Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_D03
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           33   0.23 
03_06_0471 + 34169562-34169892,34170121-34170347                       31   0.91 
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   3.7  
07_03_1300 - 25609670-25609915,25610006-25610130,25610240-256104...    29   6.4  
01_05_0641 - 23881429-23881836                                         29   6.4  
01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787...    29   6.4  
08_02_1289 - 25923916-25924586,25925148-25926630                       28   8.5  
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747           28   8.5  

>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = +3

Query: 135 PTLKTPLRVVENADSGNGYXPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQG 305
           P+   P    +  +    Y P  + P  V PP  Y P  +G  P     N + Y + P G
Sbjct: 376 PSTPLPPAAPQQPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVG 434

Query: 306 RPYFKPTPFPGARG 347
           RP   P P  GA G
Sbjct: 435 RPNSGPPPSYGAGG 448


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +3

Query: 189 YXPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPG 338
           Y P    P    PP  Y P+  GY P   GAY       +P + P  +PG
Sbjct: 56  YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/56 (26%), Positives = 17/56 (30%)
 Frame = +1

Query: 706 FGXXXPXPKXXSPPPXXXFFXXPXXGXXXXXXXXXXXKTPPPPGXXXFXXLXPPPP 873
           FG   P  +   PPP   +   P                PPPP         PPPP
Sbjct: 72  FGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPP 127


>07_03_1300 -
           25609670-25609915,25610006-25610130,25610240-25610441,
           25610533-25610631,25610735-25610821,25611120-25611431
          Length = 356

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 873 GGGGXQXXKXXGXGGGGGF 817
           GGGG +     G GGGGGF
Sbjct: 28  GGGGGEVAAELGCGGGGGF 46


>01_05_0641 - 23881429-23881836
          Length = 135

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -1

Query: 873 GGGGXQXXKXXGXGGGGG 820
           GGGG +  K  G GGGGG
Sbjct: 38  GGGGGETGKPDGGGGGGG 55


>01_01_0995 +
           7875273-7875495,7876196-7876274,7876422-7876536,
           7878507-7878761
          Length = 223

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -1

Query: 873 GGGGXQXXKXXGXGGGGG 820
           GGGG +  K  G GGGGG
Sbjct: 3   GGGGDEREKAKGGGGGGG 20


>08_02_1289 - 25923916-25924586,25925148-25926630
          Length = 717

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -2

Query: 461 ALQYVYLXIPLT*I---HMKF*NILLIHYFVINFLRYSLLPTASTRERGRLEV 312
           ALQY+Y  +P+  +   H+K  NILL   F      YSL+P  +     +L V
Sbjct: 519 ALQYLYDELPMLTVPHGHLKSSNILLNDRFEPLLTDYSLVPVMNQSHSAQLMV 571


>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
          Length = 368

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -1

Query: 873 GGGGXQXXKXXGXGGGGG 820
           GGGG +  K  G GGGGG
Sbjct: 215 GGGGKKKGKKGGGGGGGG 232


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,680,296
Number of Sequences: 37544
Number of extensions: 547639
Number of successful extensions: 4530
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4003
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)