Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_E05
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0904 + 20717005-20718087                                         31   0.96 
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   2.2  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   3.9  
10_08_1037 - 22477358-22478752                                         28   9.0  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312...    28   9.0  

>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 31/120 (25%), Positives = 39/120 (32%)
 Frame = +3

Query: 537 RPPDEHHXNRRSSQKWAKTXRTIKIPGVFPLETXLXPPXCSEPXPLTRIPVRPFXPSGKR 716
           +PP EH        K  K  +  K P   P +    PP  + P P    P  P+ P  K 
Sbjct: 46  KPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYT-PTPKPTPP--PYTP--KP 100

Query: 717 WRLSHYLTPGRYLXSGVRSXPSQPGAVVXQTPPFNPXPXXPYPGNYXLXFHPGXKXXYPP 896
              +H  TP  Y  +     P+ P       P   P    P P  Y     P     Y P
Sbjct: 101 TPPAHTPTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPPPTYKP 160


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 27/77 (35%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
 Frame = +2

Query: 623 PPGNXPXAPXLFRTLXPYPDTCPPFLPFRETLAPFSLPHPW*VSXFRC*VXPLPTWGCGS 802
           PP   P  P L     P P   PP LP    L P   P P      R  V P P  G G+
Sbjct: 602 PPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRL-VPPPPAPGIGN 660

Query: 803 --PNPPVQPXXXXPLSR 847
             P PP  P      SR
Sbjct: 661 KFPAPPPPPPPPRSSSR 677


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +3

Query: 762  GVRSXPSQPGAVVXQTPPFNPXPXXPYPGNYXLXFHPGXK 881
            GV   P+ PGA     PP  P    P PG   L   PG +
Sbjct: 1194 GVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGGR 1233


>10_08_1037 - 22477358-22478752
          Length = 464

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 724 FLITSPLVGISXPVLG-RSPPNLGLWFXKPPRSTPXPXXLIPV 849
           F   SPL G      G  +PP+ GLWF + P     P   +P+
Sbjct: 414 FPALSPLPGTGILGPGPMAPPSPGLWFPQSPSGLLSPSGFLPI 456


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 293 NESAN---ARGEAVCVLGALPLPRSLTRCAR 376
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_03_0388 +
           18429538-18430598,18430971-18431081,18431165-18431237,
           18431513-18431695
          Length = 475

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
 Frame = +3

Query: 717 WRLSHYLTPGRYLXSGVRSXPSQPG--AVVXQTPPFNPXPXXP 839
           WR  + + PGR   S   S P+ P        +PP  P P  P
Sbjct: 58  WRKQYIIIPGRQAASRAPSPPAPPSPPQASAPSPPHAPAPSPP 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,840,283
Number of Sequences: 37544
Number of extensions: 515791
Number of successful extensions: 1272
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)