Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E07
         (865 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,...   151   2e-36
AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,...   151   2e-36
AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p pro...   150   3e-36
BT021270-1|AAX33418.1|  406|Drosophila melanogaster RE47240p pro...    29   8.3  
AE014296-1792|AAF50174.2|  496|Drosophila melanogaster CG32053-P...    29   8.3  

>AE014298-771|AAF46058.2|  123|Drosophila melanogaster CG4111-PA,
           isoform A protein.
          Length = 123

 Score =  151 bits (365), Expect = 2e-36
 Identities = 80/123 (65%), Positives = 88/123 (71%)
 Frame = +2

Query: 98  MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 277
           M KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIV 60

Query: 278 YHQKMKVNLRNHYKNKKYKPLXLRAKKTRAMRKALTKHEAKIXTRKEIRKKSLFPPRVYA 457
            HQK K NLR  +KNKKYKPL LR KKTRA+RKAL+  +A   T KEIRK+S+FP R +A
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFA 120

Query: 458 VKA 466
           VKA
Sbjct: 121 VKA 123


>AE014298-770|AAN09148.1|  123|Drosophila melanogaster CG4111-PB,
           isoform B protein.
          Length = 123

 Score =  151 bits (365), Expect = 2e-36
 Identities = 80/123 (65%), Positives = 88/123 (71%)
 Frame = +2

Query: 98  MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 277
           M KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGAPSKLSKIRVVRKAIARVYIV 60

Query: 278 YHQKMKVNLRNHYKNKKYKPLXLRAKKTRAMRKALTKHEAKIXTRKEIRKKSLFPPRVYA 457
            HQK K NLR  +KNKKYKPL LR KKTRA+RKAL+  +A   T KEIRK+S+FP R +A
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFA 120

Query: 458 VKA 466
           VKA
Sbjct: 121 VKA 123


>AY118364-1|AAM48393.1|  123|Drosophila melanogaster RE09547p
           protein.
          Length = 123

 Score =  150 bits (363), Expect = 3e-36
 Identities = 80/123 (65%), Positives = 88/123 (71%)
 Frame = +2

Query: 98  MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 277
           M KVKCSELR KD                +LRVAKVTGG  SKLSKIRVVRKAIARVYIV
Sbjct: 1   MVKVKCSELRIKDKKELTKQLDELKNELLSLRVAKVTGGSPSKLSKIRVVRKAIARVYIV 60

Query: 278 YHQKMKVNLRNHYKNKKYKPLXLRAKKTRAMRKALTKHEAKIXTRKEIRKKSLFPPRVYA 457
            HQK K NLR  +KNKKYKPL LR KKTRA+RKAL+  +A   T KEIRK+S+FP R +A
Sbjct: 61  MHQKQKENLRKVFKNKKYKPLDLRKKKTRAIRKALSPRDANRKTLKEIRKRSVFPQRKFA 120

Query: 458 VKA 466
           VKA
Sbjct: 121 VKA 123


>BT021270-1|AAX33418.1|  406|Drosophila melanogaster RE47240p
           protein.
          Length = 406

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 487 WILIIYSSFNGIDSRWEERFLSDLFPR 407
           W+L+IY  F GI       +LS+ FPR
Sbjct: 299 WLLLIYQLFAGIAFAPSSSYLSEAFPR 325


>AE014296-1792|AAF50174.2|  496|Drosophila melanogaster CG32053-PA
           protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 487 WILIIYSSFNGIDSRWEERFLSDLFPR 407
           W+L+IY  F GI       +LS+ FPR
Sbjct: 389 WLLLIYQLFAGIAFAPSSSYLSEAFPR 415


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,034,520
Number of Sequences: 53049
Number of extensions: 309116
Number of successful extensions: 825
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)