Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_E02
(1060 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 45 2e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.12
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.12
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.63
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.83
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.5
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 28 1.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.4
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 27 3.4
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 5.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/60 (38%), Positives = 25/60 (41%)
Frame = +2
Query: 830 EKXXKKNTPPPXXXTXPHPPXGRXIFXPPPQXKXNXXXGXRRPPPPPKXXXRAPPPPPPP 1009
+K K+ PPP P I PPP G PPPPP PPPPPPP
Sbjct: 725 QKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAP---IMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 32.7 bits (71), Expect = 0.090
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = +1
Query: 868 PHXPPP----PXXXXNFXSSPPXQXKQXXXXPXPPPPPKXXXXXPPPXPPP 1008
P PPP P PP P PPPP PPP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 856 PPXVPHXPPPPXXXXNFXSSPPXQXKQXXXXPXPPPPPKXXXXXPPPXPPP 1008
PP P P PP P PPP PPP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.27
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 444 APPXPPPXXGGXXXXXXXXXXXXXSPPXXLGGEXLPPXPPXXXGGGXPXP 593
+PP PPP P +GG PP PP G G P P
Sbjct: 731 SPPPPPPAV--IVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 29.5 bits (63), Expect = 0.83
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 360 PPPPPXXGEKXFGXPXAPQKXRGXSXXGAPPXPPP 464
P PPP G P P G + G PP PPP
Sbjct: 750 PVPPPAP---IMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -1
Query: 637 PPPPXXKXXPXPPLXGXGXPPPXXXGGXGGRXSPP 533
P P P P+ G PPP G G PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 855 PPXXXXXPPTPPXXAKFXFLPPXTXKTXXXXXXAPPPPQKXXXXPPPXPPP 1007
PP PTP A PP PP PPP PPP
Sbjct: 734 PPPPAVIVPTPAP-APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.1 bits (82), Expect = 0.004
Identities = 24/85 (28%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Frame = +2
Query: 761 PPPPXTTXXXXXXXXXXXRGXXGEKXXKKNTPPPXXX--TXPHPPXGRXIFXPPPQXKXN 934
PPPP G PP + P PP GR PPP +
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSA--PPPPPPRS 368
Query: 935 XXXGXRRPPPPPKXXXRAPPPPPPP 1009
R+PPP + PP PPP
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 35.1 bits (77), Expect = 0.017
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 877 PPPPXXXXNFXSSPPXQXKQXXXXPXPPPPPKXXXXXPPPXPP 1005
PPPP N P P PPPPP+ P PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 31.1 bits (67), Expect = 0.27
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +1
Query: 868 PHXPPPPXXXXNFXSSPPXQXKQXXXXPXPPPPPKXXXXXPPPXPP 1005
P PPP + + PP P P PP PP PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 30.3 bits (65), Expect = 0.48
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 360 PPPPPXXGEKXFGXPXAPQKXRGXSXXGAPPXPPP 464
PPPPP + G P G S PP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPI---GNGSSNSSLPPPPPP 342
Score = 29.5 bits (63), Expect = 0.83
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 9/61 (14%)
Frame = +2
Query: 854 PPPXXXTXPHPPXGRXIFXPPPQXKXNXXXGXRRPPPPPKXXXRA---------PPPPPP 1006
PPP T PP P + P PPP A PPPPPP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Query: 1007 P 1009
P
Sbjct: 317 P 317
Score = 29.5 bits (63), Expect = 0.83
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +1
Query: 877 PPPPXXXXNFXSSPPXQXKQXXXXPXPPPPPKXXXXXPPPXPP 1005
