Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_D09
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 30 2.1
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 30 2.1
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 24 5.3
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 29 6.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.3
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 29 6.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 6.3
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 620 PPAXXRHPPPPXXPPLXXIPHHXPAXXPXQKXXXRKXXPAPGP 748
PP PPPP PL IP + + P+PGP
Sbjct: 257 PPVLSIPPPPPPNIPLPTIPQEVQSPPSPRPTSVPPPIPSPGP 299
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +2
Query: 620 PPAXXRHPPPPXXPPLXXIPHHXPAXXPXQKXXXRKXXPAPGP 748
PP PPPP PL IP + + P+PGP
Sbjct: 257 PPVLSIPPPPPPNIPLPTIPQEVQSPPSPRPTSVPPPIPSPGP 299
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 638 HPPPPXXPPLXXIPHHXPAXXP 703
HP PP PP+ I H P+ P
Sbjct: 942 HPSPPVPPPIPAIRHRTPSPPP 963
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 620 PPAXX-RHPPPPXXPPLXXIPHHX-PAXXPXQKXXXRKXXPAPGPP 751
PPA +H P PPL P + P P + PAP PP
Sbjct: 68 PPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPP 113
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +2
Query: 620 PPAXXRHP----PPPXXPPLXXIPHHXPAXXPXQKXXXRKXXPAPGPP 751
PP +P P P PP H PA P + P P PP
Sbjct: 51 PPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPP 98
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 620 PPAXXRHPPPPXXPP 664
PP PPPP PP
Sbjct: 135 PPTPAAPPPPPPPPP 149
Score = 23.4 bits (48), Expect(2) = 5.3
Identities = 10/32 (31%), Positives = 11/32 (34%)
Frame = +2
Query: 641 PPPPXXPPLXXIPHHXPAXXPXQKXXXRKXXP 736
PPPP PP P P + R P
Sbjct: 143 PPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCP 174
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 623 PAXXRHPPPPXXPPLXXIPHHXP 691
P HPPPP PP+ H P
Sbjct: 102 PPQQHHPPPPSPPPVAETIQHQP 124
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +2
Query: 605 CXRXXPPAXXRHPPPPXXPPLXXIPHHXPAXXPXQKXXXRKXXPAPGPP 751
C PP PPP PP +P P P Q P P PP
Sbjct: 22 CCSMGPPPCPPPPPPMCAPP--PLPCPPPPICPPQFCPPPPMCPPPPPP 68
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 638 HPPPPXXPPLXXIPHH 685
H PPP PPL PHH
Sbjct: 625 HVPPPPPPPLVLRPHH 640
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 641 PPPPXXPPLXXIPHHXPAXXPXQKXXXRKXXPAP 742
PPPP PPL I P P K P P
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 641 PPPPXXPPLXXIPHHXPA-XXPXQKXXXRKXXPAPGPP 751
PPPP PPL P+ + R PAP PP
Sbjct: 4 PPPPPPPPLLPSGEILPSRKWKTEDAPRRNNHPAPAPP 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,643,502
Number of Sequences: 27780
Number of extensions: 124420
Number of successful extensions: 489
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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