Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E03
(878 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0519 - 34481751-34482722 34 0.17
02_05_1081 + 33971950-33972606 33 0.30
02_03_0265 + 17066253-17066501,17067102-17068121 31 0.92
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 31 1.2
01_07_0082 - 40965947-40967023 30 2.8
12_01_0419 - 3316866-3318172,3318249-3318360 29 3.7
03_03_0142 + 14800317-14801240 29 3.7
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 29 4.9
03_06_0437 - 33912326-33912520,33912870-33912998,33913147-339133... 29 4.9
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 29 6.5
07_01_0020 - 127855-129156,129240-129365,129811-129865,130047-13... 29 6.5
06_01_0944 + 7264833-7265120,7265511-7265600,7265702-7265798,726... 29 6.5
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 29 6.5
03_01_0659 + 4829496-4829596,4830033-4830083,4832527-4834237 29 6.5
02_05_1149 + 34471730-34471790,34471975-34472056,34472605-344732... 29 6.5
10_08_0050 + 14469879-14470072,14470620-14471094 28 8.6
09_04_0534 + 18393794-18394066 28 8.6
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 28 8.6
04_04_0176 - 23329589-23331043 28 8.6
02_05_0265 + 27267361-27268494 28 8.6
>03_06_0519 - 34481751-34482722
Length = 323
Score = 33.9 bits (74), Expect = 0.17
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 12/126 (9%)
Frame = +2
Query: 131 GARLSSRGAPPPRVVATLTSSIPNRSHRGPGAVPFHQAQRALSATGQ------GDEPKAT 292
G R RGA P ++ T + RS R GA P H A+ S+T P AT
Sbjct: 21 GNRKGKRGAEAPPATSSSTPTTARRSKRLAGAPPDHPAEAGPSSTNARRSSRLAGAPPAT 80
Query: 293 XGHFR*RPTGQS------TPKESPGATDPAGGTCCSRARSKADSPVRAGPGAAQGRKPPS 454
G PT S + + + DP S + +R+ A PP+
Sbjct: 81 PGAAAAAPTSSSPTAARRSNRLAGAPPDPPAAVAAPPTSSSPTTAMRSNRLAGAPSDPPA 140
Query: 455 ASGFPP 472
A+ P
Sbjct: 141 AATAGP 146
>02_05_1081 + 33971950-33972606
Length = 218
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 314 PTGQSTPKESPGATDPAGGTCCSRARSKADSPVRAGPGAAQGRKPPSASGFP 469
PT Q P+ + ++ +S AD+PV AGP + PS+ FP
Sbjct: 143 PTDQKAPRPARSKQQQHTAAVPTKIKSVADAPVYAGPAFSSASPEPSSLPFP 194
>02_03_0265 + 17066253-17066501,17067102-17068121
Length = 422
Score = 31.5 bits (68), Expect = 0.92
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 275 DEPKATXGHFR*RPTGQSTPKESPGATDPAGGTCCSRARSKADS--PVRAGPGAAQGRKP 448
D P A + R TP GA+ A T CS +KAD+ ++A P + G K
Sbjct: 200 DRPNALCDYHLARSRSSYTPSSENGASATAAAT-CSSGPTKADAIGKIKAPPAKSSGAKR 258
Query: 449 PSASG 463
S G
Sbjct: 259 NSPGG 263
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 197 PNRSHRGPGAVP--------FHQAQRALSATGQGDEPKATXGHFR---*RPTGQSTPKES 343
P RSHR P A+P + QR G+ P+ G R RP G + P++
Sbjct: 374 PPRSHRVPPAIPSPASLRPRIRRPQRPSGGNLTGERPRIAYGKPRRPPRRPPGLARPRKP 433
Query: 344 PGATDPAGGTCCSRARSKADSPVRAGPGAAQGRKPPSA 457
G P + P R PG GR+P A
Sbjct: 434 LGRRPPGPARPGKPLGRRPPGPAR--PGKPLGRRPDFA 469
>01_07_0082 - 40965947-40967023
Length = 358
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Frame = +2
Query: 143 SSRGAPPPRVVATLTSSIPNRSHRGPGAVPFHQAQRALSATGQGDEPKATXGHFR*RP-- 316
++ A PP+ ++ P + A + Q A G+G+EP P
Sbjct: 165 AAAAAYPPQSTYPPPTAYPTAAKADGSAAAAYPPQSAYPPPGKGNEPSTAYPPPAGYPPA 224
Query: 317 TGQSTPKES--PGATDPAGGTCCSRARSKADSPVRAGPGAAQGRKPPSAS-GFPP 472
TG S P ++ P PA + A P + G G PP A G+PP
Sbjct: 225 TGSSKPAKAGEPVTAYPAAAGPSTAAPYGTAPPPQYGYGYPAQPPPPQAGYGYPP 279
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 423 REQPRAESPQARQGSPRAGFSSGLVVKP 506
R +PR + P+ R+ R GF G+VV P
Sbjct: 421 RRRPRGQGPRRRRRRRRGGFPLGMVVGP 448
>03_03_0142 + 14800317-14801240
Length = 307
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = -3
Query: 435 WAAPGPARTGLSALERALLQQVPPAGSVAPGLS 337
WAAP PAR GLSA A P G+ A S
Sbjct: 195 WAAPPPARKGLSACNPA-AATTTPGGAAAESAS 226
>06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 158 PPPRVVATLTSSIPNRSHRGPGAVPF 235
PPP A + IP++S GPG+V +
Sbjct: 1209 PPPPTKALFQNGIPDQSSNGPGSVSY 1234
>03_06_0437 -
33912326-33912520,33912870-33912998,33913147-33913317,
33913877-33913993,33914150-33914800
Length = 420
