-PXXXPPP 775
S +E + PPPP P P P P PPP
Sbjct: 718 SDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPP 754
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +1
Query: 715 PPPPXXPXXPPXXPPXXPPPPGSXLLXXXNXPPP 816
PPPP P P PPP + PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = +3
Query: 705 LPXXPPPPXPXXPPP----XPPXXPPPPXI 782
+P P P P PP PP PPPP +
Sbjct: 741 VPTPAPAPIPVPPPAPIMGGPPPPPPPPGV 770
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 716 PPPPXPXXPPPXPPXXXPPPXDPP 787
PPPP P PP PPP PP
Sbjct: 761 PPPPPP--PPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 704 PXXXPPPPXPXXPPPXPPXXXPP 772
P PPPP P PP PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 715 PPPPXXPXXPPXXPPXXPPPPGSXLLXXXNXPPPL 819
PP P P PP PP PP L PPL
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Score = 29.5 bits (63), Expect = 0.66
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 705 LPXXPPPPXPXXPPPXPPXXPPPPXIXPFXXG*XXSP 815
LP PP P P PP P P P G +P
Sbjct: 431 LPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP 467
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 719 PPPXPXXPPPXPPXXXPPPXDPPFXXGXIXLPXWIPXXXPRFXPXP 856
PP P P PP P PP G P +P P P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP-LPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +1
Query: 718 PPPXXPXXPPXXPPXXPPPPGSXLLXXXNXPP 813
PP P PP PPP + N PP
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 26.2 bits (55), Expect = 6.1
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 5/56 (8%)
Frame = +2
Query: 704 PXXXPPPPXPXXPPPXPPXXXP-----PPXDPPFXXGXIXLPXWIPXXXPRFXPXP 856
P PP P PP PP P P PP P +P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP-LPAGMPAAPPLP 470
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +2
Query: 701 IPXXXPPPPXPXXPPPXPPXXXPPPXDPPFXXGXIXLPXWIPXXXP 838
+P PP P PP P P PP LP +P P
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 8/43 (18%)
Frame = +1
Query: 715 PPPPXXPXX--------PPXXPPXXPPPPGSXLLXXXNXPPPL 819
PPPP P PP PPPP PPPL
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL 379
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 708 PXXPPPPXPXXPPPXPPXXPPPPXIXP 788
P PP P P P PPPP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLP 247
Score = 27.1 bits (57), Expect(2) = 0.43
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 726 PXPXXPPPXPPXXPP 770
P P PPP PP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 26.2 bits (55), Expect(2) = 0.72
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 705 LPXXPPPPXPXXPP 746
LP PPPP P PP
Sbjct: 235 LPAPPPPPPPTLPP 248
Score = 22.6 bits (46), Expect(2) = 7.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 725 PXPXXPPPXPPXXXPPPXDPPFXXGXIXLP 814
P P P PP PPP PP LP
Sbjct: 229 PKQADPLPAPP-PPPPPTLPPQSTNTSQLP 257
Score = 21.4 bits (43), Expect(2) = 7.1
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +2
Query: 701 IPXXXPPPPXPXXPP 745
+P PPP P PP
Sbjct: 183 LPSDYNPPPPPPPPP 197
Score = 21.4 bits (43), Expect(2) = 0.43
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 705 LPXXPPPPXPXXPPP 749
LP PP P PPP
Sbjct: 183 LPSDYNPPPPPPPPP 197
Score = 21.4 bits (43), Expect(2) = 0.72
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 741 PPPXPPXXPPPP 776
PPP P PP P
Sbjct: 274 PPPATPSQPPRP 285
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 701 IPXXXPPPPXPXXPPPXPPXXXPPPXDPP 787
+P PP P P PP P P PP
Sbjct: 1036 VPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +2
Query: 716 PPPPXPXXPPPXP-PXXXPPPXDPPFXXGXIXLP 814
PP P P PP P P PP PP + P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +2
Query: 704 PXXXPPPPXPXX--PPPXPPXXXPPPXDPPFXXGXIXLP 814
P PP P P PP PP PP P + +P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Frame = +2
Query: 704 PXXXPPPPXPXXPPPXP-PXXXPPPXDPP 787
P PP P P PP P P PP P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 754 PPXXPPPPGSXLLXXXNXPPPLD 822
PP PPPP + N P P D
Sbjct: 307 PPPPPPPPSNDFWKDSNEPAPAD 329
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.6 bits (51), Expect(2) = 3.2
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 744 PPXPPXXPPPPXIXPFXXG*XXSP 815
P PP PPPP + G SP
Sbjct: 942 PAFPPPPPPPPPLVSAAGGKFVSP 965
Score = 20.6 bits (41), Expect(2) = 3.2
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 705 LPXXPPPPXPXXPPPXP 755
LP P P PPP P
Sbjct: 898 LPTIITHPTPPPPPPLP 914
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +2
Query: 725 PXPXXPPPXPPXXXPPPXDPPFXXGXIXLPXWIP 826
P PP P P DP + G + P W P
Sbjct: 586 PSTVPPPTNPYNPGYPYMDPNYSSGYVSQPPWQP 619
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +1
Query: 721 PPXXPXXPPXXPPXXPPPPGS--XLLXXXNXPPP 816
PP P P P P PGS +L PPP
Sbjct: 108 PPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPP 141
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 4/28 (14%)
Frame = +2
Query: 716 PPPPXPXXPPPXPPXXXP----PPXDPP 787
PPPP P PP P PP PP
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,425,793
Number of Sequences: 5004
Number of extensions: 41567
Number of successful extensions: 632
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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