PPPP + PP P PPP P PP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +3
Query: 360 PPPPPXXGEKXFGXPXAPQKXRGXSXXGAPPXPPP 464
PPPPP P PQ G S APP PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQ---GRS---APPPPPP 366
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/76 (23%), Positives = 19/76 (25%)
Frame = +3
Query: 360 PPPPPXXGEKXFGXPXAPQKXRGXSXXGAPPXPPPXXGGXXXXXXXXXXXXXSPPXXLGG 539
PPPPP P R S APP P +PP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 540 EXLPPXPPXXXGGGXP 587
P PP P
Sbjct: 422 SLPPSAPPSLPPSAPP 437
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Frame = +1
Query: 868 PHXPPPPXXXXNFXSSPPXQXKQXXXXPXPPP--PPKXXXXXPPPXPPP 1008
P P + SS P + P PPP PP PP PP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 26.2 bits (55), Expect = 7.8
Identities = 29/124 (23%), Positives = 33/124 (26%), Gaps = 11/124 (8%)
Frame = +1
Query: 670 PPPPQKXTLXXXXXXXXXXXXXXAXXXGXXPPPP-PXHTXXXXXXXXXXXRXXGGXXXXX 846
PPPP + A PPP P + R
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 847 XHXPPXVP-HXPP--PPXXXXNFXSSPPXQXKQXXXXPXP------PP-PPKXXXXXPPP 996
PP P PP PP ++PP P P PP PP P P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 997 XPPP 1008
P P
Sbjct: 481 APAP 484
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 32.3 bits (70), Expect = 0.12
Identities = 25/90 (27%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Frame = +1
Query: 751 GXXPPPPPXHTXXXXXXXXXXXRXXGGXXXXXX--HXPPXVPHXPPPPXXXXNFXSSPPX 924
G PPPP H G H P H PPPP PP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG-EHMPPPPMHHEPGEHMPPP 314
Query: 925 QXKQXXXXPXPPPPPKXXXXXPPPXPPPXK 1014
PPPP P PPP K
Sbjct: 315 PMHHEPGEHMPPPPMHHEPGEHMP-PPPFK 343
Score = 31.9 bits (69), Expect = 0.16
Identities = 23/87 (26%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
Frame = +1
Query: 751 GXXPPPPPXHTXXXXXXXXXXXRXXGGXXXXXX--HXPPXVPHXPPPPXXXXNFXSSPPX 924
G PPPP H G H P H PPPP PP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPG-EHMPPPPMHHEPGEHMPPP 262
Query: 925 QXKQXXXXPXPPPPPKXXXXXPPPXPP 1005
PPPP P PP
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 31.9 bits (69), Expect = 0.16
Identities = 23/87 (26%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
Frame = +1
Query: 751 GXXPPPPPXHTXXXXXXXXXXXRXXGGXXXXXX--HXPPXVPHXPPPPXXXXNFXSSPPX 924
G PPPP H G H P H PPPP PP
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG-EHMPPPPMHHEPGEHMPPP 275
Query: 925 QXKQXXXXPXPPPPPKXXXXXPPPXPP 1005
PPPP P PP
Sbjct: 276 PMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 31.9 bits (69), Expect = 0.16
Identities = 23/87 (26%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
Frame = +1
Query: 751 GXXPPPPPXHTXXXXXXXXXXXRXXGGXXXXXX--HXPPXVPHXPPPPXXXXNFXSSPPX 924
G PPPP H G H P H PPPP PP
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG-EHMPPPPMHHEPGEHMPPP 288
Query: 925 QXKQXXXXPXPPPPPKXXXXXPPPXPP 1005
PPPP P PP
Sbjct: 289 PMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 31.9 bits (69), Expect = 0.16
Identities = 23/87 (26%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
Frame = +1
Query: 751 GXXPPPPPXHTXXXXXXXXXXXRXXGGXXXXXX--HXPPXVPHXPPPPXXXXNFXSSPPX 924
G PPPP H G H P H PPPP PP
Sbjct: 243 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG-EHMPPPPMHHEPGEHMPPP 301
Query: 925 QXKQXXXXPXPPPPPKXXXXXPPPXPP 1005
PPPP P PP
Sbjct: 302 PMHHEPGEHMPPPPMHHEPGEHMPPPP 328
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.12
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 956 PPPPPKXXXRAPPPPPPP 1009
PPPPP + PPPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
Score = 31.1 bits (67), Expect = 0.27
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 956 PPPPPKXXXRAPPPPPPP 1009
