Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_D01
(785 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 44 2e-05
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 42 1e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 42 1e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 40 5e-04
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 38 0.001
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 37 0.004
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.035
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.046
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.061
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 32 0.11
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.57
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 29 0.76
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.00
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 27 4.0
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.3
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 26 7.0
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 44.4 bits (100), Expect = 2e-05
Identities = 22/44 (50%), Positives = 22/44 (50%)
Frame = -1
Query: 680 GGGGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGGGEXLGXXGGG 549
GG GG GG GGF GG G GGG G G G G GGG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/44 (50%), Positives = 22/44 (50%)
Frame = -1
Query: 683 GGGGGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGGGEXLGXXGG 552
GGG GG GG GGF GG G GGG G G G G GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 40.3 bits (90), Expect = 3e-04
Identities = 23/51 (45%), Positives = 23/51 (45%)
Frame = -1
Query: 680 GGGGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGGGEXLGXXGGGXEKKXGG 528
GG G GG GGF GG G GG G G G LG GGG GG
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/44 (47%), Positives = 21/44 (47%)
Frame = -1
Query: 683 GGGGGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGGGEXLGXXGG 552
GGG GG G GGF G GG G G G GGG G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG-GFEGG 236
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/53 (43%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 683 GGGGGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGGGE-XLGXXGGGXEKKXGG 528
GGG GG GG GG G G GG G G GG G GG E GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1
Query: 683 GGGGGGXXGGXGGFXGGGGXXGGGG 609
GGG GG GG GGF GG G GG G
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 33.1 bits (72), Expect = 0.046
Identities = 20/42 (47%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -1
Query: 671 GGXXGGXGGFXGG-GGXXGGGGEXXGF-XFXGGGEXLGXXGG 552
G GG GGF GG GG G G GF F G G G GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG 225
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 553 PPXXPXXSPPPQXKNPXXSPPPPXXPPPPXXPP 651
PP P + PPQ P PPP PPPP PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 35.9 bits (79), Expect = 0.007
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 499 TXPKXXLXXXPPXFFSXPPPXXPXXSPPPQXKNPXXSPPPPXXPPP 636
T P PP + PP P PPP P + PP PPP
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 35.1 bits (77), Expect = 0.011
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 544 SXPPPXXPXXSPPPQXKNPXXSPPPPXXPPPPXXPP 651
S PP +PPP P PPPP PP P PP
Sbjct: 1696 SAAPPQMSAPTPPPP---PMSVPPPPSAPPMPAGPP 1728
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 532 PXFFSXPPPXXPXXSPPPQXKNPXXSPPPPXXPPPPXXPP 651
P + P P PPP P S PP PP PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 41.5 bits (93), Expect = 1e-04
Identities = 29/86 (33%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Frame = +1
Query: 394 PPLXXXPPRXXTPFWETXXGPPQFFXKXXSPXSXQTXPKXXLXXXPPXFFSXPP---PXX 564
PP PP + PP+ SP S P PP S PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKA----PPIPSSLPPPAQPAA 179
Query: 565 PXXSPPPQXKNPXXSPP-PPXXPPPP 639
P SPP P PP PP PPPP
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 32.7 bits (71), Expect = 0.061
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +1
Query: 481 SPXSXQTXPKXXLXXXPPXFFSXPP-PXXPXXSPPPQXKNPXXSPPPPXXPPPPXXP 648
+P S P PP S PP P P SP P +PP P PPP P
Sbjct: 123 APPSAPAPPTPQSELRPPT--SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 29.5 bits (63), Expect = 0.57
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Frame = +1
Query: 532 PXFFSXPPPXXPXXSPPPQXKNPXXSPP-----PPXXPP-PPXXPP 651
P S PP PP Q P SPP P PP PP PP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 544 SXPPPXXPXXSPPPQXKNPXXSPPPPXXPPPP 639
S PP P P P S PP PPP
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPP 152
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Frame = +1
Query: 544 SXPPPXXPXXSPPPQXKNPXXS--PPPPXXPPPPXXPP 651
