Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_D22
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1361 - 26398987-26399019,26399320-26399387,26399458-263995... 105 6e-23
09_02_0105 - 4337047-4337079,4337175-4337242,4337323-4337425,433... 102 3e-22
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 34 0.17
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 0.93
02_05_1258 + 35290183-35290198,35290292-35290599,35290844-352909... 31 0.93
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.8
01_01_0082 + 625198-625719 30 2.8
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 29 3.7
05_06_0097 + 25548272-25548664 29 4.9
02_02_0579 + 11755361-11755545,11755695-11755763,11755904-11756420 29 4.9
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 29 4.9
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 29 6.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 8.6
04_03_0620 - 18088287-18088495,18089174-18089210,18089315-180893... 28 8.6
03_03_0217 + 15500943-15502196 28 8.6
>08_02_1361 -
26398987-26399019,26399320-26399387,26399458-26399560,
26399658-26399888,26400791-26400826,26400891-26400931,
26401028-26401064,26401158-26401160
Length = 183
Score = 105 bits (251), Expect = 6e-23
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = +2
Query: 293 QSSLAQHRGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRA 472
+S + +GRWP KSA F+L LL+NAESNAD K LDVD L + HIQVN+A RRRTYRA
Sbjct: 86 KSRQSNGQGRWPAKSARFILDLLKNAESNADVKGLDVDNLFVSHIQVNQAQKQRRRTYRA 145
Query: 473 HGRINPYMSSP 505
HGRINPYMSSP
Sbjct: 146 HGRINPYMSSP 156
Score = 67.7 bits (158), Expect = 1e-11
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 106 LRNHAKRVVQTSVVHF-KNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 282
LR H K +V V NT ETA A+RK+PL +A RYL++VI K+ IPFRR+ GGVGR
Sbjct: 22 LRVHFKVIVFARFVQCCSNTRETAFALRKLPLVKAKRYLEDVIAHKQAIPFRRYCGGVGR 81
Query: 283 CAQAK 297
AQ K
Sbjct: 82 TAQVK 86
Score = 36.3 bits (80), Expect = 0.033
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 75 MGRYSREPDNPAKSCKARGSNLR 143
MG+YS EP NP KS KA G +LR
Sbjct: 1 MGKYSTEPSNPTKSAKAMGRDLR 23
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 489 PTCRLPGHIEVCLSEREDAVARVAPTDDAP 578
P P H+E+ LSE+E+AV + T AP
Sbjct: 151 PYMSSPCHVELILSEKEEAVKKEPETTIAP 180
>09_02_0105 -
4337047-4337079,4337175-4337242,4337323-4337425,
4337507-4337737,4339307-4339347,4339437-4339473,
4339603-4339605
Length = 171
Score = 102 bits (245), Expect = 3e-22
Identities = 47/64 (73%), Positives = 53/64 (82%)
Frame = +2
Query: 314 RGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPY 493
+GRWP KSA F+L LL+NAESNA+ K LDVD L + HIQVN+A RRRTYRAHGRINPY
Sbjct: 81 QGRWPAKSARFILDLLKNAESNAEVKGLDVDTLYVSHIQVNQAQKQRRRTYRAHGRINPY 140
Query: 494 MSSP 505
MSSP
Sbjct: 141 MSSP 144
Score = 77.0 bits (181), Expect = 2e-14
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +1
Query: 145 VHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAK 297
VHFKNT ETA AIRK+PL +A RYL++VI K+ IPFRR+ GGVGR AQAK
Sbjct: 24 VHFKNTRETAFAIRKLPLGKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAK 74
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 75 MGRYSREPDNPAKSCKARGSNLR 143
M +YSRE +NP KS KA G +LR
Sbjct: 1 MVKYSREANNPTKSSKAMGRDLR 23
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +1
Query: 670 FXPSPPPXXXPXXPXXXPXXXXXXXPGARXXXPXXGGVXXGPPPXXNPXPLGXXWAXPPP 849
F P PPP P P P P + PPP P P+ + PPP
Sbjct: 561 FSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPP 620
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +1
Query: 676 PSPPPXXXPXXPXXXPXXXXXXXPGARXXXPXXGGVXXGPPPXXNPXPLGXXWAXPPP 849
PSPPP P P P P P V PPP P L PPP
Sbjct: 600 PSPPPP--PPPPPILPNRSVPPPPPPPPPLPNH-SVLPPPPPPPPPPSLPNRLVPPPP 654
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Frame = +1
Query: 676 PSPPPXXXPXXPXXXPXXXXXXXPGA---RXXXPXXGGVXXGPPPXXNPXPLGXXWAXPP 846
P PPP P P P P R P GG PPP P G + PP
Sbjct: 265 PRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPP--PLANGPPRSIPP 322
Query: 847 P 849
P
Sbjct: 323 P 323
>02_05_1258 +
35290183-35290198,35290292-35290599,35290844-35290939,
35291067-35291144,35291224-35291400,35292738-35292806,
35292917-35293093
Length = 306
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 781 PPXXRGXXXGPRGXXXXXXXGXXXGXGXGXXGGGRG 674
