Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E06
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   6.0  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   8.0  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = -2

Query: 664 GXGGGXXVXXXXXXGGXKXKGGGXXRFFXKKXGFXXXXFXGGG 536
           G GGG         GG   +GGG  R   +        F GGG
Sbjct: 56  GYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 15/55 (27%), Positives = 17/55 (30%)
 Frame = +2

Query: 497 GPPXXKXXLGGWXPPPXKXXXXKXSFFXKKPXAPPXLXFPPPXXXGXXHXXXPPP 661
           GPP     +    PPP      +       P APP L  P            PPP
Sbjct: 70  GPPKPNISI----PPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 104 HCQRGPKETTKVSVKCQTXQN 42
           HC R  +E  +++VKC T  N
Sbjct: 924 HCPRFAEERHEITVKCGTTIN 944


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,432
Number of Sequences: 2352
Number of extensions: 10874
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)