S PPP P P P S PPP P PP
Sbjct: 148 SIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 39.5 bits (88), Expect = 5e-04
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 680 GGGGGXXGGXGGFXGG-GGXXGGGGEXXGFXFXGGGEXLGXXGGGXEKKXGGXXXR 516
GG GG GG GGF GG GG GG G G G G GG + G R
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Score = 39.5 bits (88), Expect = 5e-04
Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 680 GGGGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGG-GEXLGXXGGGXEKKXG 531
GG GG GG GGF GG G GGG GG G G GG + G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 33.9 bits (74), Expect = 0.027
Identities = 21/46 (45%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -1
Query: 683 GGGGGGXXGGXGGFXGG--GGXXGGGGEXXGFXFXGGGEXLGXXGG 552
GG GGG G GG GG GG G GG G GG G GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG-GAKGG 70
Score = 30.7 bits (66), Expect = 0.25
Identities = 21/53 (39%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 683 GGGGGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGGGE-XLGXXGGGXEKKXGG 528
GG GG GG GG GG G GG G GG G GG GG
Sbjct: 19 GGFNGG-RGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/56 (41%), Positives = 23/56 (41%)
Frame = -1
Query: 683 GGGGGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGGGEXLGXXGGGXEKKXGGXXXR 516
GG GG G GGF G GGG GF GGG G GG GG R
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGF---GGGSRGGSRGGFRGGSRGGFRGR 193
Score = 35.5 bits (78), Expect = 0.009
Identities = 24/56 (42%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -1
Query: 689 KXGGGGGGXXGGXGGFXGG-GGXXGG-GGEXXGFXFXGGGEXLGXXGGGXEKKXGG 528
K G GG GGF GG GG GG GG G GGG G GG GG
Sbjct: 128 KGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRG--GFGGGSRGGFGGGSRGGSRGG 181
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 689 KXGGGGGGXXGGXGGFXGGGGXXGGGGEXXGF 594
+ G GGG G GG GG GG GF
Sbjct: 159 RGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGF 190
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = -1
Query: 674 GGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGGGEXLGXXGGG 549
GGG GG GGF G GG G GG G GG G G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNPNRG 487
Score = 32.3 bits (70), Expect = 0.081
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -1
Query: 689 KXGGGGGGXXGGXGGFXGGGGXXGGG 612
+ G GG G GG GGF GG G GG
Sbjct: 453 RGGFGGRGGFGGRGGFGGGRGRGRGG 478
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 683 GGGGGG--XXGGXGGFXGGGGXXGGGGEXXG 597
GG GG GG GGF G GG GG G G
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGFGGGRGRGRG 477
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.5 bits (73), Expect = 0.035
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 553 PPXXPXXSPPPQXKNPXXSPPPPXXPPP 636
PP P PPP P PPPP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP--PPP 30
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 544 SXPPPXXPXXSPPPQXKNPXXSPPPPXXPP 633
S PP P PPP + P PPPP PP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPP--PP 30
Score = 30.3 bits (65), Expect = 0.33
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 565 PXXSPPPQXKNPXXSPPPPXXPPPP 639
P +PPP P PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 595 NPXXSPPPPXXPPPPXXPP 651
NP PPPP PP PP
Sbjct: 8 NPPPPPPPPGFEPPSQPPP 26
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +1
Query: 574 SPPPQXKNPXXSPP---PPXXPPPPXXP 648
S PP P PP PP PPPP P
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 21.8 bits (44), Expect(2) = 9.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 689 SXXPPPPPP 715
S PPPPPP
Sbjct: 22 SQPPPPPPP 30
Score = 21.4 bits (43), Expect(2) = 9.8
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 698 PPPPPPXXF 724
PPPPPP +
Sbjct: 24 PPPPPPPGY 32
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.046
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
Frame = +1
Query: 529 PPXFFSXPPPXXPXXSPPPQ--XKNPXXSPPPP----XXPPPPXXPP 651
PP P P PPP P PPPP PPPP PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +1
Query: 505 PKXXLXXXPPXFFSXPPPXXPXXSPPPQXKNPXXSP--PPPXXPPPP 639
P + P PPP PPP P + PPP PPPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = +1
Query: 550 PPPXXPXXSPPPQXKNPXXSPPP-PX--XPPPPXXPP 651
PPP P P P PPP P PPPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.7 bits (71), Expect = 0.061
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 529 PPXFFSXPPPXXPXXSPPPQXKNPXXSPPPPXXPPPP 639
P S PP P + P P PPP PPPP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 29.5 bits (63), Expect = 0.57
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +1
Query: 529 PPXFFSXPPPXXPXXSPP--PQXKNPXXSPPPPXXPPPPXXPP 651
P ++S P P P+ +P +PPPP PPP PP