PP RG G RG G G G G GGRG
Sbjct: 3 PPRGRGFGRGGRGDGGGRSGGGGRGFGRGGDSGGRG 38
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +1
Query: 676 PSPPPXXXPXXPXXXPXXXXXXXPGARXXXPXXGGVXXGPPPXXNPXPLGXXWAXPPPXX 855
P+PPP P P P A P G PP P P PPP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPP--PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP 368
Query: 856 IXXGKK 873
GKK
Sbjct: 369 PPGGKK 374
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +1
Query: 676 PSPPPXXXPXXPXXXPXXXXXXXPGARXXXPXXGGVXXGPPPXXNPXPLGXXWAXPPP 849
P PPP P P P P A+ P GP P P P G PPP
Sbjct: 328 PPPPPKAAPPPP---PPKGPPPPPPAKGPPPPPP--PKGPSPPPPPPPGGKKGGPPPP 380
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +1
Query: 676 PSPPPXXXPXXPXXXPXXXXXXXPGARXXXPXXGGVXXGPPPXXNPXPLGXXWAXPPPXX 855
P PP P P P + P GG GPPP P P G P
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP---PPPKGGASRPPAAPG 394
Query: 856 IXXG 867
+ G
Sbjct: 395 VPTG 398
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/66 (27%), Positives = 21/66 (31%)
Frame = +1
Query: 676 PSPPPXXXPXXPXXXPXXXXXXXPGARXXXPXXGGVXXGPPPXXNPXPLGXXWAXPPPXX 855
P+PPP P A P G GPPP P G PPP
Sbjct: 331 PAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPP--PGAAGRGGGGPPPPA 388
Query: 856 IXXGKK 873
+ G +
Sbjct: 389 LPGGPR 394
>01_01_0082 + 625198-625719
Length = 173
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +1
Query: 670 FXPSPPPXXXPXXPXXXPXXXXXXXPGARXXXPXXGGVXXGPPPXXNPXP 819
+ P PPP P P P GG P P NP P
Sbjct: 64 YYPPPPPVYYPPPSPPPVAYPPPTTPSTNCPPPPYGGGGYNPTPSYNPTP 113
>09_04_0308 + 16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 392 FCCQRLIQRSSITARGIRRISWASDPCVVPNCFA*AQRPTPP 267
F C RL +S+ RG+ I WA++ V P A +P P
Sbjct: 1129 FNCHRLADKSNFKKRGLLGIEWAANGPVQPFIQAGPSKPKYP 1170
>05_06_0097 + 25548272-25548664
Length = 130
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 425 IQVNRAPCLRRRTYRAHGRINPYMSSPWPHRSMSQRTRRCCRQGSPY**C 574
I V RAP RR + HG P + PH ++ R RRC + + + C
Sbjct: 56 IPVTRAPTTRRIS---HGSTAPAAAFVPPHELVAARARRCSEERAAFSVC 102
>02_02_0579 + 11755361-11755545,11755695-11755763,11755904-11756420
Length = 256
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 437 RAPCLRRRTYRAHGRINPYMSSPWPHRSMSQRTRRCCRQ 553
RA LRRR GR++P ++ P SM +RR CR+
Sbjct: 217 RAATLRRRARHRAGRLSPSPATAAP-ASMPAASRRVCRR 254
>01_05_0279 + 20318440-20318688,20318785-20318931,20319449-20319611,
20319770-20319887,20320607-20320676,20320774-20320854,
20320924-20320959,20321129-20321149,20321586-20321642,
20321716-20321827,20321905-20322178,20322454-20322556,
20323244-20323459,20324615-20324665,20325339-20327963
Length = 1440
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 329 KKSAEFLLQLLRNAE--SNADNKTLDVDRLVIDHIQVNRAPCLR 454
K EF Q+ + +E S + + L + + I H+ + APCLR
Sbjct: 1033 KSKEEFFCQVYKGSEACSIENTRRLSIQNVSIQHLSGSSAPCLR 1076
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Frame = +1
Query: 670 FXPSPPPXXXPXX---PXXXPXXXXXXXPGARXXXPXXGGVXXGPPPXXNPXPLGXXWAX 840
F S PP P P P P A P V PP P P+ +
Sbjct: 157 FAASVPPSQGPFASAQPPFRPPPSLVQSPTASGMAPPSAYVRPPPPVQSQPPPMQGFYGG 216
Query: 841 PPP 849
PPP
Sbjct: 217 PPP 219
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/58 (27%), Positives = 19/58 (32%)
Frame = +1
Query: 676 PSPPPXXXPXXPXXXPXXXXXXXPGARXXXPXXGGVXXGPPPXXNPXPLGXXWAXPPP 849
P PPP P P P P + P + PPP P + PPP
Sbjct: 54 PPPPPPPGPPPPHQ-PQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPP 110
>04_03_0620 -
18088287-18088495,18089174-18089210,18089315-18089395,
18089771-18089838,18093361-18094219
Length = 417
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 551 GDSIFAFAETYFDVARETTCRG*CDREHGMYVC 453
GD++ A E DV E +CR R G+++C
Sbjct: 357 GDAVVAVVEDAVDVVDEASCRLIYQRTRGVHLC 389
>03_03_0217 + 15500943-15502196
Length = 417
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +3
Query: 435 IARPAYADVHTVLTVASTPTCRLPGHIEVCLSEREDAVARVAPTDDAPSEXKAFQEK 605
+A PA A VL P H V + E + + +P+D P E +E+
Sbjct: 198 LADPAVAAAGHVLAADLAAQAEAPNHTVVNVDTPESTIGKDSPSDQQPPESLTAEER 254
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,872,544
Number of Sequences: 37544
Number of extensions: 545238
Number of successful extensions: 2064
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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