Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_D17
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0499 - 4166891-4166942,4167191-4167510                           31   1.6  
02_05_0272 - 27348537-27348728,27349035-27349192,27349292-273493...    29   3.7  
09_04_0323 - 16679565-16679939,16680328-16680660,16680721-166810...    29   6.5  
08_02_0376 - 16475216-16475608                                         28   8.6  
08_02_0287 + 15347145-15349604                                         28   8.6  
03_06_0673 - 35446537-35446629,35447001-35448548                       28   8.6  

>05_01_0499 - 4166891-4166942,4167191-4167510
          Length = 123

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 463 PLALRSWLLLWNKLTLPATPSCSPKPGMRXPVRLSPCPFTLSRASP 326
           PLALR   LL N +     PS SP+   +   R  P P + + ASP
Sbjct: 9   PLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASP 54


>02_05_0272 -
           27348537-27348728,27349035-27349192,27349292-27349323,
           27349420-27349514,27349614-27349687,27349800-27349878,
           27350015-27350078,27350156-27350218,27350300-27350442,
           27350566-27350703,27350792-27350913,27350993-27351158,
           27351276-27351398,27351609-27351680,27351773-27351880,
           27352481-27352597,27352727-27352865,27352974-27353080,
           27353167-27353276,27353892-27354025,27354106-27354255,
           27354329-27354549,27354647-27355318
          Length = 1092

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/30 (53%), Positives = 16/30 (53%)
 Frame = +1

Query: 514 QHAGRRSGLHVQTEGGRIVERGAL*RHQPG 603
           Q AGR  G H Q  GGR   RG    HQPG
Sbjct: 53  QQAGRGGGQH-QGRGGRYQGRGGPTSHQPG 81


>09_04_0323 -
           16679565-16679939,16680328-16680660,16680721-16681032,
           16683590-16683825,16683972-16684239
          Length = 507

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 302 HKLSAASAGARSGQCKRARAEPDRXPHSRL 391
           ++ +++S+G RS  C R R  P R PH  +
Sbjct: 471 YQSTSSSSGIRSWSCPRRRCTPVRLPHRHM 500


>08_02_0376 - 16475216-16475608
          Length = 130

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +3

Query: 459 KGVRDQETRPAPFPTRPTSTRWAA 530
           +  +++ET  AP+  RP+S+RW A
Sbjct: 57  RNAKEEETTVAPWRWRPSSSRWPA 80


>08_02_0287 + 15347145-15349604
          Length = 819

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 372 RSGSARARLHCPERAPAEAALSLWRSLKSA 283
           RSG   A     ER P + A ++WRSL SA
Sbjct: 673 RSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702


>03_06_0673 - 35446537-35446629,35447001-35448548
          Length = 546

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 632 NCFRSPSSSLXFNAGFQKFDTPFYRSSWEPQCGNSPSR 745
           NC  S  S+L  +    K+  P Y S W+   G +PS+
Sbjct: 143 NCHISVISALVLSGAVPKYIVPEYNSGWDIAGGITPSQ 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,855,628
Number of Sequences: 37544
Number of extensions: 481994
Number of successful extensions: 1510
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)