Sbjct: 209 PDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPP---PPPTLPP 248
Score = 28.7 bits (61), Expect = 1.00
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 565 PXXSPPPQXKNPXXSPPPPXXPPPPXXPP 651
P PP P S P PPPP PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 31.9 bits (69), Expect = 0.11
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = +1
Query: 484 PXSXQTXPKXXLXXXPPXFFSXPPPXXPXXSPPPQXKNPXXSPPPPXXPPPPXXP 648
P + P+ L PP + P P P PP P P P PP P P
Sbjct: 92 PLLNELVPEEPLPREPP-LPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.57
Identities = 27/116 (23%), Positives = 31/116 (26%), Gaps = 4/116 (3%)
Frame = +1
Query: 316 PXXXPKXXXPXXXTPPFGEKTXGIFPPPLXXXPPRXXTPFWETXXGPPQFFXKXXSPXSX 495
P P P PP + + + P P P P P S
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSV 1147
Query: 496 QTXPKXXLXXXPPX---FFSXPPPXXPXXSPPPQXKNPXXSPP-PPXXPPPPXXPP 651
P PP + PP P PP K PP PP PP P
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/49 (26%), Positives = 16/49 (32%)
Frame = +1
Query: 505 PKXXLXXXPPXFFSXPPPXXPXXSPPPQXKNPXXSPPPPXXPPPPXXPP 651
P + P PP P +PP + P PP PP P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.1 bits (57), Expect = 3.0
Identities = 27/112 (24%), Positives = 32/112 (28%)
Frame = +1
Query: 316 PXXXPKXXXPXXXTPPFGEKTXGIFPPPLXXXPPRXXTPFWETXXGPPQFFXKXXSPXSX 495
P P P TPP + + G P P P G P P
Sbjct: 1037 PSTAPPVPIPTS-TPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
Query: 496 QTXPKXXLXXXPPXFFSXPPPXXPXXSPPPQXKNPXXSPPPPXXPPPPXXPP 651
+ P P + PP P +PP P S P P P PP
Sbjct: 1096 K--PSVAAPPVPKPSVAVPPVPAPSGAPPV----PKPSVAAPPVPVPSGAPP 1141
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 29.1 bits (62), Expect = 0.76
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 9/45 (20%)
Frame = -1
Query: 683 GGGGGGXXGGXGGF-------XGGGGXXGGGGEXXGF--XFXGGG 576
GGG GG GG GG G G GGG GF F GGG
Sbjct: 136 GGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGG 180
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 680 GGGGGXXGGXGGFXGGGGXXGGGGEXXGFXFXGGG 576
G GG G GGF G G GG F G G
Sbjct: 80 GAEGGPGAGFGGFPGAG---PGGARTFHFNMGGPG 111
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 1.00
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +1
Query: 529 PPXFFSXPPPXXPXXSPPPQXKNPXXSPP-PPXXPPPPXXP 648
PP PP P +PP +PP PP P P P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 27.9 bits (59), Expect = 1.7
Identities = 29/108 (26%), Positives = 33/108 (30%), Gaps = 10/108 (9%)
Frame = +1
Query: 358 PPFGEKTXGIFPPPLXXX-------PPRXXTPFWETXXGPPQFFXKXXSPXSXQTXPKXX 516
PP + G PPPL P P PP S T P
Sbjct: 365 PPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP 424
Query: 517 LXXXPPXFFSXPPPXXPXXSP--PPQXKNPXXSPP-PPXXPPPPXXPP 651
PP PP P +P PP + +PP P P P PP
Sbjct: 425 -PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 532 PXFFSXPP-PXXPXXSPPPQXKNPXXSPPPPXXPPP 636
P S PP P S PP+ +P PP PPP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 27.5 bits (58), Expect = 2.3
Identities = 26/124 (20%), Positives = 35/124 (28%), Gaps = 6/124 (4%)
Frame = +1
Query: 298 GXTPTEPXXXPKXXXPXXXTPPFGEKTXGIFPPPLXXXPPRXXTPFWETXXGPPQFFXKX 477
G + P P+ P P + PPP + PP
Sbjct: 262 GTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPP------ 315
Query: 478 XSPXSXQTXPKXXLXXXPPXFFSXPPPXXPXXSP------PPQXKNPXXSPPPPXXPPPP 639
P S + K + PPP P + PPQ ++ PPP P
Sbjct: 316 --PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 640 XXPP 651
PP
Sbjct: 374 RQPP 377
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 553 PPXXPXXSPPPQXKNPXXSPPPPXXPPPPXXP 648
PP P P P P P PP P PP P
Sbjct: 450 PPSAPIAPPLPAGM-PAAPPLPPAAPAPPPAP 480
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Frame = +1
Query: 529 PPXFFSXPPPXXPXXS------PPPQXKNPXXSPPPPXXPPPPXXP 648
PP S PPP P + PPP + S PP PPP P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP---APPPAIP 396
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 553 PPXXPXXSPPPQXKNPXXSPPPPXXPPPP 639
PP P PP + P S P P PPP
Sbjct: 233 PPSIPSSRPPERV--PSLSAPAPPPIPPP 259
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 20 YREFLTIXELWSCQFCK-XTMWARLSC 97
YRE + E W CQ CK + +++++C
Sbjct: 649 YRELMEDAENWQCQHCKAFSYFSQVAC 675
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -1
Query: 689 KXGGGGGG-XXGGXGGFXG-GGGXXGGGG 609
+ GGG G G GGF G GGG GG G
Sbjct: 110 RIGGGHHGPLHGPHGGFGGRGGGRMGGRG 138
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 671 GGXXGGXGGFXGGGGXXGGGGEXXGFXFXGG 579
GG G GGF G GG GG GF GG
Sbjct: 438 GGSFPG-GGFPG-GGFPGGSYNSQGFGMGGG 466
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,988,019
Number of Sequences: 5004
Number of extensions: 31732
Number of successful extensions: 417
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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