Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E08
(836 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 246 2e-65
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 245 3e-65
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 244 5e-65
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 1.1
05_03_0654 - 16646717-16647230,16647472-16647633,16648004-166482... 29 3.5
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 4.6
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 6.1
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 29 6.1
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906... 28 8.0
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 28 8.0
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 8.0
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 246 bits (602), Expect = 2e-65
Identities = 112/156 (71%), Positives = 128/156 (82%)
Frame = +3
Query: 78 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 257
ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ LRNRLKYALT EV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 258 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKY 437
+ I+ QR + VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGRF +H I E+AK+
Sbjct: 78 ISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKF 137
Query: 438 KLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVN 545
KLCKV+ V G K +P+L T+DGRTIRYPDPLIK N
Sbjct: 138 KLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKAN 173
Score = 105 bits (251), Expect = 6e-23
Identities = 45/85 (52%), Positives = 63/85 (74%)
Frame = +1
Query: 532 LSKSTDSIQLDIATTKIMDFIKFESGNLCMITGRRNLGRVGTIVSRERHPGSFDIVHIKD 711
L K+ D+I++D+ T KI+DFIKF+ GN+ M+TG RN GRVG I SRE+H GSF+ +H++D
Sbjct: 169 LIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHVED 228
Query: 712 STGHTFATXLNNVFIIXXGTKAYIS 786
+ GH FAT + NVF I K ++S
Sbjct: 229 ALGHQFATRMGNVFTIGKERKPWVS 253
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 245 bits (600), Expect = 3e-65
Identities = 110/157 (70%), Positives = 129/157 (82%)
Frame = +3
Query: 75 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 254
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 255 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 434
V+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 435 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVN 545
+KLCKV+ V G K +PYL T+DGRTIRYPDPLIK N
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKAN 157
Score = 108 bits (259), Expect = 6e-24
Identities = 46/85 (54%), Positives = 64/85 (75%)
Frame = +1
Query: 532 LSKSTDSIQLDIATTKIMDFIKFESGNLCMITGRRNLGRVGTIVSRERHPGSFDIVHIKD 711
L K+ D+I++D+ T KI+DFIKF+ GN+ M+TG RN GRVG I +RE+H GSF+ +H++D
Sbjct: 153 LIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVED 212
Query: 712 STGHTFATXLNNVFIIXXGTKAYIS 786
+ GH FAT L NVF I G K ++S
Sbjct: 213 ALGHAFATRLGNVFTIGKGNKPWVS 237
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 244 bits (598), Expect = 5e-65
Identities = 109/157 (69%), Positives = 129/157 (82%)
Frame = +3
Query: 75 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 254
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ +RNRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 255 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 434
V+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+AK
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 435 YKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVN 545
+KLCKV+ V G K +PYL T+DGRTIRYPDP+IK N
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKAN 157
Score = 107 bits (256), Expect = 1e-23
Identities = 45/83 (54%), Positives = 63/83 (75%)
Frame = +1
Query: 538 KSTDSIQLDIATTKIMDFIKFESGNLCMITGRRNLGRVGTIVSRERHPGSFDIVHIKDST 717
K+ D+I++D+ T KI+DFIKF+ GN+ M+TG RN GRVG I +RE+H GSF+ +H++D+
Sbjct: 155 KANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDAL 214
Query: 718 GHTFATXLNNVFIIXXGTKAYIS 786
GH FAT L NVF I G K ++S
Sbjct: 215 GHQFATRLGNVFTIGKGNKPWVS 237
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 219 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 118
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>05_03_0654 -
16646717-16647230,16647472-16647633,16648004-16648203,
16648453-16648624,16650226-16650647,16650742-16650987
Length = 571
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -1
Query: 575 VVAMSNWMESVDFDKWVWVADGAAIMRYQVRNILRSGRH 459
V M N D+ KW W DG + R+ + +L R+
Sbjct: 197 VTCMRNGRRDDDYQKWRWQPDGCDLPRFDAKLLLEKLRN 235
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 232 FRRFLRKITRGKHSRNLWGPVDGLGAYTPPSLSNIHALGAFKR 104
F L ++ + L G G+G Y PPSLSN + AFKR
Sbjct: 35 FNVALNRLPASAGASPLLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 191 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 78
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 116 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESS----EVCFDRKRSPENCETTP 280
+QS+ V + RCV ETV + P + R+ G+F + + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>08_02_1196 -
25190040-25190065,25190224-25190302,25190554-25190646,
25190761-25190892,25191578-25191721,25192941-25193150,
25194915-25195406
Length = 391
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 734 VAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLRRPVIIHKFPD 603
V KV PV+SL C + C+S + + PVI+ + D
Sbjct: 165 VLKVLPVKSLSCKQIERRSCISLEAFIRDYFLCESPVILSGYID 208
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 796 ARQARCTPSCPXXL*TRCSTSWRRCVPWSP*CA--QCRRSRDVSRGTRWCPHAPSY 635
AR AR +P R + +RC+P S A +CR+SR S+ W P+ S+
Sbjct: 408 ARDARLSPE-------RLVDAVQRCLPESLRAAVQRCRQSRPASKVVEWAPYRHSF 456
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 369 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGP 473
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,106,314
Number of Sequences: 37544
Number of extensions: 511966
Number of successful extensions: 1589
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1588
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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