Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_D13
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    113   6e-27
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    26   1.7  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   6.7  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   6.7  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  113 bits (272), Expect = 6e-27
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +3

Query: 132 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 299
           L VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 15  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score =  113 bits (272), Expect = 6e-27
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +3

Query: 132 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 299
           L VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 91  LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146



 Score =  113 bits (272), Expect = 6e-27
 Identities = 54/56 (96%), Positives = 55/56 (98%)
 Frame = +3

Query: 132 LXVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 299
           L VEPSDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 167 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 79  ESEDANFRKDPHGQDHH 129
           ESE  N RK PH QD H
Sbjct: 50  ESEGGNLRKYPHFQDIH 66


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 572 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 486
           L GTY   ++F    +V L  VV   HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 572 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 486
           L GTY   ++F    +V L  VV   HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,884
Number of Sequences: 2352
Number of extensions: 14187
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)