Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_D12
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   6.5  
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    29   6.5  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   6.5  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 793 PXPQXPLGKXPXXXAPXPAIXPPXXSPPXXP 885
           P P+ P    P   AP P+  PP   PP  P
Sbjct: 125 PPPRPPPQPTPSAPAPPPSYGPPQTPPPRPP 155



 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/82 (25%), Positives = 28/82 (34%)
 Frame = +3

Query: 630 QSXPXCIPRPPX*QHQXAMVLXSPAQSQNXXXXXXXPSPNSTMPWPPARILXXXPXXPXP 809
           Q+ P   P PP            P Q+Q        P+P++  P PP+      P    P
Sbjct: 72  QTRPPPPPPPPQPTPPAPRPSYGPPQTQ-PPRPPPQPTPSAPAPPPPSYGPPQTPPPRPP 130

Query: 810 PWQTPXXXRPXXCHXTPXXXTP 875
           P  TP    P   +  P    P
Sbjct: 131 PQPTPSAPAPPPSYGPPQTPPP 152


>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
           protein.
          Length = 3539

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +2

Query: 110 ACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLS 223
           +CSP + ++     T  T+TS  N T  SS ATTTV S
Sbjct: 747 SCSPSSSSASTLLSTA-TRTSMSNSTCTSSAATTTVSS 783


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 793 PXPQXPLGKXPXXXAPXPAIXPPXXSPPXXP 885
           P P+ P    P   AP P+  PP   PP  P
Sbjct: 125 PPPRPPPQPTPSAPAPPPSYGPPQTPPPRPP 155



 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/82 (25%), Positives = 28/82 (34%)
 Frame = +3

Query: 630 QSXPXCIPRPPX*QHQXAMVLXSPAQSQNXXXXXXXPSPNSTMPWPPARILXXXPXXPXP 809
           Q+ P   P PP            P Q+Q        P+P++  P PP+      P    P
Sbjct: 72  QTRPPPPPPPPQPTPPAPRPSYGPPQTQ-PPRPPPQPTPSAPAPPPPSYGPPQTPPPRPP 130

Query: 810 PWQTPXXXRPXXCHXTPXXXTP 875
           P  TP    P   +  P    P
Sbjct: 131 PQPTPSAPAPPPSYGPPQTPPP 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,443,385
Number of Sequences: 53049
Number of extensions: 654815
Number of successful extensions: 2337
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2275
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)