PPPP PPPPPPP
Sbjct: 13 PPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 868 PHXPPPPXXXXNFXSSPPXQXKQXXXXPXPPPPP 969
P PPPP F PP Q P PPPPP
Sbjct: 6 PGNPPPPPPPPGF--EPPSQ-------PPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.63
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 854 PPPXXXTXPHPPXGRXIFXPPPQXKXNXXXGXRRPPPPPKXXXRAPPPPPP 1006
PP P PP + PPP G PPPP AP P P
Sbjct: 1699 PPQMSAPTPPPPP---MSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 856 PPXVPHXPPPPXXXXNFXSSPPXQXKQXXXXPXPPPPPKXXXXXPPPXPP 1005
PP P PP +PP P PP P PPP P
Sbjct: 1690 PPVRPQSAAPPQMS---APTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.83
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +2
Query: 854 PPPXXXTXPHPPXGRXIFXPPPQXKXNXXXGXRRPPPPPKXXXRAPPPP 1000
PPP T P P P P N PPPP + P PP
Sbjct: 239 PPPPPPTLP-PQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 916 PPXQXKQXXXXPXPPPPPKXXXXXPPPXPP 1005
P KQ P PPPPP PP PP
Sbjct: 225 PTYTPKQADPLPAPPPPP------PPTLPP 248
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +1
Query: 856 PPXVPHXPPPPXXXXNFXSSPPXQXKQXXXXPXPPPPPKXXXXXPPPXPPP 1008
PP P P P S+PP PP P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = +1
Query: 856 PPXVPHXPPPPXXXXNFXSS--PPXQXKQXXXXPXPPPP-PKXXXXXPPPXPPP 1008
PP PP P SS PP Q P P P PP PPP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 3/55 (5%)
Frame = +3
Query: 855 PPXXXXXPPTPPXXAKFXF-LPPXTXKTXXXXXX--APPPPQKXXXXPPPXPPPP 1010
PP PP P LPP AP P PP PPPP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 959 PPPPKXXXRAPPPPPPP 1009
PPPP APP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 957 PPPPQKXXXXPPPXPPP 1007
PPPP PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -3
Query: 1001 GXGGGXXXXFLGGGGGXGXXXXCFXCXGGEEXKFXXXXGGGGXXGTXGG 855
G GG F GG GG F GG + G GG G GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = -1
Query: 592 GXGXPPPXXX--GGXGGRXSPPKXXGGEXXXXXXXXFXXXXPPXXGGGXGG 446
G G PPP GG GG GG P GGG GG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/81 (24%), Positives = 22/81 (27%)
Frame = +3
Query: 360 PPPPPXXGEKXFGXPXAPQKXRGXSXXGAPPXPPPXXGGXXXXXXXXXXXXXSPPXXLGG 539
PP P G P G PP P P G +PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG-----VPPVPPPSEAPPVPKPS 1204
Query: 540 EXLPPXPPXXXGGGXPXPXKG 602
+PP PP P P G
Sbjct: 1205 VGVPPVPPPSTAPPVPTPSAG 1225
Score = 26.2 bits (55), Expect = 7.8
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 854 PPPXXXTXPHPPXGRXIFXPPPQXKXNXXXGXRRPPPPPKXXXRAPPPPPP 1006
P P P P P P PP PK APP P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 26.2 bits (55), Expect = 7.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 854 PPPXXXTXPHPPXGRXIFXPPPQXKXNXXXGXRRPPPPPKXXXRAPPPPPP 1006
PP P P G PPP PP P +APP P P
Sbjct: 1193 PPSEAPPVPKPSVGVPPV-PPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +1
Query: 859 PXVPHXPPPPXXXXNFXSSPPXQXKQXXXXPXP--PPPP 969
P P PP P + SSP + P P PPPP
Sbjct: 356 PEKPRLPPRPSHTLSELSSPALTSENLSSKPSPLFPPPP 394
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein Lsb1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = +2
Query: 845 KNTPPPXXXTXPHPPXGRXIFXPPPQXKXNXXXGXRRPPPPPKXXXRAPPPP 1000
K PPP +PP PP Q + + P PP + +AP P
Sbjct: 203 KAQPPPPPPQQNYPPAASSS-APPMQYQQTAYPPQQAPYPPVQAYPQAPQQP 253
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.151 0.536
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,791,919
Number of Sequences: 5004
Number of extensions: 54155
Number of successful extensions: 516
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 557214894
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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