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 320 GQSTPKESPGAT---DPAGGTCCSRARSKADSPVRAGPGAAQGRKPPSASGFPPG 475
G++ P + GA +P T + + ADSP R G G+ PP AS PPG
Sbjct: 155 GEAAPPGATGADPPDNPPPATAAASVQGGADSPARGGRGS-----PPPASE-PPG 203
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = -3
Query: 498 PQAPRRTXPGGNPDALGGFRPWAAPGPARTGLSALERALLQQVPPAGSVA 349
P PRR P P P + PGP R S L AL ++ PPAGS A
Sbjct: 38 PPPPRRRTPPPPP-------PGSGPGPQRP--SYLSVALRRRGPPAGSAA 78
>07_01_0020 -
127855-129156,129240-129365,129811-129865,130047-130177
Length = 537
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 492 APRRTXPGGNPDALGGFRPWAAPGP 418
+PRR+ PG +P A GG +AP P
Sbjct: 11 SPRRSRPGPSPPAYGGCAKRSAPPP 35
>06_01_0944 +
7264833-7265120,7265511-7265600,7265702-7265798,
7265927-7265988,7266508-7266596,7266702-7266822,
7266915-7267058,7267492-7267820,7268154-7268394,
7269042-7269245,7271150-7271619,7272703-7272746,
7273121-7273211,7273494-7273596,7273682-7273783,
7274214-7274300,7274421-7274531
Length = 890
Score = 28.7 bits (61), Expect = 6.5
Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = -3
Query: 492 APRRTXPGGN--PDALGGFRPW-AAPGPARTGLSALERALLQQVPPAGSVAPGLSLGVD* 322
AP T P + P+ L P A P P LSA R VP G+ A GLS
Sbjct: 639 APGSTSPSPDVLPEILRHAVPIKATPPPGEPSLSASSR---WAVPRGGAEAAGLSPDALN 695
Query: 321 PVGRYLKCPLVAFG 280
P+ Y+ P FG
Sbjct: 696 PLRSYVSLPQATFG 709
>05_01_0595 +
5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +2
Query: 365 GGTCCSRARSKADSPVRAGPGAAQ---GRKPPSASG--FPPG 475
G T C+RARS A +P R P + R P G PPG
Sbjct: 183 GATACARARSAASAPARPVPARVEMSDSRDPVWEHGENIPPG 224
>03_01_0659 + 4829496-4829596,4830033-4830083,4832527-4834237
Length = 620
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 219 GPRWLRF-GIEDVSVATTRGGGAPLLDRR 136
GP +LR GI+D + A RGGG ++ RR
Sbjct: 384 GPPYLRITGIDDSNSAHARGGGLDIVGRR 412
>02_05_1149 +
34471730-34471790,34471975-34472056,34472605-34473299,
34473375-34473631,34473726-34474407,34474481-34474684,
34474773-34474903,34475068-34475263,34475347-34475587,
34476067-34476214
Length = 898
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +2
Query: 365 GGTCCSRARSKADSPVRAGPGAAQ---GRKPPSASG--FPPG 475
G T C+RARS A +P R P + R P G PPG
Sbjct: 27 GATACARARSAASAPARPVPARVEMLDSRDPVWEHGENIPPG 68
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 374 CCSRARSKADSPVRAGPGAAQGRKP 448
CC D VRAG G +GR+P
Sbjct: 174 CCFGVLGSGDEYVRAGGGGGEGRRP 198
>09_04_0534 + 18393794-18394066
Length = 90
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 341 SPGATDPAGGTCCSRARSKADSPVRAG-PGAAQGRKPPSASGFPP 472
S G D GG R R + SPV G G G P + GF P
Sbjct: 40 SVGDGDEGGGRGSRRRRRRRSSPVFVGAAGICDGTGPGCSGGFGP 84
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 28.3 bits (60), Expect = 8.6
Identities = 31/124 (25%), Positives = 44/124 (35%)
Frame = +2
Query: 101 STPFNVGLNDGARLSSRGAPPPRVVATLTSSIPNRSHRGPGAVPFHQAQRALSATGQGDE 280
S P + L +S+R A P V + + + R P A A +
Sbjct: 19 SIPSELPLPSAPGVSARPADRP-VASQAAAPAASARPRAPATSAAAAAAAAAAVPSFLTN 77
Query: 281 PKATXGHFR*RPTGQSTPKESPGATDPAGGTCCSRARSKADSPVRAGPGAAQGRKPPSAS 460
P HF + TP E+ + S A S A P R+GPG A G + +A
Sbjct: 78 PSRIGRHF---DEDERTPFEAASTPRRPAPSPPSFAPSPAAGPTRSGPGNAWGPRREAAP 134
Query: 461 GFPP 472
P
Sbjct: 135 TAAP 138
>04_04_0176 - 23329589-23331043
Length = 484
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 471 GGNPDALGGFRPWAAPGPARTGLSALERALLQQVPPAGSVAPGLSLG 331
GG GGF P A G S + + V PA A G+++G
Sbjct: 274 GGGGAGYGGFAPMIGQCNAAIGTSMMPSVMSPHVNPAFLAASGMAMG 320
>02_05_0265 + 27267361-27268494
Length = 377
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 225 APGPRWLRFGIEDVSVATTRGGGAPLL 145
AP P+W R G+ V A R GGAPL+
Sbjct: 142 APYPQW-RHGVVHVVAAGRRRGGAPLV 167
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,729,896
Number of Sequences: 37544
Number of extensions: 599792
Number of successful extensions: 2430
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2425
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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